Iron in PDB 9c91: Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer
Enzymatic activity of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer
All present enzymatic activity of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer:
1.8.1.2;
Other elements in 9c91:
The structure of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer also contains other interesting chemical elements:
Iron Binding Sites:
The binding sites of Iron atom in the Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer
(pdb code 9c91). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 5 binding sites of Iron where determined in the
Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer, PDB code: 9c91:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
Iron binding site 1 out
of 5 in 9c91
Go back to
Iron Binding Sites List in 9c91
Iron binding site 1 out
of 5 in the Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe603
b:76.1
occ:1.00
|
FE1
|
B:SF4603
|
0.0
|
76.1
|
1.0
|
SG
|
B:CYS434
|
2.3
|
35.4
|
1.0
|
S4
|
B:SF4603
|
2.3
|
63.9
|
1.0
|
S3
|
B:SF4603
|
2.3
|
61.0
|
1.0
|
S2
|
B:SF4603
|
2.3
|
51.5
|
1.0
|
FE4
|
B:SF4603
|
2.7
|
59.6
|
1.0
|
FE2
|
B:SF4603
|
2.7
|
47.4
|
1.0
|
FE3
|
B:SF4603
|
2.7
|
80.5
|
1.0
|
CB
|
B:CYS434
|
3.1
|
27.3
|
1.0
|
CB
|
B:CYS479
|
3.7
|
43.6
|
1.0
|
S1
|
B:SF4603
|
3.9
|
47.1
|
1.0
|
CB
|
B:CYS483
|
3.9
|
35.8
|
1.0
|
N
|
B:GLY478
|
4.0
|
29.7
|
1.0
|
N
|
B:CYS479
|
4.2
|
44.8
|
1.0
|
N
|
B:SER436
|
4.4
|
35.4
|
1.0
|
CA
|
B:SER436
|
4.5
|
33.8
|
1.0
|
CA
|
B:CYS434
|
4.5
|
31.4
|
1.0
|
CB
|
B:THR477
|
4.5
|
27.9
|
1.0
|
C
|
B:GLY478
|
4.5
|
43.4
|
1.0
|
CA
|
B:CYS479
|
4.6
|
31.1
|
1.0
|
CB
|
B:SER436
|
4.6
|
38.4
|
1.0
|
SG
|
B:CYS483
|
4.6
|
61.1
|
1.0
|
CA
|
B:GLY478
|
4.6
|
32.2
|
1.0
|
N
|
B:CYS483
|
4.7
|
41.0
|
1.0
|
CA
|
B:THR477
|
4.7
|
35.9
|
1.0
|
C
|
B:THR477
|
4.8
|
42.7
|
1.0
|
CA
|
B:CYS483
|
4.9
|
36.3
|
1.0
|
N
|
B:VAL435
|
4.9
|
35.8
|
1.0
|
C
|
B:CYS434
|
4.9
|
43.1
|
1.0
|
SG
|
B:CYS440
|
4.9
|
39.4
|
1.0
|
SG
|
B:CYS479
|
5.0
|
45.3
|
1.0
|
|
Iron binding site 2 out
of 5 in 9c91
Go back to
Iron Binding Sites List in 9c91
Iron binding site 2 out
of 5 in the Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe603
b:47.4
occ:1.00
|
FE2
|
B:SF4603
|
0.0
|
47.4
|
1.0
|
SG
|
B:CYS440
|
2.3
|
39.4
|
1.0
|
S3
|
B:SF4603
|
2.3
|
61.0
|
1.0
|
S4
|
B:SF4603
|
2.3
|
63.9
|
1.0
|
S1
|
B:SF4603
|
2.3
|
47.1
|
1.0
|
FE4
|
B:SF4603
|
2.7
|
59.6
|
1.0
|
FE3
|
B:SF4603
|
2.7
|
80.5
|
1.0
|
FE1
|
B:SF4603
|
2.7
|
76.1
|
1.0
|
CB
|
B:CYS440
|
3.4
|
