Atomistry » Iron » PDB 9gz0-9imn » 9h8t
Atomistry »
  Iron »
    PDB 9gz0-9imn »
      9h8t »

Iron in PDB 9h8t: Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome

Enzymatic activity of Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome

All present enzymatic activity of Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome:
7.1.1.8;

Other elements in 9h8t:

The structure of Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome also contains other interesting chemical elements:

Zinc (Zn) 2 atoms
Chlorine (Cl) 4 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome (pdb code 9h8t). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 10 binding sites of Iron where determined in the Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome, PDB code: 9h8t:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 10 in 9h8t

Go back to Iron Binding Sites List in 9h8t
Iron binding site 1 out of 10 in the Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe401

b:39.4
occ:1.00
FE D:HEC401 0.0 39.4 1.0
NE2 D:HIS125 2.0 18.1 1.0
NA D:HEC401 2.1 21.5 1.0
NC D:HEC401 2.1 23.0 1.0
NB D:HEC401 2.1 23.6 1.0
ND D:HEC401 2.1 23.8 1.0
CE1 D:HIS125 2.8 18.0 1.0
SD D:MET244 2.8 25.7 1.0
HE1 D:HIS125 2.9 18.3 1.0
C1A D:HEC401 3.1 21.0 1.0
C4D D:HEC401 3.1 21.1 1.0
C4B D:HEC401 3.1 22.1 1.0
C1C D:HEC401 3.1 21.6 1.0
C4C D:HEC401 3.1 18.8 1.0
C4A D:HEC401 3.1 21.2 1.0
C1D D:HEC401 3.1 21.8 1.0
C1B D:HEC401 3.1 22.1 1.0
CD2 D:HIS125 3.1 19.9 1.0
CHA D:HEC401 3.4 20.8 1.0
HD2 D:HIS125 3.4 21.7 1.0
CHD D:HEC401 3.4 20.0 1.0
CHC D:HEC401 3.4 21.2 1.0
CHB D:HEC401 3.5 19.3 1.0
ND1 D:HIS125 4.0 19.1 1.0
HB2 D:MET244 4.0 28.4 1.0
HG3 D:MET244 4.0 28.2 1.0
HE1 D:MET244 4.0 26.6 1.0
CG D:MET244 4.1 28.2 1.0
CE D:MET244 4.1 26.5 1.0
HB3 D:PRO194 4.1 23.1 1.0
CG D:HIS125 4.2 20.3 1.0
C2A D:HEC401 4.3 21.1 1.0
C3A D:HEC401 4.3 21.3 1.0
C2C D:HEC401 4.3 23.5 1.0
C3B D:HEC401 4.3 24.8 1.0
C2B D:HEC401 4.3 25.7 1.0
C3C D:HEC401 4.3 23.6 1.0
HE2 D:MET244 4.3 27.8 1.0
C3D D:HEC401 4.3 24.1 1.0
C2D D:HEC401 4.3 22.4 1.0
HHA D:HEC401 4.4 23.1 1.0
HHD D:HEC401 4.4 22.9 1.0
HHC D:HEC401 4.4 23.7 1.0
HHB D:HEC401 4.4 20.9 1.0
HB2 D:CYS124 4.5 26.7 1.0
CB D:MET244 4.6 26.8 1.0
HD2 D:PRO195 4.7 21.3 1.0
HD1 D:HIS125 4.7 19.6 1.0
HD21 D:LEU197 4.8 18.0 1.0
HG2 D:MET244 4.9 28.8 1.0
HE3 D:MET244 4.9 27.9 1.0
HB3 D:MET244 4.9 29.4 1.0

