Iron in PDB 9cz9: Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
24;
Binding sites:
The binding sites of Iron atom in the Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis
(pdb code 9cz9). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 24 binding sites of Iron where determined in the
Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis, PDB code: 9cz9:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 24 in 9cz9
Go back to
Iron Binding Sites List in 9cz9
Iron binding site 1 out
of 24 in the Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe201
b:12.8
occ:1.00
|
OE1
|
A:GLU30
|
1.9
|
5.9
|
1.0
|
|
OE2
|
A:GLU148
|
2.0
|
14.1
|
1.0
|
|
OE2
|
A:GLU30
|
2.0
|
7.7
|
1.0
|
|
CD
|
A:GLU30
|
2.3
|
4.1
|
1.0
|
|
O
|
A:HOH330
|
2.4
|
11.6
|
1.0
|
|
ND1
|
A:HIS66
|
2.7
|
6.9
|
1.0
|
|
OD1
|
A:ASP63
|
2.7
|
11.8
|
1.0
|
|
CD
|
A:GLU148
|
2.9
|
11.3
|
1.0
|
|
CG
|
A:ASP63
|
3.1
|
10.2
|
1.0
|
|
OE1
|
A:GLU148
|
3.5
|
10.9
|
1.0
|
|
CE1
|
A:HIS66
|
3.5
|
6.7
|
1.0
|
|
FE
|
A:FE202
|
3.6
|
19.6
|
1.0
|
|
CB
|
A:ASP63
|
3.6
|
6.9
|
1.0
|
|
CG
|
A:HIS66
|
3.7
|
2.9
|
1.0
|
|
CG
|
A:GLU30
|
3.8
|
2.8
|
1.0
|
|
OD2
|
A:ASP63
|
3.9
|
12.4
|
1.0
|
|
CA
|
A:ASP63
|
3.9
|
6.7
|
1.0
|
|
CB
|
A:HIS66
|
4.0
|
2.8
|
1.0
|
|
CG
|
A:GLU148
|
4.0
|
4.8
|
1.0
|
|
CB
|
A:GLU30
|
4.5
|
1.8
|
1.0
|
|
OH
|
A:TYR123
|
4.5
|
2.7
|
1.0
|
|
CE2
|
A:TYR123
|
4.5
|
3.0
|
1.0
|
|
O
|
A:ASP63
|
4.5
|
3.8
|
1.0
|
|
CG2
|
A:ILE144
|
4.6
|
1.6
|
1.0
|
|
NE2
|
A:HIS66
|
4.7
|
7.4
|
1.0
|
|
C
|
A:ASP63
|
4.7
|
4.9
|
1.0
|
|
CB
|
A:ALA119
|
4.8
|
2.7
|
1.0
|
|
CD2
|
A:HIS66
|
4.8
|
3.6
|
1.0
|
|
CA
|
A:GLU30
|
4.8
|
1.5
|
1.0
|
|
N
|
A:ASP63
|
4.9
|
5.2
|
1.0
|
|
OE1
|
A:GLU116
|
4.9
|
14.1
|
1.0
|
|
CZ
|
A:TYR123
|
5.0
|
2.5
|
1.0
|
|
Iron binding site 2 out
of 24 in 9cz9
Go back to
Iron Binding Sites List in 9cz9
Iron binding site 2 out
of 24 in the Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe202
b:19.6
occ:1.00
|
OE2
|
A:GLU116
|
2.2
|
8.8
|
1.0
|
|
OE1
|
A:GLU116