36.8
|
1.0
|
S2
|
B:SF4603
|
3.9
|
51.5
|
1.0
|
CB
|
B:CYS479
|
4.1
|
43.6
|
1.0
|
CA
|
B:SER436
|
4.4
|
33.8
|
1.0
|
N
|
B:SER436
|
4.4
|
35.4
|
1.0
|
SG
|
B:CYS479
|
4.5
|
45.3
|
1.0
|
N
|
B:ALA443
|
4.5
|
31.1
|
1.0
|
CDA
|
B:SRM604
|
4.5
|
48.0
|
1.0
|
C3A
|
B:SRM604
|
4.6
|
51.7
|
1.0
|
CA
|
B:ALA443
|
4.6
|
21.5
|
1.0
|
CB
|
B:ALA443
|
4.7
|
38.5
|
1.0
|
SG
|
B:CYS434
|
4.7
|
35.4
|
1.0
|
SG
|
B:CYS483
|
4.8
|
61.1
|
1.0
|
CA
|
B:CYS440
|
4.8
|
35.3
|
1.0
|
C4A
|
B:SRM604
|
4.8
|
51.3
|
1.0
|
C
|
B:LEU442
|
4.8
|
36.5
|
1.0
|
CBA
|
B:SRM604
|
4.8
|
51.1
|
1.0
|
CB
|
B:LEU442
|
4.9
|
29.6
|
1.0
|
C1A
|
B:SRM604
|
5.0
|
44.9
|
1.0
|
CB
|
B:CYS483
|
5.0
|
35.8
|
1.0
|
|
Iron binding site 3 out
of 5 in 9c91
Go back to
Iron Binding Sites List in 9c91
Iron binding site 3 out
of 5 in the Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe603
b:80.5
occ:1.00
|
FE3
|
B:SF4603
|
0.0
|
80.5
|
1.0
|
CB
|
B:CYS479
|
1.6
|
43.6
|
1.0
|
S1
|
B:SF4603
|
2.3
|
47.1
|
1.0
|
S4
|
B:SF4603
|
2.3
|
63.9
|
1.0
|
S2
|
B:SF4603
|
2.3
|
51.5
|
1.0
|
SG
|
B:CYS479
|
2.3
|
45.3
|
1.0
|
FE2
|
B:SF4603
|
2.7
|
47.4
|
1.0
|
FE4
|
B:SF4603
|
2.7
|
59.6
|
1.0
|
FE1
|
B:SF4603
|
2.7
|
76.1
|
1.0
|
CA
|
B:CYS479
|
3.1
|
31.1
|
1.0
|
ND2
|
B:ASN481
|
3.5
|
35.4
|
1.0
|
N
|
B:CYS479
|
3.6
|
44.8
|
1.0
|
C
|
B:CYS479
|
3.9
|
37.3
|
1.0
|
S3
|
B:SF4603
|
3.9
|
61.0
|
1.0
|
CB
|
B:ASN481
|
4.1
|
32.7
|
1.0
|
CG
|
B:ASN481
|
4.2
|
38.0
|
1.0
|
C
|
B:GLY478
|
4.2
|
43.4
|
1.0
|
O
|
B:CYS479
|
4.3
|
49.3
|
1.0
|
O
|
B:LEU442
|
4.4
|
40.3
|
1.0
|
N
|
B:ASN481
|
4.5
|
39.3
|
1.0
|
O
|
B:GLY478
|
4.5
|
58.0
|
1.0
|
SG
|
B:CYS440
|
4.6
|
39.4
|
1.0
|
N
|
B:PRO480
|
4.6
|
40.0
|
1.0
|
C
|
B:LEU442
|
4.7
|
36.5
|
1.0
|
CA
|
B:ALA443
|
4.8
|
21.5
|
1.0
|
SG
|
B:CYS483
|
4.8
|
61.1
|
1.0
|
CA
|
B:ASN481
|
4.9
|
30.9
|
1.0
|
CB
|
B:LEU442
|
4.9
|
29.6
|
1.0
|
SG
|
B:CYS434
|
4.9
|
35.4
|
1.0
|
N
|
B:ALA443
|
5.0
|
31.1
|
1.0
|
|
Iron binding site 4 out
of 5 in 9c91
Go back to
Iron Binding Sites List in 9c91
Iron binding site 4 out
of 5 in the Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe603
b:59.6
occ:1.00
|
FE4
|
B:SF4603
|
0.0
|
59.6
|
1.0
|
SG
|
B:CYS483
|
2.2
|
61.1
|
1.0
|
S1
|
B:SF4603
|
2.3
|
47.1
|
1.0
|
S2
|
B:SF4603
|
2.3
|
51.5
|
1.0
|
S3
|
B:SF4603
|
2.3
|
61.0
|
1.0
|
CB
|
B:CYS483
|
2.6
|
35.8
|
1.0
|
FE1
|
B:SF4603
|
2.7
|
76.1
|
1.0
|
FE2
|
B:SF4603
|
2.7
|
47.4
|
1.0
|
FE3
|
B:SF4603
|
2.7
|
80.5
|
1.0
|
CA
|
B:CYS483
|
3.8
|
36.3
|
1.0
|
N
|
B:CYS483
|
3.9
|
41.0
|
1.0
|
S4
|
B:SF4603
|
3.9
|