Iron binding site 2 out of 10 in 9h8t

Go back to Iron Binding Sites List in 9h8t
Iron binding site 2 out of 10 in the Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe300

b:39.1
occ:1.00
FE1 A:FES300 0.0 39.1 1.0
S1 A:FES300 2.2 13.6 1.0
S2 A:FES300 2.2 12.5 1.0
SG A:CYS236 2.3 19.1 1.0
SG A:CYS217 2.3 21.6 1.0
FE2 A:FES300 2.7 37.9 1.0
HG A:CYS217 3.1 17.9 1.0
HB3 A:HIS219 3.1 15.0 1.0
HG A:CYS236 3.2 15.8 1.0
HB3 A:CYS217 3.3 16.7 1.0
CB A:CYS217 3.3 15.7 1.0
HG A:SER241 3.4 22.4 1.0
HB3 A:CYS236 3.4 20.5 1.0
HB2 A:CYS222 3.5 14.8 1.0
HB2 A:CYS217 3.5 16.2 1.0
CB A:CYS236 3.5 21.1 1.0
HB2 A:CYS238 3.6 15.3 1.0
HB2 A:CYS236 3.8 19.0 1.0
H A:LEU220 3.9 14.1 1.0
H A:HIS239 3.9 15.9 1.0
H A:CYS222 3.9 12.7 1.0
CB A:HIS219 4.0 13.3 1.0
OG A:SER241 4.2 22.8 1.0
H A:HIS219 4.2 18.1 1.0
HB2 A:HIS219 4.2 13.7 1.0
ND1 A:HIS219 4.4 16.4 1.0
CB A:CYS222 4.4 15.7 1.0
HB2 A:SER241 4.4 22.0 1.0
ND1 A:HIS239 4.4 15.8 1.0
H A:GLY221 4.5 14.7 1.0
H A:CYS238 4.5 16.2 1.0
CB A:CYS238 4.5 12.6 1.0
H A:SER241 4.6 22.3 1.0
N A:HIS239 4.6 17.6 1.0
N A:CYS222 4.7 11.9 1.0
HB2 A:HIS239 4.7 14.3 1.0
N A:LEU220 4.7 13.0 1.0
CG A:HIS219 4.7 14.9 1.0
HB3 A:CYS238 4.8 12.6 1.0
CA A:CYS217 4.8 15.8 1.0
H A:GLY240 4.8 18.5 1.0
CB A:SER241 4.8 21.9 1.0
CA A:CYS236 4.9 19.0 1.0
N A:HIS219 4.9 18.1 1.0
HB3 A:CYS222 5.0 14.8 1.0

Iron binding site 3 out of 10 in 9h8t

Go back to Iron Binding Sites List in 9h8t
Iron binding site 3 out of 10 in the Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe300