|
2.2
|
14.1
|
1.0
|
|
OD1
|
A:ASP63
|
2.2
|
11.8
|
1.0
|
|
OE1
|
A:GLU148
|
2.3
|
10.9
|
1.0
|
|
OD2
|
A:ASP63
|
2.5
|
12.4
|
1.0
|
|
CD
|
A:GLU116
|
2.5
|
9.1
|
1.0
|
|
ND1
|
A:HIS151
|
2.5
|
12.0
|
1.0
|
|
CG
|
A:ASP63
|
2.7
|
10.2
|
1.0
|
|
CD
|
A:GLU148
|
3.0
|
11.3
|
1.0
|
|
OE2
|
A:GLU148
|
3.1
|
14.1
|
1.0
|
|
CE1
|
A:HIS151
|
3.2
|
11.7
|
1.0
|
|
CG
|
A:HIS151
|
3.6
|
7.8
|
1.0
|
|
FE
|
A:FE201
|
3.6
|
12.8
|
1.0
|
|
O
|
A:HOH330
|
3.7
|
11.6
|
1.0
|
|
CB
|
A:HIS151
|
4.0
|
8.0
|
1.0
|
|
CG
|
A:GLU116
|
4.0
|
5.5
|
1.0
|
|
CB
|
A:ASP63
|
4.2
|
6.9
|
1.0
|
|
NE2
|
A:HIS151
|
4.3
|
13.3
|
1.0
|
|
O
|
A:ALA59
|
4.4
|
12.3
|
1.0
|
|
CG
|
A:GLU148
|
4.5
|
4.8
|
1.0
|
|
CD2
|
A:HIS151
|
4.5
|
6.8
|
1.0
|
|
CE1
|
A:HIS66
|
4.7
|
6.7
|
1.0
|
|
CE2
|
A:TYR37
|
4.8
|
3.9
|
1.0
|
|
OH
|
A:TYR37
|
4.8
|
5.3
|
1.0
|
|
CB
|
A:ALA59
|
4.8
|
8.0
|
1.0
|
|
ND1
|
A:HIS66
|
4.8
|
6.9
|
1.0
|
|
CA
|
A:GLU148
|
4.8
|
4.8
|
1.0
|
|
CB
|
A:GLU116
|
4.9
|
5.1
|
1.0
|
|
CA
|
A:ASP63
|
5.0
|
6.7
|
1.0
|
|
CB
|
A:GLU148
|
5.0
|
4.2
|
1.0
|
|
Iron binding site 3 out
of 24 in 9cz9
Go back to
Iron Binding Sites List in 9cz9
Iron binding site 3 out
of 24 in the Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe201
b:12.8
occ:1.00
|
OE1
|
B:GLU30
|
1.9
|
5.9
|
1.0
|
|
OE2
|
B:GLU148
|
2.0
|
14.1
|
1.0
|
|
OE2
|
B:GLU30
|
2.0
|
7.7
|
1.0
|
|
CD
|
B:GLU30
|
2.3
|
4.1
|
1.0
|
|
O
|
B:HOH330
|
2.4
|
11.6
|
1.0
|
|
ND1
|
B:HIS66
|
2.7
|
6.9
|
1.0
|
|
OD1
|
B:ASP63
|
2.7
|
11.8
|
1.0
|
|
CD
|
B:GLU148
|
2.9
|
11.3
|
1.0
|
|
CG
|
B:ASP63
|
3.1
|
10.2
|
1.0
|
|
OE1
|
B:GLU148
|
3.5
|
10.9
|
1.0
|
|
CE1
|
B:HIS66
|
3.5
|
6.7
|
1.0
|
|
FE
|
B:FE202
|
3.6
|
19.6
|
1.0
|
|
CB
|
B:ASP63
|
3.6
|
6.9
|
1.0
|
|
CG
|
B:HIS66
|
3.7
|
2.9
|
1.0
|
|
CG
|
B:GLU30
|
3.8
|
2.8
|
1.0
|
|
OD2
|
B:ASP63
|
3.9
|
12.4
|
1.0
|
|
CA
|
B:ASP63
|
3.9
|
6.7
|
1.0
|
|
CB
|
B:HIS66
|
4.0
|
2.8
|
1.0
|
|
CG
|
B:GLU148
|
4.0
|
4.8
|
1.0
|
|
CB
|
B:GLU30
|
4.5
|
1.8
|
1.0
|
|
OH
|
B:TYR123
|
4.5
|
2.7
|