63.9
|
1.0
|
NA
|
B:SRM604
|
3.9
|
52.6
|
1.0
|
CB
|
B:ASN481
|
4.1
|
32.7
|
1.0
|
FE
|
B:SRM604
|
4.2
|
78.7
|
1.0
|
CB
|
B:CYS479
|
4.2
|
43.6
|
1.0
|
ND2
|
B:ASN481
|
4.2
|
35.4
|
1.0
|
C4A
|
B:SRM604
|
4.2
|
51.3
|
1.0
|
ND
|
B:SRM604
|
4.2
|
50.1
|
1.0
|
C1A
|
B:SRM604
|
4.3
|
44.9
|
1.0
|
C4D
|
B:SRM604
|
4.4
|
47.4
|
1.0
|
CHA
|
B:SRM604
|
4.5
|
49.3
|
1.0
|
CB
|
B:CYS434
|
4.6
|
27.3
|
1.0
|
CHB
|
B:SRM604
|
4.6
|
48.7
|
1.0
|
SG
|
B:CYS440
|
4.7
|
39.4
|
1.0
|
SG
|
B:CYS434
|
4.7
|
35.4
|
1.0
|
SG
|
B:CYS479
|
4.7
|
45.3
|
1.0
|
CG
|
B:ASN481
|
4.7
|
38.0
|
1.0
|
C3A
|
B:SRM604
|
4.8
|
51.7
|
1.0
|
NB
|
B:SRM604
|
4.9
|
54.4
|
1.0
|
C1D
|
B:SRM604
|
4.9
|
43.8
|
1.0
|
C1B
|
B:SRM604
|
4.9
|
49.0
|
1.0
|
C
|
B:CYS483
|
5.0
|
42.6
|
1.0
|
|
Iron binding site 5 out
of 5 in 9c91
Go back to
Iron Binding Sites List in 9c91
Iron binding site 5 out
of 5 in the Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe604
b:78.7
occ:1.00
|
FE
|
B:SRM604
|
0.0
|
78.7
|
1.0
|
NB
|
B:SRM604
|
2.0
|
54.4
|
1.0
|
ND
|
B:SRM604
|
2.0
|
50.1
|
1.0
|
NA
|
B:SRM604
|
2.0
|
52.6
|
1.0
|
NC
|
B:SRM604
|
2.0
|
57.0
|
1.0
|
SG
|
B:CYS483
|
2.3
|
61.1
|
1.0
|
O1
|
B:PO4601
|
2.9
|
52.5
|
1.0
|
C4B
|
B:SRM604
|
3.0
|
50.2
|
1.0
|
C1B
|
B:SRM604
|
3.0
|
49.0
|
1.0
|
C4A
|
B:SRM604
|
3.0
|
51.3
|
1.0
|
C1D
|
B:SRM604
|
3.0
|
43.8
|
1.0
|
C4D
|
B:SRM604
|
3.0
|
47.4
|
1.0
|
C1A
|
B:SRM604
|
3.0
|
44.9
|
1.0
|
C4C
|
B:SRM604
|
3.0
|
51.6
|
1.0
|
C1C
|
B:SRM604
|
3.0
|
53.2
|
1.0
|
O3
|
B:PO4601
|
3.1
|
52.8
|
1.0
|
CHD
|
B:SRM604
|
3.4
|
41.3
|
1.0
|
CHA
|
B:SRM604
|
3.4
|
49.3
|
1.0
|
CHB
|
B:SRM604
|
3.4
|
48.7
|
1.0
|
CHC
|
B:SRM604
|
3.4
|
48.3
|
1.0
|
P
|
B:PO4601
|
3.5
|
42.1
|
1.0
|
CB
|
B:CYS483
|
3.5
|
35.8
|
1.0
|
O2
|
B:PO4601
|
4.0
|
50.3
|
1.0
|
FE4
|
B:SF4603
|
4.2
|
59.6
|
1.0
|
C3B
|
B:SRM604
|
4.2
|
45.7
|
1.0
|
C2B
|
B:SRM604
|
4.2
|
46.8
|
1.0
|
C3A
|
B:SRM604
|
4.3
|
51.7
|
1.0
|
C2D
|
B:SRM604
|
4.3
|
49.3
|
1.0
|
C2A
|
B:SRM604
|
4.3
|
41.6
|
1.0
|
C3D
|
B:SRM604
|
4.3
|
47.8
|
1.0
|
C3C
|
B:SRM604
|
4.3
|
53.5
|
1.0
|
C2C
|
B:SRM604
|
4.3
|
50.7
|
1.0
|
CA
|
B:CYS483
|
4.3
|
36.3
|
1.0
|
NZ
|
B:LYS215
|
4.8
|
47.2
|
1.0
|
CDB
|
B:SRM604
|
4.8
|
53.6
|
1.0
|
O4
|
B:PO4601
|
4.9
|
60.8
|
1.0
|
CMA
|
B:SRM604
|
4.9
|
50.8
|
1.0
|
CAB
|
B:SRM604
|
4.9
|
48.5
|
1.0
|
|
Reference:
B.Ghazi Esfahani,
N.Walia,
K.Neselu,
M.Aragon,
I.Askenasy,
A.Wei,
J.H.Mendez,
M.E.Stroupe.
Assimilatory Nadph-Dependent Sulfite Reductase Minimal Dimer To Be Published.
Page generated: Tue Feb 25 09:58:26 2025
|