b:37.9
occ:1.00
FE2 A:FES300 0.0 37.9 1.0
ND1 A:HIS239 2.1 15.8 1.0
ND1 A:HIS219 2.2 16.4 1.0
S1 A:FES300 2.2 13.6 1.0
S2 A:FES300 2.2 12.5 1.0
FE1 A:FES300 2.7 39.1 1.0
HB3 A:HIS219 2.8 15.0 1.0
HB2 A:HIS239 2.8 14.3 1.0
CG A:HIS239 3.1 12.6 1.0
CE1 A:HIS239 3.1 10.9 1.0
CG A:HIS219 3.1 14.9 1.0
CE1 A:HIS219 3.1 9.8 1.0
HE1 A:HIS239 3.3 11.9 1.0
HE1 A:HIS219 3.3 10.1 1.0
CB A:HIS219 3.4 13.3 1.0
CB A:HIS239 3.4 13.9 1.0
HB2 A:LEU220 3.5 11.8 1.0
H A:HIS239 3.5 15.9 1.0
H A:LEU220 3.6 14.1 1.0
HB2 A:CYS238 3.8 15.3 1.0
HB2 A:HIS219 3.9 13.7 1.0
N A:HIS239 3.9 17.6 1.0
N A:LEU220 4.1 13.0 1.0
HG2 A:PRO253 4.1 16.5 1.0
HB3 A:CYS238 4.1 12.6 1.0
HG A:SER241 4.1 22.4 1.0
HB3 A:HIS239 4.2 13.2 1.0
CA A:HIS239 4.2 14.9 1.0
NE2 A:HIS239 4.2 10.2 1.0
CD2 A:HIS239 4.2 9.9 1.0
NE2 A:HIS219 4.2 10.3 1.0
CD2 A:HIS219 4.3 13.2 1.0
HG A:LEU220 4.3 12.1 1.0
CB A:LEU220 4.4 10.7 1.0
CB A:CYS238 4.4 12.6 1.0
SG A:CYS217 4.4 21.6 1.0
CA A:HIS219 4.6 13.7 1.0
HD11 A:LEU220 4.6 9.5 1.0
SG A:CYS236 4.6 19.1 1.0
C A:HIS219 4.7 15.0 1.0
C A:CYS238 4.7 15.1 1.0
HD12 A:LEU220 4.7 8.9 1.0
CG A:LEU220 4.7 11.2 1.0
OG A:SER241 4.7 22.8 1.0
CA A:LEU220 4.8 10.4 1.0
HG3 A:PRO253 4.8 16.4 1.0
C A:HIS239 4.9 18.1 1.0
CG A:PRO253 4.9 15.9 1.0
CD1 A:LEU220 4.9 8.3 1.0
H A:HIS219 4.9 18.1 1.0
HE2 A:HIS239 5.0 11.1 1.0
H A:GLY240 5.0 18.5 1.0
HB2 A:CYS222 5.0 14.8 1.0

Iron binding site 4 out of 10 in 9h8t

Go back to Iron Binding Sites List in 9h8t
Iron binding site 4 out of 10 in the Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Fe405

b:19.0
occ:1.00
FE J:HEM405 0.0 19.0 1.0
NB J:HEM405 2.0 19.0 1.0
ND J:HEM405 2.0 19.0 1.0
NA J:HEM405 2.1 19.0 1.0
NC J:HEM405 2.1 19.0 1.0
NE2 J:HIS83 2.2 9.9 1.0
NE2 J:HIS182 2.5 13.6 1.0
CE1 J:HIS83 2.9 8.5 1.0
HE1 J:HIS83 2.9 10.4 1.0
C4B J:HEM405 3.1 19.0 1.0
C1A J:HEM405 3.1 19.0 1.0
C4D J:HEM405 3.1 19.0 1.0
C1C J:HEM405 3.1 19.0 1.0
C4A J:HEM405 3.1 19.0 1.0
C1B J:HEM405 3.1 19.0 1.0
C1D J:HEM405 3.1 19.0 1.0
C4C J:HEM405 3.1 19.0 1.0
HE1 J:HIS182 3.3 13.8 1.0
CE1 J:HIS182 3.3 11.6 1.0
CD2 J:HIS83 3.3 10.7 1.0
CHC J:HEM405 3.4 19.0 1.0
CHA J:HEM405 3.4 19.0 1.0
CHB J:HEM405 3.5 19.0 1.0
CHD J:HEM405 3.5 19.0 1.0
HD2 J:HIS83 3.6 11.7 1.0
CD2 J:HIS182 3.7 10.9 1.0
HD2 J:HIS182 3.9 12.1 1.0
ND1 J:HIS83 4.1 10.1 1.0
C2A J:HEM405 4.3 19.0 1.0
C3D J:HEM405 4.3 19.0 1.0
C3A J:HEM405 4.3 19.0 1.0
C3B J:HEM405 4.3 19.0 1.0
C2D J:HEM405 4.3 19.0 1.0
C2C J:HEM405 4.3 19.0 1.0
C2B J:HEM405 4.3 19.0 1.0
C3C J:HEM405 4.3 19.0 1.0
CG J:HIS83 4.4 12.3 1.0
HHC J:HEM405 4.4 19.0 1.0
HHD J:HEM405 4.4 19.0 1.0
HHA J:HEM405 4.4 19.0 1.0
HHB J:HEM405 4.4 19.0 1.0
ND1 J:HIS182 4.5 12.0 1.0
HA3 J:GLY130 4.6 13.8 1.0
HA3 J:GLY48 4.6 12.5 1.0
HE21 J:GLN44 4.6 12.2 1.0
HE22 J:GLN44 4.6 11.1 1.0
CG J:HIS182 4.7 13.6 1.0
HA2 J:GLY48 4.7 11.8 1.0
NE2 J:GLN44 4.8 11.3 1.0
HD1 J:HIS83 4.9 12.0 1.0

