Iron in PDB 9o8u: (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate

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>>> Page 1 <<< Page 2, Binding sites: 11 - 13;

Binding sites:

The binding sites of Iron atom in the (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate (pdb code 9o8u). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 13 binding sites of Iron where determined in the (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate, PDB code: 9o8u:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 13 in the (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe201 b:58.2 occ:1.00 FE1 B:SF4201 0.0 58.2 1.0 S4 B:SF4201 2.3 58.2 1.0 S3 B:SF4201 2.3 58.2 1.0 S2 B:SF4201 2.3 58.2 1.0 SG B:CYS35 2.3 59.8 1.0 FE3 B:SF4201 2.7 58.2 1.0 FE2 B:SF4201 2.7 58.2 1.0 FE4 B:SF4201 2.7 58.2 1.0 CB B:CYS35 3.0 59.8 1.0 S1 B:SF4201 3.9 58.2 1.0 CB B:ASN37 4.1 56.4 1.0 CA B:PHE89 4.2 59.8 1.0 ND2 B:ASN37 4.3 56.4 1.0 CA B:CYS35 4.4 59.8 1.0 CD1 B:PHE89 4.5 59.8 1.0 CG B:ASN37 4.6 56.4 1.0 N B:ASN37 4.6 56.4 1.0 CB B:PHE89 4.7 59.8 1.0 CA B:ASN37 4.7 56.4 1.0 C B:ASN37 4.7 56.4 1.0 O B:ASN88 4.7 61.7 1.0 N B:PHE89 4.7 59.8 1.0 SG B:CYS51 4.8 53.6 1.0 SG B:CYS32 4.8 57.3 1.0 SG B:CYS86 4.8 66.2 1.0 C B:CYS35 4.9 59.8 1.0 C B:ASN88 4.9 61.7 1.0 N B:PHE38 5.0 54.9 1.0 N B:GLU90 5.0 62.5 1.0 O B:ASN37 5.0 56.4 1.0

Iron binding site 2 out of 13 in the (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe201 b:58.2 occ:1.00 FE2 B:SF4201 0.0 58.2 1.0 S4 B:SF4201 2.3 58.2 1.0 S3 B:SF4201 2.3 58.2 1.0 S1 B:SF4201 2.3 58.2 1.0 SG B:CYS86 2.3 66.2 1.0 FE1 B:SF4201 2.7 58.2 1.0 FE3 B:SF4201 2.7 58.2 1.0 FE4 B:SF4201 2.7 58.2 1.0 CB B:CYS86 3.4 66.2 1.0 S2 B:SF4201 3.9 58.2 1.0 N B:PHE89 4.2 59.8 1.0 CD1 B:LEU54 4.4 55.1 1.0 CA B:PHE89 4.4 59.8 1.0 CD1 B:ILE60 4.4 65.0 1.0 CB B:PHE89 4.6 59.8 1.0 C B:ASN88 4.6 61.7 1.0 SG B:CYS51 4.7 53.6 1.0 SG B:CYS32 4.8 57.3 1.0 CA B:CYS86 4.8 66.2 1.0 CG B:LEU54 4.8 55.1 1.0 SG B:CYS35 4.8 59.8 1.0 CB B:ASN88 4.8 61.7 1.0

Iron binding site 3 out of 13 in the (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe201 b:58.2 occ:1.00 FE3 B:SF4201 0.0 58.2 1.0 S4 B:SF4201 2.3 58.2 1.0 S1 B:SF4201 2.3 58.2 1.0 S2 B:SF4201 2.3 58.2 1.0 SG B:CYS51 2.3 53.6 1.0 FE1 B:SF4201 2.7 58.2 1.0 FE2 B:SF4201 2.7 58.2 1.0 FE4 B:SF4201 2.7 58.2 1.0 CB B:CYS51 3.3 53.6 1.0 S3 B:SF4201 3.9 58.2 1.0 CA B:CYS51 4.3 53.6 1.0 CB B:ASN37 4.4 56.4 1.0 O B:ASN37 4.4 56.4 1.0 CG B:LEU54 4.4 55.1 1.0 CD1 B:LEU54 4.6 55.1 1.0 CG2 B:THR77 4.6 59.9 1.0 SG B:CYS35 4.8 59.8 1.0 SG B:CYS86 4.8 66.2 1.0 C B:ASN37 4.9 56.4 1.0 CB B:LEU54 4.9 55.1 1.0 SG B:CYS32 4.9 57.3 1.0 ND2 B:ASN37 5.0 56.4 1.0

