Iron in PDB 9ihf: Nucleosome Core Particle Bound By One Monomer and One Dimer of of Dtt- Reduced Native Myeloperoxidase
Iron Binding Sites:
The binding sites of Iron atom in the Nucleosome Core Particle Bound By One Monomer and One Dimer of of Dtt- Reduced Native Myeloperoxidase
(pdb code 9ihf). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 3 binding sites of Iron where determined in the
Nucleosome Core Particle Bound By One Monomer and One Dimer of of Dtt- Reduced Native Myeloperoxidase, PDB code: 9ihf:
Jump to Iron binding site number:
1;
2;
3;
Iron binding site 1 out
of 3 in 9ihf
Go back to
Iron Binding Sites List in 9ihf
Iron binding site 1 out
of 3 in the Nucleosome Core Particle Bound By One Monomer and One Dimer of of Dtt- Reduced Native Myeloperoxidase
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Nucleosome Core Particle Bound By One Monomer and One Dimer of of Dtt- Reduced Native Myeloperoxidase within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:Fe601
b:62.8
occ:1.00
|
FE
|
L:HEM601
|
0.0
|
62.8
|
1.0
|
NB
|
L:HEM601
|
2.0
|
56.7
|
1.0
|
NC
|
L:HEM601
|
2.0
|
53.9
|
1.0
|
ND
|
L:HEM601
|
2.0
|
52.7
|
1.0
|
NA
|
L:HEM601
|
2.1
|
62.9
|
1.0
|
NE2
|
L:HIS336
|
2.4
|
55.7
|
1.0
|
C4B
|
L:HEM601
|
3.0
|
51.1
|
1.0
|
C1B
|
L:HEM601
|
3.0
|
61.8
|
1.0
|
C1C
|
L:HEM601
|
3.0
|
44.5
|
1.0
|
C1A
|
L:HEM601
|
3.0
|
65.9
|
1.0
|
C1D
|
L:HEM601
|
3.1
|
51.0
|
1.0
|
C4D
|
L:HEM601
|
3.1
|
65.8
|
1.0
|
C4A
|
L:HEM601
|
3.1
|
59.3
|
1.0
|
C4C
|
L:HEM601
|
3.1
|
52.1
|
1.0
|
CE1
|
L:HIS336
|
3.1
|
58.4
|
1.0
|
CHC
|
L:HEM601
|
3.4
|
42.1
|
1.0
|
CHA
|
L:HEM601
|
3.4
|
70.9
|
1.0
|
CHD
|
L:HEM601
|
3.4
|
52.1
|
1.0
|
CHB
|
L:HEM601
|
3.4
|
59.2
|
1.0
|
CD2
|
L:HIS336
|
3.5
|
48.5
|
1.0
|
C2B
|
L:HEM601
|
4.2
|
64.5
|
1.0
|
C3B
|
L:HEM601
|
4.2
|
61.5
|
1.0
|
C2A
|
L:HEM601
|
4.3
|
64.4
|
1.0
|
C3A
|
L:HEM601
|
4.3
|
61.5
|
1.0
|
C2D
|
L:HEM601
|
4.3
|
64.7
|
1.0
|
C3D
|
L:HEM601
|
4.3
|
72.8
|
1.0
|
C2C
|
L:HEM601
|
4.3
|
39.5
|
1.0
|
C3C
|
L:HEM601
|
4.3
|
43.3
|
1.0
|
ND1
|
L:HIS336
|
4.3
|
45.0
|
1.0
|
CG
|
L:HIS336
|
4.5
|
42.7
|
1.0
|
|
Iron binding site 2 out
of 3 in 9ihf
Go back to
Iron Binding Sites List in 9ihf
Iron binding site 2 out
of 3 in the Nucleosome Core Particle Bound By One Monomer and One Dimer of of Dtt- Reduced Native Myeloperoxidase
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Nucleosome Core Particle Bound By One Monomer and One Dimer of of Dtt- Reduced Native Myeloperoxidase within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
N:Fe601
b:62.7
occ:1.00
|
FE
|
N:HEM601
|
0.0
|
62.7
|
1.0
|
NC
|
N:HEM601
|
2.0
|
49.0
|
1.0
|
NB
|
N:HEM601
|
2.0
|
54.0
|
1.0
|
ND
|
N:HEM601
|
2.0
|
53.5
|
1.0
|
NA
|
N:HEM601
|
2.0
|
50.3
|
1.0
|
NE2
|
N:HIS336
|
2.2
|
65.9
|
1.0
|
C4A
|
N:HEM601
|
3.0
|
50.7
|
1.0
|
C1A
|
N:HEM601
|
3.0
|
47.9
|
1.0
|
C1B
|
N:HEM601
|
3.0
|
53.0
|
1.0
|
C4D
|
N:HEM601
|
3.0
|
54.7
|
1.0
|
C1C
|
N:HEM601
|
3.0
|
49.0
|
1.0
|
C4C
|
N:HEM601
|
3.1
|
51.0
|
1.0
|
C1D
|
N:HEM601
|
3.1
|
54.1
|
1.0
|
C4B
|
N:HEM601
|
3.1
|
50.8
|
1.0
|
CE1
|
N:HIS336
|
3.1
|
70.6
|
1.0
|
CD2
|
N:HIS336
|
3.3
|
72.2
|
1.0
|
CHB
|
N:HEM601
|
3.4
|
53.1
|
1.0
|
CHA
|
N:HEM601
|
3.4
|
52.8
|
1.0
|
CHD
|
N:HEM601
|
3.4
|
53.0
|
1.0
|
CHC
|
N:HEM601
|
3.4
|
49.7
|
1.0
|
C3A
|
N:HEM601
|
4.2
|
48.9
|
1.0
|
C2A
|
N:HEM601
|
4.2
|
46.7
|
1.0
|
C2B
|
N:HEM601
|
4.3
|
49.6
|
1.0
|
C3D
|
N:HEM601
|
4.3
|
58.5
|
1.0
|
C2C
|
N:HEM601
|
4.3
|
49.4
|
1.0
|
C2D
|
N:HEM601
|
4.3
|
55.9
|
1.0
|
ND1
|
N:HIS336
|
4.3
|
59.4
|
1.0
|
C3B
|
N:HEM601
|
4.3
|
52.5
|
1.0
|
C3C
|
N:HEM601
|
4.3
|
50.9
|
1.0
|
CG
|
N:HIS336
|
4.4
|
60.4
|
1.0
|
|
Iron binding site 3 out
of 3 in 9ihf
Go back to
Iron Binding Sites List in 9ihf
Iron binding site 3 out
of 3 in the Nucleosome Core Particle Bound By One Monomer and One Dimer of of Dtt- Reduced Native Myeloperoxidase
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Nucleosome Core Particle Bound By One Monomer and One Dimer of of Dtt- Reduced Native Myeloperoxidase within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe601
b:75.1
occ:1.00
|
FE
|
P:HEM601
|
0.0
|
75.1
|
1.0
|
NC
|
P:HEM601
|
2.0
|
62.4
|
1.0
|
NB
|
P:HEM601
|
2.0
|
60.1
|
1.0
|
NA
|
P:HEM601
|
2.1
|
66.8
|
1.0
|
ND
|
P:HEM601
|
2.1
|
61.6
|
1.0
|
NE2
|
P:HIS336
|
2.3
|
71.5
|
1.0
|
C4A
|
P:HEM601
|
3.0
|
62.6
|
1.0
|
C1A
|
P:HEM601
|
3.0
|
67.0
|
1.0
|
C4C
|
P:HEM601
|
3.1
|
65.0
|
1.0
|
C1B
|
P:HEM601
|
3.1
|
57.1
|
1.0
|
C1D
|
P:HEM601
|
3.1
|
62.5
|
1.0
|
C1C
|
P:HEM601
|
3.1
|
56.6
|
1.0
|
C4D
|
P:HEM601
|
3.1
|
65.9
|
1.0
|
C4B
|
P:HEM601
|
3.1
|
58.8
|
1.0
|
CE1
|
P:HIS336
|
3.3
|
76.5
|
1.0
|
CD2
|
P:HIS336
|
3.3
|
74.4
|
1.0
|
CHB
|
P:HEM601
|
3.4
|
59.5
|
1.0
|
CHD
|
P:HEM601
|
3.4
|
66.5
|
1.0
|
CHA
|
P:HEM601
|
3.4
|
70.5
|
1.0
|
CHC
|
P:HEM601
|
3.4
|
59.3
|
1.0
|
C3A
|
P:HEM601
|
4.2
|
63.2
|
1.0
|
C2A
|
P:HEM601
|
4.2
|
66.9
|
1.0
|
C2C
|
P:HEM601
|
4.3
|
54.8
|
1.0
|
C3C
|
P:HEM601
|
4.3
|
59.7
|
1.0
|
C2B
|
P:HEM601
|
4.3
|
56.4
|
1.0
|
C2D
|
P:HEM601
|
4.3
|
63.4
|
1.0
|
C3B
|
P:HEM601
|
4.3
|
57.3
|
1.0
|
C3D
|
P:HEM601
|
4.3
|
66.9
|
1.0
|
ND1
|
P:HIS336
|
4.4
|
70.4
|
1.0
|
OE1
|
O:GLN91
|
4.4
|
68.5
|
1.0
|
CG
|
P:HIS336
|
4.4
|
67.7
|
1.0
|
|
Reference:
G.L.Burn,
T.Raisch,
S.Tacke,
M.Winkler,
D.Prumbaum,
S.Thee,
S.Raunser,
A.Zychlinsky.
Myeloperoxidase Transforms Chromatin Into Neutrophil Extracellular Traps To Be Published.
Page generated: Sat Aug 23 03:19:34 2025
|