Iron binding site 5 out of 10 in 9h8t

Go back to Iron Binding Sites List in 9h8t
Iron binding site 5 out of 10 in the Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Fe406

b:11.7
occ:1.00
FE J:HEM406 0.0 11.7 1.0
ND J:HEM406 2.0 11.7 1.0
NB J:HEM406 2.0 11.7 1.0
NA J:HEM406 2.1 11.7 1.0
NC J:HEM406 2.1 11.7 1.0
NE2 J:HIS196 2.3 10.0 1.0
NE2 J:HIS97 2.7 15.6 1.0
C1D J:HEM406 3.0 11.7 1.0
C1B J:HEM406 3.1 11.7 1.0
C4D J:HEM406 3.1 11.7 1.0
C4A J:HEM406 3.1 11.7 1.0
C4C J:HEM406 3.1 11.7 1.0
C4B J:HEM406 3.1 11.7 1.0
C1C J:HEM406 3.1 11.7 1.0
C1A J:HEM406 3.1 11.7 1.0
CE1 J:HIS196 3.1 10.7 1.0
CD2 J:HIS196 3.2 13.0 1.0
HE1 J:HIS196 3.2 12.3 1.0
CHB J:HEM406 3.4 11.7 1.0
CHD J:HEM406 3.4 11.7 1.0
CE1 J:HIS97 3.4 12.1 1.0
CHC J:HEM406 3.4 11.7 1.0
CHA J:HEM406 3.5 11.7 1.0
HD2 J:HIS196 3.5 13.9 1.0
HE1 J:HIS97 3.5 14.2 1.0
CD2 J:HIS97 3.7 18.1 1.0
HD2 J:HIS97 3.9 17.8 1.0
ND1 J:HIS196 4.2 13.6 1.0
C2D J:HEM406 4.2 11.7 1.0
C3D J:HEM406 4.2 11.7 1.0
C2B J:HEM406 4.3 11.7 1.0
C3A J:HEM406 4.3 11.7 1.0
C3B J:HEM406 4.3 11.7 1.0
CG J:HIS196 4.3 15.5 1.0
C3C J:HEM406 4.3 11.7 1.0
C2C J:HEM406 4.3 11.7 1.0
C2A J:HEM406 4.3 11.7 1.0
HHD J:HEM406 4.3 11.7 1.0
HHB J:HEM406 4.4 11.7 1.0
HHA J:HEM406 4.4 11.7 1.0
HHC J:HEM406 4.4 11.7 1.0
ND1 J:HIS97 4.6 12.1 1.0
HG22 J:THR112 4.6 13.6 1.0
CG J:HIS97 4.7 14.5 1.0
HA2 J:GLY116 4.8 14.9 1.0
H2 J:HOH507 4.8 50.0 1.0
HD12 J:LEU119 4.9 13.7 1.0
HD1 J:HIS196 4.9 14.5 1.0
HA3 J:GLY116 5.0 15.3 1.0

Iron binding site 6 out of 10 in 9h8t

Go back to Iron Binding Sites List in 9h8t
Iron binding site 6 out of 10 in the Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome within 5.0Å range:
probe atom residue distance (Å) B Occ
d:Fe401

b:39.4
occ:1.00
FE d:HEC401 0.0 39.4 1.0
NE2 d:HIS125 2.0 18.1 1.0
NA d:HEC401 2.1 21.5 1.0
NC d:HEC401 2.1 23.0 1.0
NB d:HEC401 2.1 23.6 1.0
ND d:HEC401 2.1 23.8 1.0
CE1 d:HIS125 2.8 18.0 1.0
SD d:MET244 2.8 25.7 1.0
HE1 d:HIS125 2.9 18.3 1.0
C1A d:HEC401 3.1 21.0 1.0
C4D d:HEC401 3.1 21.1 1.0
C4B d:HEC401 3.1 22.1 1.0
C1C d:HEC401 3.1 21.6 1.0
C4C d:HEC401 3.1 18.8 1.0
C4A d:HEC401 3.1 21.2 1.0
C1D d:HEC401 3.1 21.8 1.0
C1B d:HEC401 3.1 22.1 1.0
CD2 d:HIS125 3.1 19.9 1.0
CHA d:HEC401 3.4 20.8 1.0
HD2 d:HIS125 3.4 21.7 1.0
CHD d:HEC401 3.4 20.0 1.0
CHC d:HEC401 3.4 21.2 1.0
CHB d:HEC401 3.5 19.3 1.0
ND1 d:HIS125 4.0 19.1 1.0
HB2 d:MET244 4.0 28.4 1.0
HG3 d:MET244 4.0 28.2 1.0
HE1 d:MET244 4.0 26.6 1.0
CG d:MET244 4.1 28.2 1.0
CE d:MET244 4.1 26.5 1.0
HB3 d:PRO194 4.1 23.1 1.0
CG d:HIS125 4.2 20.3 1.0
C2A d:HEC401 4.3 21.1 1.0
C3A d:HEC401 4.3 21.3 1.0
C2C d:HEC401 4.3 23.5 1.0
C3B d:HEC401 4.3 24.8 1.0
C2B d:HEC401 4.3 25.7 1.0
C3C d:HEC401 4.3 23.6 1.0
HE2 d:MET244 4.3 27.8 1.0
C3D d:HEC401 4.3 24.1 1.0
C2D d:HEC401 4.3 22.4 1.0
HHA d:HEC401 4.4 23.1 1.0
HHD d:HEC401 4.4 22.9 1.0
HHC d:HEC401 4.4 23.7 1.0
HHB d:HEC401 4.4 20.9 1.0
HB2 d:CYS124 4.5 26.7 1.0
CB d:MET244 4.6 26.8 1.0
HD2 d:PRO195 4.7 21.3 1.0
HD1 d:HIS125 4.7 19.6 1.0
HD21 d:LEU197 4.8 18.0 1.0
HG2 d:MET244 4.9 28.8 1.0
HE3 d:MET244 4.9 27.9 1.0
HB3 d:MET244 4.9 29.4 1.0

Iron binding site 7 out of 10 in 9h8t

Go back to Iron Binding Sites List in 9h8t
Iron binding site 7 out of 10 in the Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Fe300

b:39.1
occ:1.00
FE1 a:FES300 0.0 39.1 1.0
S2 a:FES300 2.2 12.5 1.0
S1 a:FES300 2.2 13.6 1.0
SG a:CYS236 2.3 19.1 1.0
SG a:CYS217 2.3 21.6 1.0
FE2 a:FES300 2.7 37.9 1.0
HG a:CYS217 3.1 17.9 1.0
HB3 a:HIS219 3.1 15.0 1.0
HG a:CYS236 3.2 15.8 1.0
HB3 a:CYS217 3.3 16.7 1.0
CB a:CYS217 3.3 15.7 1.0
HG a:SER241 3.4 22.4 1.0
HB3 a:CYS236 3.4 20.5 1.0
HB2 a:CYS222 3.5 14.8 1.0
HB2 a:CYS217 3.5 16.2 1.0
CB a:CYS236 3.5 21.1 1.0
HB2 a:CYS238 3.6 15.3 1.0
HB2 a:CYS236 3.8 19.0 1.0
H a:LEU220 3.9 14.1 1.0
H a:HIS239 3.9 15.9 1.0
H a:CYS222 3.9 12.7 1.0
CB a:HIS219 4.0 13.3 1.0
OG a:SER241 4.2 22.8 1.0
H a:HIS219 4.2 18.1 1.0
HB2 a:HIS219 4.2 13.7 1.0
CB a:CYS222 4.4 15.7 1.0
ND1 a:HIS219 4.4 16.4 1.0
HB2 a:SER241 4.4 22.0 1.0
ND1 a:HIS239 4.4 15.8 1.0
H a:GLY221 4.5 14.7 1.0
H a:CYS238 4.5 16.2 1.0
CB a:CYS238 4.5 12.6 1.0
H a:SER241 4.6 22.3 1.0
N a:HIS239 4.6 17.6 1.0
N a:CYS222 4.7 11.9 1.0
HB2 a:HIS239 4.7 14.3 1.0
N a:LEU220 4.7 13.0 1.0
CG a:HIS219 4.7 14.9 1.0
HB3 a:CYS238 4.8 12.6 1.0
CA a:CYS217 4.8 15.8 1.0
H a:GLY240 4.8 18.5 1.0
CB a:SER241 4.8 21.9 1.0
CA a:CYS236 4.9 19.0 1.0
N a:HIS219 4.9 18.1 1.0
HB3 a:CYS222 5.0 14.8 1.0

Iron binding site 8 out of 10 in 9h8t

Go back to Iron Binding Sites List in 9h8t
Iron binding site 8 out of 10 in the Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Fe300

b:37.9
occ:1.00
FE2 a:FES300 0.0 37.9 1.0
ND1 a:HIS239 2.1 15.8 1.0
ND1 a:HIS219 2.2 16.4 1.0
S2 a:FES300 2.2 12.5 1.0
S1 a:FES300 2.2 13.6 1.0
FE1 a:FES300 2.7 39.1 1.0
HB3 a:HIS219 2.8 15.0 1.0
HB2 a:HIS239 2.8 14.3 1.0
CG a:HIS239 3.1 12.6 1.0
CE1 a:HIS239 3.1 10.9 1.0
CG a:HIS219 3.1 14.9 1.0
CE1 a:HIS219 3.1 9.8 1.0
HE1 a:HIS239 3.3 11.9 1.0
HE1 a:HIS219 3.3 10.1 1.0
CB a:HIS219 3.4 13.3 1.0
CB a:HIS239 3.4 13.9 1.0
HB2 a:LEU220 3.5 11.8 1.0
H a:HIS239 3.5 15.9 1.0
H a:LEU220 3.6 14.1 1.0
HB2 a:CYS238 3.8 15.3 1.0
HB2 a:HIS219 3.9 13.7 1.0
N a:HIS239 3.9 17.6 1.0
N a:LEU220 4.1 13.0 1.0
HG2 a:PRO253 4.1 16.5 1.0
HB3 a:CYS238 4.1 12.6 1.0
HG a:SER241 4.1 22.4 1.0
HB3 a:HIS239 4.2 13.2 1.0
CA a:HIS239 4.2 14.9 1.0
NE2 a:HIS239 4.2 10.2 1.0
CD2 a:HIS239 4.2 9.9 1.0
NE2 a:HIS219 4.2 10.3 1.0
CD2 a:HIS219 4.3 13.2 1.0
HG a:LEU220 4.3 12.1 1.0
CB a:LEU220 4.4 10.7 1.0
CB a:CYS238 4.4 12.6 1.0
SG a:CYS217 4.4 21.6 1.0
CA a:HIS219 4.6 13.7 1.0
HD11 a:LEU220 4.6 9.5 1.0
SG a:CYS236 4.6 19.1 1.0
C a:HIS219 4.7 15.0 1.0
C a:CYS238 4.7 15.1 1.0
HD12 a:LEU220 4.7 8.9 1.0
CG a:LEU220 4.7 11.2 1.0
OG a:SER241 4.7 22.8 1.0
CA a:LEU220 4.8 10.4 1.0
HG3 a:PRO253 4.8 16.4 1.0
C a:HIS239 4.9 18.1 1.0
CG a:PRO253 4.9 15.9 1.0
CD1 a:LEU220 4.9 8.3 1.0
H a:HIS219 4.9 18.1 1.0
HE2 a:HIS239 5.0 11.1 1.0
H a:GLY240 5.0 18.5 1.0
HB2 a:CYS222 5.0 14.8 1.0