Iron binding site 4 out of 13 in the (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe201 b:58.2 occ:1.00 FE4 B:SF4201 0.0 58.2 1.0 S3 B:SF4201 2.3 58.2 1.0 S1 B:SF4201 2.3 58.2 1.0 S2 B:SF4201 2.3 58.2 1.0 SG B:CYS32 2.3 57.3 1.0 FE1 B:SF4201 2.7 58.2 1.0 FE2 B:SF4201 2.7 58.2 1.0 FE3 B:SF4201 2.7 58.2 1.0 CB B:CYS32 3.5 57.3 1.0 S4 B:SF4201 3.9 58.2 1.0 CA B:CYS32 3.9 57.3 1.0 CD1 B:ILE60 4.2 65.0 1.0 CG2 B:THR77 4.2 59.9 1.0 OG1 B:THR77 4.3 59.9 1.0 CB B:THR77 4.4 59.9 1.0 CB B:CYS35 4.6 59.8 1.0 SG B:CYS35 4.8 59.8 1.0 SG B:CYS86 4.8 66.2 1.0 N B:CYS32 4.9 57.3 1.0 O B:CYS32 4.9 57.3 1.0 SG B:CYS51 4.9 53.6 1.0 C B:CYS32 4.9 57.3 1.0

Iron binding site 5 out of 13 in the (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:87.0 occ:1.00 FE1 C:SF4101 0.0 87.0 1.0 S3 C:SF4101 2.3 87.0 1.0 S4 C:SF4101 2.3 87.0 1.0 S2 C:SF4101 2.3 87.0 1.0 SG C:CYS7 2.3 79.3 1.0 FE2 C:SF4101 2.7 87.0 1.0 FE3 C:SF4101 2.7 87.0 1.0 FE4 C:SF4101 2.7 87.0 1.0 CB C:CYS7 3.0 79.3 1.0 S1 C:SF4101 3.9 87.0 1.0 CA C:TYR51 4.0 87.1 1.0 CB C:ASN9 4.2 67.9 1.0 CD1 C:TYR51 4.3 87.1 1.0 CB C:TYR51 4.4 87.1 1.0 CA C:CYS7 4.5 79.3 1.0 ND2 C:ASN9 4.5 67.9 1.0 N C:TYR51 4.6 87.1 1.0 O C:ASP50 4.8 84.2 1.0 CG C:ASN9 4.8 67.9 1.0 SG C:CYS22 4.8 57.7 1.0 N C:ASN9 4.8 67.9 1.0 SG C:CYS4 4.8 80.7 1.0 SG C:CYS48 4.8 93.0 1.0 N C:LEU52 4.8 84.4 1.0 CG C:TYR51 4.9 87.1 1.0 CA C:ASN9 4.9 67.9 1.0 C C:ASP50 4.9 84.2 1.0 C C:ASN9 5.0 67.9 1.0

Iron binding site 6 out of 13 in the (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:87.0 occ:1.00 FE2 C:SF4101 0.0 87.0 1.0 S3 C:SF4101 2.3 87.0 1.0 S4 C:SF4101 2.3 87.0 1.0 S1 C:SF4101 2.3 87.0 1.0 SG C:CYS22 2.3 57.7 1.0 FE1 C:SF4101 2.7 87.0 1.0 FE4 C:SF4101 2.7 87.0 1.0 FE3 C:SF4101 2.7 87.0 1.0 CB C:CYS22 2.9 57.7 1.0 S2 C:SF4101 3.9 87.0 1.0 CA C:CYS22 4.1 57.7 1.0 CB C:ASN9 4.4 67.9 1.0 NH2 C:ARG37 4.5 51.2 1.0 CD C:ARG24 4.7 52.2 1.0 SG C:CYS48 4.8 93.0 1.0 SG C:CYS7 4.8 79.3 1.0 SG C:CYS4 4.9 80.7 1.0 C C:CYS22 4.9 57.7 1.0 O C:ASN9 4.9 67.9 1.0

Iron binding site 7 out of 13 in the (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:87.0 occ:1.00 FE3 C:SF4101 0.0 87.0 1.0 S4 C:SF4101 2.3 87.0 1.0 S2 C:SF4101 2.3 87.0 1.0 S1 C:SF4101 2.3 87.0 1.0 SG C:CYS4 2.3 80.7 1.0 FE1 C:SF4101 2.7 87.0 1.0 FE4 C:SF4101 2.7 87.0 1.0 FE2 C:SF4101 2.7 87.0 1.0 CB C:CYS4 3.5 80.7 1.0 S3 C:SF4101 3.9 87.0 1.0 CA C:CYS4 3.9 80.7 1.0 OG1 C:THR39 4.6 63.9 1.0 CB C:CYS7 4.6 79.3 1.0 CB C:CYS22 4.7 57.7 1.0 N C:CYS4 4.8 80.7 1.0 SG C:CYS7 4.8 79.3 1.0 SG C:CYS48 4.9 93.0 1.0 SG C:CYS22 4.9 57.7 1.0 O C:CYS4 5.0 80.7 1.0 C C:CYS4 5.0 80.7 1.0

Iron binding site 8 out of 13 in the (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe101 b:87.0 occ:1.00 FE4 C:SF4101 0.0 87.0 1.0 S3 C:SF4101 2.3 87.0 1.0 S1 C:SF4101 2.3 87.0 1.0 S2 C:SF4101 2.3 87.0 1.0 SG C:CYS48 2.3 93.0 1.0 FE2 C:SF4101 2.7 87.0 1.0 FE1 C:SF4101 2.7 87.0 1.0 FE3 C:SF4101 2.7 87.0 1.0 CB C:CYS48 3.7 93.0 1.0 S4 C:SF4101 3.9 87.0 1.0 N C:TYR51 4.3 87.1 1.0 CB C:TYR51 4.3 87.1 1.0 CA C:TYR51 4.3 87.1 1.0 C C:ASP50 4.8 84.2 1.0 SG C:CYS22 4.8 57.7 1.0 SG C:CYS7 4.8 79.3 1.0 SG C:CYS4 4.8 80.7 1.0

Iron binding site 9 out of 13 in the (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate within 5.0Å range: probe atom residue distance (Å) B Occ D:Fe101 b:99.1 occ:1.00 SG D:CYS35 2.3 76.1 1.0 SG D:CYS3 2.3 82.0 1.0 SG D:CYS32 2.3 74.5 1.0 SG D:CYS6 2.3 84.7 1.0 CB D:CYS32 2.9 74.5 1.0 CB D:CYS3 3.3 82.0 1.0 CB D:CYS35 3.4 76.1 1.0 N D:CYS35 3.8 76.1 1.0 CB D:CYS6 3.9 84.7 1.0 N D:CYS6 4.0 84.7 1.0 O D:CYS6 4.1 84.7 1.0 CA D:CYS35 4.2 76.1 1.0 CA D:CYS6 4.4 84.7 1.0 CA D:CYS32 4.4 74.5 1.0 CB D:GLU5 4.5 85.6 1.0 CB D:GLU34 4.6 75.3 1.0 C D:CYS6 4.7 84.7 1.0 CG D:GLU5 4.7 85.6 1.0 CA D:CYS3 4.7 82.0 1.0 CB D:HIS8 4.9 82.3 1.0 C D:GLU34 4.9 75.3 1.0 C D:GLU5 4.9 85.6 1.0 N D:GLU5 5.0 85.6 1.0 C D:CYS32 5.0 74.5 1.0 C D:CYS35 5.0 76.1 1.0 N D:GLU34 5.0 75.3 1.0

Iron binding site 10 out of 13 in the (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of (1-Methylalkyl)Succinate Synthase Alpha-Beta-Gamma-Delta Complex with Bound Fumarate within 5.0Å range: probe atom residue distance (Å) B Occ F:Fe101 b:87.0 occ:1.00 FE1 F:SF4101 0.0 87.0 1.0 S4 F:SF4101 2.3 87.0 1.0 S3 F:SF4101 2.3 87.0 1.0 S2 F:SF4101 2.3 87.0 1.0 SG F:CYS7 2.3 79.3 1.0 FE2 F:SF4101 2.7 87.0 1.0 FE3 F:SF4101 2.7 87.0 1.0 FE4 F:SF4101 2.7 87.0 1.0 CB F:CYS7 3.0 79.3 1.0 S1 F:SF4101 3.9 87.0 1.0 CA F:TYR51 3.9 132.9 1.0 CD1 F:TYR51 3.9 132.9 1.0 CB F:TYR51 4.4 132.9 1.0 CA F:CYS7 4.4 79.3 1.0 N F:TYR51 4.5 132.9 1.0 CG F:TYR51 4.7 132.9 1.0 N F:LEU52 4.8 130.2 1.0 O F:ASP50 4.8 130.1 1.0 SG F:CYS4 4.8 80.7 1.0 CE1 F:TYR51 4.8 132.9 1.0 C F:ASP50 4.9 130.1 1.0 SG F:CYS48 4.9 93.0 1.0 C F:TYR51 4.9 132.9 1.0 N F:TYR10 4.9 101.7 1.0 SG F:CYS22 5.0 90.1 1.0

M.C.Andorfer, C.L.Drennan. Structural Basis For Anaerobic Alkane Activation By A Multi-Subunit Glycyl Radical Enzyme To Be Published.