1.0
|
|
CE2
|
B:TYR123
|
4.5
|
3.0
|
1.0
|
|
O
|
B:ASP63
|
4.5
|
3.8
|
1.0
|
|
CG2
|
B:ILE144
|
4.6
|
1.6
|
1.0
|
|
NE2
|
B:HIS66
|
4.7
|
7.4
|
1.0
|
|
C
|
B:ASP63
|
4.7
|
4.9
|
1.0
|
|
CB
|
B:ALA119
|
4.8
|
2.7
|
1.0
|
|
CD2
|
B:HIS66
|
4.8
|
3.6
|
1.0
|
|
CA
|
B:GLU30
|
4.8
|
1.5
|
1.0
|
|
N
|
B:ASP63
|
4.9
|
5.2
|
1.0
|
|
OE1
|
B:GLU116
|
4.9
|
14.1
|
1.0
|
|
CZ
|
B:TYR123
|
5.0
|
2.5
|
1.0
|
|
Iron binding site 4 out
of 24 in 9cz9
Go back to
Iron Binding Sites List in 9cz9
Iron binding site 4 out
of 24 in the Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe202
b:19.6
occ:1.00
|
OE2
|
B:GLU116
|
2.2
|
8.8
|
1.0
|
|
OE1
|
B:GLU116
|
2.2
|
14.1
|
1.0
|
|
OD1
|
B:ASP63
|
2.2
|
11.8
|
1.0
|
|
OE1
|
B:GLU148
|
2.3
|
10.9
|
1.0
|
|
OD2
|
B:ASP63
|
2.5
|
12.4
|
1.0
|
|
CD
|
B:GLU116
|
2.5
|
9.1
|
1.0
|
|
ND1
|
B:HIS151
|
2.5
|
12.0
|
1.0
|
|
CG
|
B:ASP63
|
2.7
|
10.2
|
1.0
|
|
CD
|
B:GLU148
|
3.0
|
11.3
|
1.0
|
|
OE2
|
B:GLU148
|
3.1
|
14.1
|
1.0
|
|
CE1
|
B:HIS151
|
3.2
|
11.7
|
1.0
|
|
CG
|
B:HIS151
|
3.6
|
7.8
|
1.0
|
|
FE
|
B:FE201
|
3.6
|
12.8
|
1.0
|
|
O
|
B:HOH330
|
3.7
|
11.6
|
1.0
|
|
CB
|
B:HIS151
|
4.0
|
8.0
|
1.0
|
|
CG
|
B:GLU116
|
4.0
|
5.5
|
1.0
|
|
CB
|
B:ASP63
|
4.2
|
6.9
|
1.0
|
|
NE2
|
B:HIS151
|
4.3
|
13.3
|
1.0
|
|
O
|
B:ALA59
|
4.4
|
12.3
|
1.0
|
|
CG
|
B:GLU148
|
4.5
|
4.8
|
1.0
|
|
CD2
|
B:HIS151
|
4.5
|
6.8
|
1.0
|
|
CE1
|
B:HIS66
|
4.7
|
6.7
|
1.0
|
|
CE2
|
B:TYR37
|
4.8
|
3.9
|
1.0
|
|
OH
|
B:TYR37
|
4.8
|
5.3
|
1.0
|
|
CB
|
B:ALA59
|
4.8
|
8.0
|
1.0
|
|
ND1
|
B:HIS66
|
4.8
|
6.9
|
1.0
|
|
CA
|
B:GLU148
|
4.8
|
4.8
|
1.0
|
|
CB
|
B:GLU116
|
4.9
|
5.1
|
1.0
|
|
CA
|
B:ASP63
|
5.0
|
6.7
|
1.0
|
|
CB
|
B:GLU148
|
5.0
|
4.2
|
1.0
|
|
Iron binding site 5 out
of 24 in 9cz9
Go back to
Iron Binding Sites List in 9cz9
Iron binding site 5 out
of 24 in the Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe201
b:12.8
occ:1.00
|
OE1
|
C:GLU30
|
1.9
|
5.9
|
1.0
|
|
OE2
|
C:GLU148
|
2.0
|
14.1
|
1.0
|
|
OE2
|
C:GLU30
|
2.0
|
7.7
|
1.0
