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Iron in PDB 9ud8: Cryo-Em Structure of Na+-Translocating Nadh-Ubiquinone Oxidoreductase From Vibrio Cholerae Reduced By Nadh, in the Absence of Na+, Middle State
Enzymatic activity of Cryo-Em Structure of Na+-Translocating Nadh-Ubiquinone Oxidoreductase From Vibrio Cholerae Reduced By Nadh, in the Absence of Na+, Middle State
All present enzymatic activity of Cryo-Em Structure of Na+-Translocating Nadh-Ubiquinone Oxidoreductase From Vibrio Cholerae Reduced By Nadh, in the Absence of Na+, Middle State:
7.2.1.1;
7.2.1.1;
Other elements in 9ud8:
The structure of Cryo-Em Structure of Na+-Translocating Nadh-Ubiquinone Oxidoreductase From Vibrio Cholerae Reduced By Nadh, in the Absence of Na+, Middle State also contains other interesting chemical elements:
| Calcium | (Ca) | 1 atom |
Iron Binding Sites:
The binding sites of Iron atom in the Cryo-Em Structure of Na+-Translocating Nadh-Ubiquinone Oxidoreductase From Vibrio Cholerae Reduced By Nadh, in the Absence of Na+, Middle State
(pdb code 9ud8). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Cryo-Em Structure of Na+-Translocating Nadh-Ubiquinone Oxidoreductase From Vibrio Cholerae Reduced By Nadh, in the Absence of Na+, Middle State, PDB code: 9ud8:
Jump to Iron binding site number: 1; 2; 3; 4;
In total 4 binding sites of Iron where determined in the Cryo-Em Structure of Na+-Translocating Nadh-Ubiquinone Oxidoreductase From Vibrio Cholerae Reduced By Nadh, in the Absence of Na+, Middle State, PDB code: 9ud8:
Jump to Iron binding site number: 1; 2; 3; 4;
Iron binding site 1 out of 4 in 9ud8
Go back to
Iron Binding Sites List in 9ud8
Iron binding site 1 out
of 4 in the Cryo-Em Structure of Na+-Translocating Nadh-Ubiquinone Oxidoreductase From Vibrio Cholerae Reduced By Nadh, in the Absence of Na+, Middle State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Cryo-Em Structure of Na+-Translocating Nadh-Ubiquinone Oxidoreductase From Vibrio Cholerae Reduced By Nadh, in the Absence of Na+, Middle State within 5.0Å range:
|
Iron binding site 2 out of 4 in 9ud8
Go back to
Iron Binding Sites List in 9ud8
Iron binding site 2 out
of 4 in the Cryo-Em Structure of Na+-Translocating Nadh-Ubiquinone Oxidoreductase From Vibrio Cholerae Reduced By Nadh, in the Absence of Na+, Middle State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Cryo-Em Structure of Na+-Translocating Nadh-Ubiquinone Oxidoreductase From Vibrio Cholerae Reduced By Nadh, in the Absence of Na+, Middle State within 5.0Å range:
|
Iron binding site 3 out of 4 in 9ud8
Go back to
Iron Binding Sites List in 9ud8
Iron binding site 3 out
of 4 in the Cryo-Em Structure of Na+-Translocating Nadh-Ubiquinone Oxidoreductase From Vibrio Cholerae Reduced By Nadh, in the Absence of Na+, Middle State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Cryo-Em Structure of Na+-Translocating Nadh-Ubiquinone Oxidoreductase From Vibrio Cholerae Reduced By Nadh, in the Absence of Na+, Middle State within 5.0Å range:
|
Iron binding site 4 out of 4 in 9ud8
Go back to
Iron Binding Sites List in 9ud8
Iron binding site 4 out
of 4 in the Cryo-Em Structure of Na+-Translocating Nadh-Ubiquinone Oxidoreductase From Vibrio Cholerae Reduced By Nadh, in the Absence of Na+, Middle State
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Cryo-Em Structure of Na+-Translocating Nadh-Ubiquinone Oxidoreductase From Vibrio Cholerae Reduced By Nadh, in the Absence of Na+, Middle State within 5.0Å range:
|
Reference:
M.Ishikawa-Fukuda,
T.Seki,
J.I.Kishikawa,
T.Masuya,
K.I.Okazaki,
T.Kato,
B.Barquera,
H.Miyoshi,
M.Murai.
The Na + -Pumping Mechanism Driven By Redox Reactions in the Nadh-Quinone Oxidoreductase From Vibrio Cholerae Relies on Dynamic Conformational Changes. Biorxiv 2025.
ISSN: ISSN 2692-8205
PubMed: 40501732
DOI: 10.1101/2025.06.01.656757
Page generated: Sat Aug 23 03:29:26 2025
ISSN: ISSN 2692-8205
PubMed: 40501732
DOI: 10.1101/2025.06.01.656757
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