Iron binding site 9 out of 10 in 9h8t

Go back to Iron Binding Sites List in 9h8t
Iron binding site 9 out of 10 in the Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome within 5.0Å range:
probe atom residue distance (Å) B Occ
j:Fe405

b:19.0
occ:1.00
FE j:HEM405 0.0 19.0 1.0
NB j:HEM405 2.0 19.0 1.0
ND j:HEM405 2.0 19.0 1.0
NA j:HEM405 2.1 19.0 1.0
NC j:HEM405 2.1 19.0 1.0
NE2 j:HIS83 2.1 9.9 1.0
NE2 j:HIS182 2.6 13.6 1.0
CE1 j:HIS83 2.9 8.5 1.0
HE1 j:HIS83 2.9 10.4 1.0
C1A j:HEM405 3.1 19.0 1.0
C4B j:HEM405 3.1 19.0 1.0
C4D j:HEM405 3.1 19.0 1.0
C1C j:HEM405 3.1 19.0 1.0
C4A j:HEM405 3.1 19.0 1.0
C1B j:HEM405 3.1 19.0 1.0
C1D j:HEM405 3.1 19.0 1.0
C4C j:HEM405 3.1 19.0 1.0
CD2 j:HIS83 3.3 10.7 1.0
HE1 j:HIS182 3.3 13.8 1.0
CE1 j:HIS182 3.4 11.6 1.0
CHC j:HEM405 3.4 19.0 1.0
CHA j:HEM405 3.4 19.0 1.0
CHB j:HEM405 3.5 19.0 1.0
CHD j:HEM405 3.5 19.0 1.0
HD2 j:HIS83 3.6 11.7 1.0
CD2 j:HIS182 3.7 10.9 1.0
HD2 j:HIS182 4.0 12.1 1.0
ND1 j:HIS83 4.1 10.1 1.0
C2A j:HEM405 4.3 19.0 1.0
C3D j:HEM405 4.3 19.0 1.0
C3A j:HEM405 4.3 19.0 1.0
C3B j:HEM405 4.3 19.0 1.0
CG j:HIS83 4.3 12.3 1.0
C2D j:HEM405 4.3 19.0 1.0
C2C j:HEM405 4.3 19.0 1.0
C2B j:HEM405 4.3 19.0 1.0
C3C j:HEM405 4.3 19.0 1.0
HHC j:HEM405 4.4 19.0 1.0
HHA j:HEM405 4.4 19.0 1.0
HHD j:HEM405 4.4 19.0 1.0
HHB j:HEM405 4.4 19.0 1.0
HA3 j:GLY48 4.5 12.5 1.0
ND1 j:HIS182 4.6 12.0 1.0
HA3 j:GLY130 4.6 13.8 1.0
HE22 j:GLN44 4.6 11.1 1.0
HE21 j:GLN44 4.6 12.2 1.0
HA2 j:GLY48 4.7 11.8 1.0
CG j:HIS182 4.8 13.6 1.0
HD1 j:HIS83 4.8 12.0 1.0
NE2 j:GLN44 4.8 11.3 1.0