|
|
CD
|
C:GLU30
|
2.3
|
4.1
|
1.0
|
|
O
|
C:HOH330
|
2.4
|
11.6
|
1.0
|
|
ND1
|
C:HIS66
|
2.7
|
6.9
|
1.0
|
|
OD1
|
C:ASP63
|
2.7
|
11.8
|
1.0
|
|
CD
|
C:GLU148
|
2.9
|
11.3
|
1.0
|
|
CG
|
C:ASP63
|
3.1
|
10.2
|
1.0
|
|
OE1
|
C:GLU148
|
3.5
|
10.9
|
1.0
|
|
CE1
|
C:HIS66
|
3.5
|
6.7
|
1.0
|
|
FE
|
C:FE202
|
3.6
|
19.6
|
1.0
|
|
CB
|
C:ASP63
|
3.6
|
6.9
|
1.0
|
|
CG
|
C:HIS66
|
3.7
|
2.9
|
1.0
|
|
CG
|
C:GLU30
|
3.8
|
2.8
|
1.0
|
|
OD2
|
C:ASP63
|
3.9
|
12.4
|
1.0
|
|
CA
|
C:ASP63
|
3.9
|
6.7
|
1.0
|
|
CB
|
C:HIS66
|
4.0
|
2.8
|
1.0
|
|
CG
|
C:GLU148
|
4.0
|
4.8
|
1.0
|
|
CB
|
C:GLU30
|
4.5
|
1.8
|
1.0
|
|
OH
|
C:TYR123
|
4.5
|
2.7
|
1.0
|
|
CE2
|
C:TYR123
|
4.5
|
3.0
|
1.0
|
|
O
|
C:ASP63
|
4.5
|
3.8
|
1.0
|
|
CG2
|
C:ILE144
|
4.6
|
1.6
|
1.0
|
|
NE2
|
C:HIS66
|
4.7
|
7.4
|
1.0
|
|
C
|
C:ASP63
|
4.7
|
4.9
|
1.0
|
|
CB
|
C:ALA119
|
4.8
|
2.7
|
1.0
|
|
CD2
|
C:HIS66
|
4.8
|
3.6
|
1.0
|
|
CA
|
C:GLU30
|
4.8
|
1.5
|
1.0
|
|
N
|
C:ASP63
|
4.9
|
5.2
|
1.0
|
|
OE1
|
C:GLU116
|
4.9
|
14.1
|
1.0
|
|
CZ
|
C:TYR123
|
5.0
|
2.5
|
1.0
|
|
Iron binding site 6 out
of 24 in 9cz9
Go back to
Iron Binding Sites List in 9cz9
Iron binding site 6 out
of 24 in the Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe202
b:19.6
occ:1.00
|
OE2
|
C:GLU116
|
2.2
|
8.8
|
1.0
|
|
OE1
|
C:GLU116
|
2.2
|
14.1
|
1.0
|
|
OD1
|
C:ASP63
|
2.2
|
11.8
|
1.0
|
|
OE1
|
C:GLU148
|
2.3
|
10.9
|
1.0
|
|
OD2
|
C:ASP63
|
2.5
|
12.4
|
1.0
|
|
CD
|
C:GLU116
|
2.5
|
9.1
|
1.0
|
|
ND1
|
C:HIS151
|
2.5
|
12.0
|
1.0
|
|
CG
|
C:ASP63
|
2.7
|
10.2
|
1.0
|
|
CD
|
C:GLU148
|
3.0
|
11.3
|
1.0
|
|
OE2
|
C:GLU148
|
3.1
|
14.1
|
1.0
|
|
CE1
|
C:HIS151
|
3.2
|
11.7
|
1.0
|
|
CG
|
C:HIS151
|
3.6
|
7.8
|
1.0
|
|
FE
|
C:FE201
|
3.6
|
12.8
|
1.0
|
|
O
|
C:HOH330
|
3.7
|
11.6
|
1.0
|
|
CB
|
C:HIS151
|
4.0
|
8.0
|
1.0
|
|
CG
|
C:GLU116
|
4.0
|
5.5
|
1.0
|
|
CB
|
C:ASP63
|
4.2
|
6.9
|
1.0
|
|
NE2
|
C:HIS151
|
4.3
|
13.3
|
1.0
|
|
O
|
C:ALA59
|
4.4
|
12.3
|
1.0
|
|
CG
|
C:GLU148
|
4.5
|
4.8
|
1.0
|
|
CD2
|
C:HIS151
|
4.5
|
6.8
|
1.0
|
|
CE1
|
C:HIS66
|
4.7
|
6.7
|
1.0
|
|
CE2
|
C:TYR37
|
4.8
|
3.9
|
1.0
|
|
OH
|
C:TYR37
|
4.8
|
5.3
|
1.0
|
|
CB
|
C:ALA59
|
4.8
|
8.0
|
1.0
|
|
ND1
|
C:HIS66
|
4.8
|
6.9
|
1.0
|
|
CA
|
C:GLU148
|
4.8
|
4.8
|
1.0
|
|
CB
|
C:GLU116
|
4.9
|
5.1
|
1.0
|
|
CA
|
C:ASP63
|
5.0
|
6.7
|
1.0
|
|
CB
|
C:GLU148
|
5.0
|
4.2
|
1.0
|
|
Iron binding site 7 out
of 24 in 9cz9
Go back to
Iron Binding Sites List in 9cz9
Iron binding site 7 out
of 24 in the Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe201
b:12.8
occ:1.00
|
OE1
|
D:GLU30
|
1.9
|
5.9
|
1.0
|
|
OE2
|
D:GLU148
|
2.0
|
14.1
|
1.0
|
|
OE2
|
D:GLU30
|
2.0
|
7.7
|
1.0
|
|
CD
|
D:GLU30
|
2.3
|
4.1
|
1.0
|
|
O
|
D:HOH330
|
2.4
|
11.6
|
1.0
|
|
ND1
|
D:HIS66
|
2.7
|
6.9
|
1.0
|
|
OD1
|
D:ASP63
|
2.7
|
11.8
|
1.0
|
|
CD
|
D:GLU148
|
2.9
|
11.3
|
1.0
|
|
CG
|
D:ASP63
|
3.1
|
10.2
|
1.0
|
|
OE1
|
D:GLU148
|
3.5
|
10.9
|
1.0
|
|
CE1
|
D:HIS66
|
3.5
|
6.7
|
1.0
|
|
FE
|
D:FE202
|
3.6
|
19.6
|
1.0
|
|
CB
|
D:ASP63
|
3.6
|
6.9
|
1.0
|
|
CG
|
D:HIS66
|
3.7
|
2.9
|
1.0
|
|
CG
|
D:GLU30
|
3.8
|
2.8
|
1.0
|
|
OD2
|
D:ASP63
|
3.9
|
12.4
|
1.0
|
|
CA
|
D:ASP63
|
3.9
|
6.7
|
1.0
|
|
CB
|
D:HIS66
|
4.0
|
2.8
|
1.0
|
|
CG
|
D:GLU148
|
4.0
|
4.8
|
1.0
|
|
CB
|
D:GLU30
|
4.5
|
1.8
|
1.0
|
|
OH
|
D:TYR123
|
4.5
|
2.7
|
1.0
|
|
CE2
|
D:TYR123
|
4.5
|
3.0
|
1.0
|
|
O
|
D:ASP63
|
4.5
|
3.8
|
1.0
|
|
CG2
|
D:ILE144
|
4.7
|
1.6
|
1.0
|
|
NE2
|
D:HIS66
|
4.7
|
7.4
|
1.0
|
|
C
|
D:ASP63
|
4.7
|
4.9
|
1.0
|
|
CB
|
D:ALA119
|
4.8
|
2.7
|
1.0
|
|
CD2
|
D:HIS66
|
4.8
|
3.6
|
1.0
|
|
CA
|
D:GLU30
|
4.8
|
1.5
|
1.0
|
|
N
|
D:ASP63
|
4.9
|
5.2
|
1.0
|
|
OE1
|
D:GLU116
|
4.9
|
14.1
|
1.0
|
|
CZ
|
D:TYR123
|
5.0
|
2.5
|
1.0
|
|
Iron binding site 8 out
of 24 in 9cz9
Go back to
Iron Binding Sites List in 9cz9
Iron binding site 8 out
of 24 in the Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe202
b:19.6
occ:1.00
|
OE2
|
D:GLU116
|
2.2
|
8.8
|
1.0
|
|
OE1
|
D:GLU116
|
2.2
|
14.1
|
1.0
|
|
OD1
|
D:ASP63
|
2.2
|
11.8
|
1.0
|
|
OE1
|
D:GLU148
|
2.3
|
10.9
|
1.0
|
|
OD2
|
D:ASP63
|
2.5
|
12.4
|
1.0
|
|
CD
|
D:GLU116
|
2.5
|
9.1
|
1.0
|
|
ND1
|
D:HIS151
|
2.5
|
12.0
|
1.0
|
|
CG
|
D:ASP63
|
2.7
|
10.2
|
1.0
|
|
CD
|
D:GLU148
|
3.0
|
11.3
|
1.0
|
|
OE2
|
D:GLU148
|
3.1
|
14.1
|
1.0
|
|
CE1
|
D:HIS151
|
3.2
|
11.7
|
1.0
|
|
CG
|
D:HIS151
|
3.6
|
7.8
|
1.0
|
|
FE
|
D:FE201
|
3.6
|
12.8
|
1.0
|
|
O
|
D:HOH330
|
3.7
|
11.6
|
1.0
|
|
CB
|
D:HIS151
|
4.0
|
8.0
|
1.0
|
|
CG
|
D:GLU116
|
4.0
|
5.5
|
1.0
|
|
CB
|
D:ASP63
|
4.2
|
6.9
|
1.0
|
|
NE2
|
D:HIS151
|
4.3
|
13.3
|
1.0
|
|
O
|
D:ALA59
|
4.4
|
12.3
|
1.0
|
|
CG
|
D:GLU148
|
4.5
|
4.8
|
1.0
|
|
CD2
|
D:HIS151
|
4.5
|
6.8
|
1.0
|
|
CE1
|
D:HIS66
|
4.7
|
6.7
|
1.0
|
|
CE2
|
D:TYR37
|
4.8
|
3.9
|
1.0
|
|
OH
|
D:TYR37
|
4.8
|
5.3
|
1.0
|
|
CB
|
D:ALA59
|
4.8
|
8.0
|
1.0
|
|
ND1
|
D:HIS66
|
4.8
|
6.9
|
1.0
|
|
CA
|
D:GLU148
|
4.8
|
4.8
|
1.0
|
|
CB
|
D:GLU116
|
4.9
|
5.1
|
1.0
|
|
CA
|
D:ASP63
|
5.0
|
6.7
|
1.0
|
|
CB
|
D:GLU148
|
5.0
|
4.2
|
1.0
|
|
Iron binding site 9 out
of 24 in 9cz9
Go back to
Iron Binding Sites List in 9cz9
Iron binding site 9 out
of 24 in the Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe201
b:12.8
occ:1.00
|
OE1
|
E:GLU30
|
1.9
|
5.9
|
1.0
|
|
OE2
|
E:GLU148
|
2.0
|
14.1
|
1.0
|
|
OE2
|
E:GLU30
|
2.0
|
7.7
|
1.0
|
|
CD
|
E:GLU30
|
2.3
|
4.1
|
1.0
|
|
O
|
E:HOH330
|
2.4
|
11.6
|
1.0
|
|
ND1
|
E:HIS66
|
2.7
|
6.9
|
1.0
|
|
OD1
|
E:ASP63
|
2.7
|
11.8
|
1.0
|
|
CD
|
E:GLU148
|
2.9
|
11.3
|
1.0
|
|
CG
|
E:ASP63
|
3.1
|
10.2
|
1.0
|
|
OE1
|
E:GLU148
|
3.5
|
10.9
|
1.0
|
|
CE1
|
E:HIS66
|
3.5
|
6.7
|
1.0
|
|
FE
|
E:FE202
|
3.6
|
19.6
|
1.0
|
|
CB
|
E:ASP63
|
3.6
|
6.9
|
1.0
|
|
CG
|
E:HIS66
|
3.7
|
2.9
|
1.0
|
|
CG
|
E:GLU30
|
3.8
|
2.8
|
1.0
|
|
OD2
|
E:ASP63
|
3.9
|
12.4
|
1.0
|
|
CA
|
E:ASP63
|
3.9
|
6.7
|
1.0
|
|
CB
|
E:HIS66
|
4.0
|
2.8
|
1.0
|
|
CG
|
E:GLU148
|
4.0
|
4.8
|
1.0
|
|
CB
|
E:GLU30
|
4.5
|
1.8
|
1.0
|
|
OH
|
E:TYR123
|
4.5
|
2.7
|
1.0
|
|
CE2
|
E:TYR123
|
4.5
|
3.0
|
1.0
|
|
O
|
E:ASP63
|
4.5
|
3.8
|
1.0
|
|
CG2
|
E:ILE144
|
4.6
|
1.6
|
1.0
|
|
NE2
|
E:HIS66
|
4.7
|
7.4
|
1.0
|
|
C
|
E:ASP63
|
4.7
|
4.9
|
1.0
|
|
CB
|
E:ALA119
|
4.8
|
2.7
|
1.0
|
|
CD2
|
E:HIS66
|
4.8
|
3.6
|
1.0
|
|
CA
|
E:GLU30
|
4.8
|
1.5
|
1.0
|
|
N
|
E:ASP63
|
4.9
|
5.2
|
1.0
|
|
OE1
|
E:GLU116
|
4.9
|
14.1
|
1.0
|
|
CZ
|
E:TYR123
|
5.0
|
2.5
|
1.0
|
|
Iron binding site 10 out
of 24 in 9cz9
Go back to
Iron Binding Sites List in 9cz9
Iron binding site 10 out
of 24 in the Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Structure of Thioferritin with Averaged Iron Mineral Core, From Pyrococcus Furiosis within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe202
b:19.6
occ:1.00
|
OE2
|
E:GLU116
|
2.2
|
8.8
|
1.0
|
|
OE1
|
E:GLU116
|
2.2
|
14.1
|
1.0
|
|
OD1
|
E:ASP63
|
2.2
|
11.8
|
1.0
|
|
OE1
|
E:GLU148
|
2.3
|
10.9
|
1.0
|
|
OD2
|
E:ASP63
|
2.5
|
12.4
|
1.0
|
|
CD
|
E:GLU116
|
2.5
|
9.1
|
1.0
|
|
ND1
|
E:HIS151
|
2.5
|
12.0
|
1.0
|
|
CG
|
E:ASP63
|
2.7
|
10.2
|
1.0
|
|
CD
|
E:GLU148
|
3.0
|
11.3
|
1.0
|
|
OE2
|
E:GLU148
|
3.1
|
14.1
|
1.0
|
|
CE1
|
E:HIS151
|
3.2
|
11.7
|
1.0
|
|
CG
|
E:HIS151
|
3.6
|
7.8
|
1.0
|
|
FE
|
E:FE201
|
3.6
|
12.8
|
1.0
|
|
O
|
E:HOH330
|
3.7
|
11.6
|
1.0
|
|
CB
|
E:HIS151
|
4.0
|
8.0
|
1.0
|
|
CG
|
E:GLU116
|
4.0
|
5.5
|
1.0
|
|
CB
|
E:ASP63
|
4.2
|
6.9
|
1.0
|
|
NE2
|
E:HIS151
|
4.3
|
13.3
|
1.0
|
|
O
|
E:ALA59
|
4.4
|
12.3
|
1.0
|
|
CG
|
E:GLU148
|
4.5
|
4.8
|
1.0
|
|
CD2
|
E:HIS151
|
4.5
|
6.8
|
1.0
|
|
CE1
|
E:HIS66
|
4.7
|
6.7
|
1.0
|
|
CE2
|
E:TYR37
|
4.8
|
3.9
|
1.0
|
|
OH
|
E:TYR37
|
4.8
|
5.3
|
1.0
|
|
CB
|
E:ALA59
|
4.8
|
8.0
|
1.0
|
|
ND1
|
E:HIS66
|
4.8
|
6.9
|
1.0
|
|
CA
|
E:GLU148
|
4.8
|
4.8
|
1.0
|
|
CB
|
E:GLU116
|
4.9
|
5.1
|
1.0
|
|
CA
|
E:ASP63
|
5.0
|
6.7
|
1.0
|
|
CB
|
E:GLU148
|
5.0
|
4.2
|
1.0
|
|
Reference:
C.C.Gauvin,
H.K.Waghwani,
M.Tokmina-Lukaszewska,
B.Bothner,
T.Douglas,
C.M.Lawrence.
Structure of Thioferritin From Pyrococcus Furiosis. To Be Published.
Page generated: Sat Aug 23 03:03:03 2025
|
