Atomistry » Iron » PDB 9ina-9kpp » 9is4
Atomistry »
  Iron »
    PDB 9ina-9kpp »
      9is4 »

Iron in PDB 9is4: Cryo-Em Structure of A TEF30-Associated Intermediate C2S-Type Psii- Lhcii Supercomplex From Chlamydomonas Reinhardtii

Enzymatic activity of Cryo-Em Structure of A TEF30-Associated Intermediate C2S-Type Psii- Lhcii Supercomplex From Chlamydomonas Reinhardtii

All present enzymatic activity of Cryo-Em Structure of A TEF30-Associated Intermediate C2S-Type Psii- Lhcii Supercomplex From Chlamydomonas Reinhardtii:
1.10.3.9;

Other elements in 9is4:

The structure of Cryo-Em Structure of A TEF30-Associated Intermediate C2S-Type Psii- Lhcii Supercomplex From Chlamydomonas Reinhardtii also contains other interesting chemical elements:

Magnesium (Mg) 134 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Cryo-Em Structure of A TEF30-Associated Intermediate C2S-Type Psii- Lhcii Supercomplex From Chlamydomonas Reinhardtii (pdb code 9is4). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Cryo-Em Structure of A TEF30-Associated Intermediate C2S-Type Psii- Lhcii Supercomplex From Chlamydomonas Reinhardtii, PDB code: 9is4:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in 9is4

Go back to Iron Binding Sites List in 9is4
Iron binding site 1 out of 4 in the Cryo-Em Structure of A TEF30-Associated Intermediate C2S-Type Psii- Lhcii Supercomplex From Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryo-Em Structure of A TEF30-Associated Intermediate C2S-Type Psii- Lhcii Supercomplex From Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe401

b:77.2
occ:1.00
NE2 D:HIS214 2.2 45.2 1.0
NE2 A:HIS215 2.2 55.5 1.0
NE2 A:HIS272 2.3 53.1 1.0
NE2 D:HIS268 2.3 50.0 1.0
O2 D:BCT403 2.3 79.4 1.0
O3 D:BCT403 2.3 73.7 1.0
C D:BCT403 2.8 77.8 1.0
CE1 A:HIS272 3.0 48.4 1.0
CE1 A:HIS215 3.1 55.2 1.0
CE1 D:HIS268 3.1 49.5 1.0
CE1 D:HIS214 3.2 44.3 1.0
CD2 D:HIS214 3.2 48.1 1.0
CD2 A:HIS215 3.3 47.7 1.0
CD2 D:HIS268 3.4 52.8 1.0
CD2 A:HIS272 3.4 57.2 1.0
O1 D:BCT403 4.0 73.2 1.0
ND1 A:HIS272 4.2 49.2 1.0
ND1 A:HIS215 4.3 53.6 1.0
ND1 D:HIS268 4.3 52.2 1.0
ND1 D:HIS214 4.3 42.9 1.0
CG D:HIS214 4.4 43.1 1.0
CG A:HIS215 4.4 49.1 1.0
CG D:HIS268 4.5 47.6 1.0
CG A:HIS272 4.5 52.5 1.0
CG2 A:VAL219 4.5 51.7 1.0
OH D:TYR244 4.8 70.2 1.0
CG2 D:VAL218 4.9 52.3 1.0

Iron binding site 2 out of 4 in 9is4

Go back to Iron Binding Sites List in 9is4
Iron binding site 2 out of 4 in the Cryo-Em Structure of A TEF30-Associated Intermediate C2S-Type Psii- Lhcii Supercomplex From Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cryo-Em Structure of A TEF30-Associated Intermediate C2S-Type Psii- Lhcii Supercomplex From Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Fe101

b:156.7
occ:1.00
FE F:HEM101 0.0 156.7 1.0
NC F:HEM101 2.1 136.4 1.0
ND F:HEM101 2.1 139.2 1.0
NA F:HEM101 2.1 136.5 1.0
NB F:HEM101 2.1 138.1 1.0
NE2 E:HIS23 2.1 141.8 1.0
NE2 F:HIS23 2.1 131.9 1.0
CE1 F:HIS23 2.5 129.3 1.0
CE1 E:HIS23 3.0 140.9 1.0
C4A F:HEM101 3.0 134.9 1.0
C1D F:HEM101 3.0 135.3 1.0
CD2 E:HIS23 3.0 141.9 1.0
C1A F:HEM101 3.0 135.5 1.0
C4D F:HEM101 3.0 136.5 1.0
C4C F:HEM101 3.0 133.6 1.0
C1B F:HEM101 3.0 135.9 1.0
C1C F:HEM101 3.1 134.6 1.0
C4B F:HEM101 3.1 135.2 1.0
CD2 F:HIS23 3.3 128.9 1.0
CHD F:HEM101 3.4 133.2 1.0
CHB F:HEM101 3.4 133.3 1.0
CHA F:HEM101 3.4 135.3 1.0
CHC F:HEM101 3.5 131.7 1.0
ND1 F:HIS23 3.7 126.9 1.0
ND1 E:HIS23 4.0 142.5 1.0
CG F:HIS23 4.1 127.8 1.0
CG E:HIS23 4.1 142.0 1.0
C3A F:HEM101 4.2 136.7 1.0
C2A F:HEM101 4.2 136.8 1.0
C2D F:HEM101 4.2 134.5 1.0
C3D F:HEM101 4.2 135.1 1.0
C2B F:HEM101 4.2 136.7 1.0
C2C F:HEM101 4.2 135.7 1.0
C3C F:HEM101 4.2 135.3 1.0
C3B F:HEM101 4.2 137.2 1.0
NE1 F:TRP19 4.9 127.7 1.0