Iron binding site 10 out of 10 in 9h8t

Go back to Iron Binding Sites List in 9h8t
Iron binding site 10 out of 10 in the Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Cryo-Em Structure of the Atovaquone-Inhibited Complex III From the Chlorocebus Sabaeus Respirasome within 5.0Å range:
probe atom residue distance (Å) B Occ
j:Fe406

b:11.7
occ:1.00
FE j:HEM406 0.0 11.7 1.0
ND j:HEM406 2.0 11.7 1.0
NB j:HEM406 2.0 11.7 1.0
NA j:HEM406 2.1 11.7 1.0
NC j:HEM406 2.1 11.7 1.0
NE2 j:HIS196 2.3 10.0 1.0
NE2 j:HIS97 2.7 15.6 1.0
C1D j:HEM406 3.0 11.7 1.0
C1B j:HEM406 3.1 11.7 1.0
C4D j:HEM406 3.1 11.7 1.0
C4A j:HEM406 3.1 11.7 1.0
C4C j:HEM406 3.1 11.7 1.0
C4B j:HEM406 3.1 11.7 1.0
C1C j:HEM406 3.1 11.7 1.0
C1A j:HEM406 3.1 11.7 1.0
CE1 j:HIS196 3.2 10.7 1.0
CD2 j:HIS196 3.2 13.0 1.0
HE1 j:HIS196 3.3 12.3 1.0
CE1 j:HIS97 3.4 12.1 1.0
HD2 j:HIS196 3.4 13.9 1.0
CHB j:HEM406 3.4 11.7 1.0
CHD j:HEM406 3.4 11.7 1.0
HE1 j:HIS97 3.4 14.2 1.0
CHC j:HEM406 3.4 11.7 1.0
CHA j:HEM406 3.5 11.7 1.0
CD2 j:HIS97 3.7 18.1 1.0
HD2 j:HIS97 3.9 17.8 1.0
C2D j:HEM406 4.2 11.7 1.0
ND1 j:HIS196 4.2 13.6 1.0
C3D j:HEM406 4.2 11.7 1.0
C2B j:HEM406 4.3 11.7 1.0
C3A j:HEM406 4.3 11.7 1.0
C3B j:HEM406 4.3 11.7 1.0
CG j:HIS196 4.3 15.5 1.0
C3C j:HEM406 4.3 11.7 1.0
C2C j:HEM406 4.3 11.7 1.0
C2A j:HEM406 4.3 11.7 1.0
HHD j:HEM406 4.3 11.7 1.0
HHB j:HEM406 4.4 11.7 1.0
HHA j:HEM406 4.4 11.7 1.0
HHC j:HEM406 4.4 11.7 1.0
ND1 j:HIS97 4.5 12.1 1.0
HG22 j:THR112 4.7 13.6 1.0
CG j:HIS97 4.7 14.5 1.0
HA2 j:GLY116 4.9 14.9 1.0
HD12 j:LEU119 5.0 13.7 1.0
HD13 j:LEU37 5.0 16.3 1.0
HD1 j:HIS196 5.0 14.5 1.0
HH22 j:ARG100 5.0 16.5 1.0

Reference:

A.E.Maclean, S.Shikha, M.Ferreira Silva, M.J.Gramelspacher, A.Nilsen, K.M.Liebman, S.Pou, R.W.Winter, A.Meir, M.K.Riscoe, J.S.Doggett, L.Sheiner, A.Muhleip. Structure, Assembly and Inhibition of the Toxoplasma Gondii Respiratory Chain Supercomplex. Nat.Struct.Mol.Biol. 2025.
ISSN: ESSN 1545-9985
PubMed: 40389671
DOI: 10.1038/S41594-025-01531-7
Page generated: Fri Aug 8 06:41:58 2025

Last articles

I in 3WN5
I in 3WYX
I in 3WGW
I in 3WD6
I in 3WB5
I in 3W31
I in 3WB4
I in 3W1N
I in 3W0F
I in 3W2Z
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy