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Iron in PDB 9h78: [Fes] Cluster-Loaded Sms Complex From M. Jannaschii

Iron Binding Sites:

The binding sites of Iron atom in the [Fes] Cluster-Loaded Sms Complex From M. Jannaschii (pdb code 9h78). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the [Fes] Cluster-Loaded Sms Complex From M. Jannaschii, PDB code: 9h78:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in 9h78

Go back to Iron Binding Sites List in 9h78
Iron binding site 1 out of 4 in the [Fes] Cluster-Loaded Sms Complex From M. Jannaschii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of [Fes] Cluster-Loaded Sms Complex From M. Jannaschii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe301

b:32.0
occ:1.00
FE1 A:SF4301 0.0 32.0 1.0
S3 A:SF4301 2.3 21.7 1.0
S4 A:SF4301 2.3 41.4 1.0
S2 A:SF4301 2.3 20.3 1.0
SG A:CYS239 2.4 41.5 1.0
FE2 A:SF4301 2.7 42.6 1.0
FE4 A:SF4301 2.7 31.5 1.0
FE3 A:SF4301 2.7 40.9 1.0
CB A:CYS239 3.7 34.9 1.0
S1 A:SF4301 3.8 33.2 1.0
CA A:CYS239 4.0 18.1 1.0
N A:CYS239 4.4 23.0 1.0
CE2 A:PHE234 4.7 31.0 1.0
C A:GLU238 4.9 33.2 1.0
SG A:CYS218 4.9 35.6 1.0

Iron binding site 2 out of 4 in 9h78

Go back to Iron Binding Sites List in 9h78
Iron binding site 2 out of 4 in the [Fes] Cluster-Loaded Sms Complex From M. Jannaschii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of [Fes] Cluster-Loaded Sms Complex From M. Jannaschii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe301

b:42.6
occ:1.00
FE2 A:SF4301 0.0 42.6 1.0
S4 A:SF4301 2.3 41.4 1.0
S3 A:SF4301 2.3 21.7 1.0
S1 A:SF4301 2.3 33.2 1.0
FE3 A:SF4301 2.7 40.9 1.0
FE1 A:SF4301 2.7 32.0 1.0
FE4 A:SF4301 2.7 31.5 1.0
S2 A:SF4301 3.8 20.3 1.0
SG A:CYS218 4.9 35.6 1.0
SG A:CYS239 5.0 41.5 1.0
CB A:PRO247 5.0 25.8 1.0
CZ A:PHE234 5.0 32.0 1.0

Iron binding site 3 out of 4 in 9h78

Go back to Iron Binding Sites List in 9h78
Iron binding site 3 out of 4 in the [Fes] Cluster-Loaded Sms Complex From M. Jannaschii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of [Fes] Cluster-Loaded Sms Complex From M. Jannaschii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe301

b:40.9
occ:1.00
FE3 A:SF4301 0.0 40.9 1.0
S1 A:SF4301 2.2 33.2 1.0
S2 A:SF4301 2.3 20.3 1.0
S4 A:SF4301 2.3 41.4 1.0
SG A:CYS242 2.6 35.2 1.0
FE4 A:SF4301 2.7 31.5 1.0
FE2 A:SF4301 2.7 42.6 1.0
FE1 A:SF4301 2.7 32.0 1.0
CB A:CYS242 3.6 23.8 1.0
S3 A:SF4301 3.8 21.7 1.0
CA A:LYS245 4.4 22.1 1.0
N A:LYS245 4.6 19.7 1.0
SG A:CYS239 4.7 41.5 1.0
N A:VAL246 4.9 25.6 1.0
CA A:CYS239 4.9 18.1 1.0
C A:LYS245 4.9 31.6 1.0
SG A:CYS218 4.9 35.6 1.0
CD A:LYS245 5.0 30.1 1.0

Iron binding site 4 out of 4 in 9h78

Go back to Iron Binding Sites List in 9h78
Iron binding site 4 out of 4 in the [Fes] Cluster-Loaded Sms Complex From M. Jannaschii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of [Fes] Cluster-Loaded Sms Complex From M. Jannaschii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe301

b:31.5
occ:1.00
FE4 A:SF4301 0.0 31.5 1.0
S2 A:SF4301 2.3 20.3 1.0
S3 A:SF4301 2.3 21.7 1.0
S1 A:SF4301 2.3 33.2 1.0
SG A:CYS218 2.4 35.6 1.0
FE3 A:SF4301 2.7 40.9 1.0
FE1 A:SF4301 2.7 32.0 1.0
FE2 A:SF4301 2.7 42.6 1.0
CB A:CYS218 3.5 26.7 1.0
S4 A:SF4301 3.9 41.4 1.0
C A:LYS245 4.5 31.6 1.0
N A:VAL246 4.6 25.6 1.0
CA A:LYS245 4.6 22.1 1.0
CD A:PRO247 4.8 31.6 1.0
O A:LYS245 4.8 41.4 1.0
SG A:CYS239 4.8 41.5 1.0
CA A:CYS218 4.9 19.1 1.0
CG A:PRO40 4.9 41.1 1.0

Reference:

M.Dussouchaud, M.Martinez-Carranza, P.S.Garcia, M.Clemancey, G.Blondin, J.M.Betton, A.Haouz, S.Ollagnier De Choudens, L.Sauguet, A.Mechaly, F.Barras. The Ancestral Iron-Sulfur Biogenesis Sms System of Methanocaldococcus Jannaschii: A Link Between Geochemistry and Microbiology To Be Published.
Page generated: Fri Aug 8 06:41:24 2025

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