Iron binding site 3 out of 4 in 9is4

Go back to Iron Binding Sites List in 9is4
Iron binding site 3 out of 4 in the Cryo-Em Structure of A TEF30-Associated Intermediate C2S-Type Psii- Lhcii Supercomplex From Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Cryo-Em Structure of A TEF30-Associated Intermediate C2S-Type Psii- Lhcii Supercomplex From Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Fe401

b:72.3
occ:1.00
NE2 d:HIS214 2.2 31.6 1.0
NE2 a:HIS215 2.2 43.9 1.0
NE2 d:HIS268 2.3 36.7 1.0
NE2 a:HIS272 2.3 38.9 1.0
O3 a:BCT409 2.3 51.5 1.0
O2 a:BCT409 2.3 58.5 1.0
C a:BCT409 2.7 55.3 1.0
CE1 d:HIS268 3.1 35.9 1.0
CE1 a:HIS272 3.1 38.8 1.0
CE1 d:HIS214 3.1 23.6 1.0
CD2 a:HIS215 3.2 31.2 1.0
CE1 a:HIS215 3.3 39.5 1.0
CD2 d:HIS214 3.3 40.7 1.0
CD2 a:HIS272 3.4 36.0 1.0
CD2 d:HIS268 3.4 42.9 1.0
O1 a:BCT409 3.9 50.0 1.0
ND1 d:HIS214 4.3 24.6 1.0
ND1 d:HIS268 4.3 36.3 1.0
ND1 a:HIS272 4.3 39.7 1.0
CG a:HIS215 4.3 29.0 1.0
ND1 a:HIS215 4.3 34.9 1.0
CG d:HIS214 4.4 28.2 1.0
CG2 a:VAL219 4.5 41.3 1.0
CG a:HIS272 4.5 34.6 1.0
CG d:HIS268 4.5 35.8 1.0
CG2 d:VAL218 4.9 48.7 1.0

Iron binding site 4 out of 4 in 9is4

Go back to Iron Binding Sites List in 9is4
Iron binding site 4 out of 4 in the Cryo-Em Structure of A TEF30-Associated Intermediate C2S-Type Psii- Lhcii Supercomplex From Chlamydomonas Reinhardtii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Cryo-Em Structure of A TEF30-Associated Intermediate C2S-Type Psii- Lhcii Supercomplex From Chlamydomonas Reinhardtii within 5.0Å range:
probe atom residue distance (Å) B Occ
f:Fe101

b:125.6
occ:1.00
FE f:HEM101 0.0 125.6 1.0
NC f:HEM101 2.0 102.8 1.0
NA f:HEM101 2.1 109.0 1.0
ND f:HEM101 2.1 105.2 1.0
NB f:HEM101 2.1 105.2 1.0
NE2 e:HIS23 2.1 119.6 1.0
NE2 f:HIS23 2.1 106.7 1.0
CE1 f:HIS23 2.3 103.5 1.0
CE1 e:HIS23 2.9 121.2 1.0
C1D f:HEM101 3.0 101.4 1.0
C4A f:HEM101 3.0 104.9 1.0
C4D f:HEM101 3.1 104.7 1.0
C4C f:HEM101 3.1 101.7 1.0
C1A f:HEM101 3.1 106.7 1.0
C1B f:HEM101 3.1 102.8 1.0
C1C f:HEM101 3.1 101.9 1.0
C4B f:HEM101 3.1 101.8 1.0
CD2 e:HIS23 3.1 120.1 1.0
CD2 f:HIS23 3.2 99.8 1.0
CHD f:HEM101 3.4 101.3 1.0
CHB f:HEM101 3.4 101.6 1.0
CHA f:HEM101 3.4 105.0 1.0
ND1 f:HIS23 3.4 99.7 1.0
CHC f:HEM101 3.4 100.8 1.0
CG f:HIS23 3.9 97.2 1.0
ND1 e:HIS23 4.1 123.1 1.0
CG e:HIS23 4.2 120.8 1.0
C2D f:HEM101 4.2 101.1 1.0
C3D f:HEM101 4.2 103.9 1.0
C3A f:HEM101 4.2 106.5 1.0
C2A f:HEM101 4.3 107.7 1.0
C3C f:HEM101 4.3 100.7 1.0
C2B f:HEM101 4.3 103.7 1.0
C2C f:HEM101 4.3 100.7 1.0
C3B f:HEM101 4.3 103.2 1.0
NE1 f:TRP19 4.5 102.8 1.0
CD1 f:TRP19 5.0 103.8 1.0

Reference:

Y.Wang, C.Wang, A.Li, Z.Liu. TEF30 Fulfills Versatile Functions in the Photosystem II Repair Process To Be Published.
Page generated: Fri Aug 8 06:53:51 2025

Last articles

I in 4BSW
I in 4AW7
I in 4BSV
I in 4B43
I in 4B9H
I in 4AS2
I in 4AS5
I in 4AX2
I in 4ARR
I in 4AQ3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy