Iron in PDB 8r3a: Nt-26 Arsenite Oxidase B F108C-G123C
Protein crystallography data
The structure of Nt-26 Arsenite Oxidase B F108C-G123C, PDB code: 8r3a
was solved by
F.Engrola,
T.Santos-Silva,
M.A.S.Correia,
M.J.Romao,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
49.32 /
1.89
|
Space group
|
P 2 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
141.607,
148.928,
231.901,
90,
90,
90
|
R / Rfree (%)
|
15.2 /
18.5
|
Other elements in 8r3a:
The structure of Nt-26 Arsenite Oxidase B F108C-G123C also contains other interesting chemical elements:
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Binding sites:
The binding sites of Iron atom in the Nt-26 Arsenite Oxidase B F108C-G123C
(pdb code 8r3a). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 20 binding sites of Iron where determined in the
Nt-26 Arsenite Oxidase B F108C-G123C, PDB code: 8r3a:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 20 in 8r3a
Go back to
Iron Binding Sites List in 8r3a
Iron binding site 1 out
of 20 in the Nt-26 Arsenite Oxidase B F108C-G123C
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Nt-26 Arsenite Oxidase B F108C-G123C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe903
b:22.5
occ:1.00
|
FE1
|
A:F3S903
|
0.0
|
22.5
|
1.0
|
S1
|
A:F3S903
|
2.3
|
25.0
|
1.0
|
SG
|
A:CYS24
|
2.3
|
23.1
|
1.0
|
S3
|
A:F3S903
|
2.3
|
23.2
|
1.0
|
S2
|
A:F3S903
|
2.3
|
25.8
|
1.0
|
FE3
|
A:F3S903
|
2.7
|
23.8
|
1.0
|
FE4
|
A:F3S903
|
2.8
|
24.4
|
1.0
|
CB
|
A:CYS24
|
3.2
|
24.8
|
1.0
|
HB2
|
A:CYS24
|
3.2
|
23.8
|
1.0
|
HB3
|
A:CYS24
|
3.2
|
23.8
|
1.0
|
HA3
|
A:GLY105
|
3.3
|
20.6
|
1.0
|
H
|
A:CYS27
|
3.5
|
19.7
|
1.0
|
HB2
|
A:PHE26
|
3.5
|
22.0
|
1.0
|
H
|
A:GLY105
|
3.6
|
22.2
|
1.0
|
OG
|
A:SER102
|
3.9
|
21.7
|
1.0
|
HA2
|
A:GLY105
|
3.9
|
20.6
|
1.0
|
CA
|
A:GLY105
|
3.9
|
19.9
|
1.0
|
S4
|
A:F3S903
|
4.0
|
22.8
|
1.0
|
HB2
|
A:CYS31
|
4.0
|
22.6
|
1.0
|
N
|
A:GLY105
|
4.0
|
23.6
|
1.0
|
HD2
|
A:PHE26
|
4.1
|
20.0
|
1.0
|
H
|
A:PHE26
|
4.1
|
20.5
|
1.0
|
HB2
|
A:ARG104
|
4.3
|
22.1
|
1.0
|
HE1
|
A:TYR33
|
4.3
|
22.6
|
1.0
|
H
|
A:CYS31
|
4.3
|
23.2
|
1.0
|
N
|
A:CYS27
|
4.3
|
17.9
|
1.0
|
CB
|
A:PHE26
|
4.5
|
21.8
|
1.0
|
H
|
A:SER102
|
4.5
|
25.6
|
1.0
|
CA
|
A:CYS24
|
4.6
|
22.2
|
1.0
|
HE
|
A:ARG104
|
4.7
|
23.5
|
1.0
|
SG
|
A:CYS31
|
4.7
|
23.3
|
1.0
|
HB3
|
A:SER102
|
4.7
|
23.3
|
1.0
|
CB
|
A:CYS31
|
4.8
|
21.8
|
1.0
|
HH21
|
A:ARG104
|
4.8
|
28.0
|
1.0
|
SG
|
A:CYS27
|
4.8
|
22.5
|
1.0
|
OH
|
A:TYR33
|
4.8
|
24.1
|
1.0
|
HA
|
A:CYS24
|
4.9
|
22.0
|
1.0
|
N
|
A:PHE26
|
4.9
|
20.6
|
1.0
|
CB
|
A:SER102
|
4.9
|
24.7
|
1.0
|
HB3
|
A:PHE26
|
4.9
|
22.0
|
1.0
|
CD2
|
A:PHE26
|
4.9
|
18.6
|
1.0
|
H
|
A:GLY30
|
5.0
|
21.4
|
1.0
|
|
Iron binding site 2 out
of 20 in 8r3a
Go back to
Iron Binding Sites List in 8r3a
Iron binding site 2 out
of 20 in the Nt-26 Arsenite Oxidase B F108C-G123C
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Nt-26 Arsenite Oxidase B F108C-G123C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe903
b:23.8
occ:1.00
|
FE3
|
A:F3S903
|
0.0
|
23.8
|
1.0
|
S4
|
A:F3S903
|
2.2
|
22.8
|
1.0
|
S3
|
A:F3S903
|
2.3
|
23.2
|
1.0
|
S1
|
A:F3S903
|
2.4
|
25.0
|
1.0
|
SG
|
A:CYS31
|
2.4
|
23.3
|
1.0
|
FE1
|
A:F3S903
|
2.7
|
22.5
|
1.0
|
FE4
|
A:F3S903
|
2.7
|
24.4
|
1.0
|
HB2
|
A:CYS31
|
3.0
|
22.6
|
1.0
|
CB
|
A:CYS31
|
3.3
|
21.8
|
1.0
|
H
|
A:CYS31
|
3.3
|
23.2
|
1.0
|
HB2
|
A:ASN245
|
3.4
|
21.3
|
1.0
|
HB
|
A:VAL29
|
3.4
|
22.9
|
1.0
|
OD1
|
A:ASN245
|
3.6
|
24.7
|
1.0
|
S2
|
A:F3S903
|
3.9
|
25.8
|
1.0
|
H
|
A:SER102
|
4.0
|
25.6
|
1.0
|
HB3
|
A:CYS31
|
4.0
|
22.6
|
1.0
|
HB3
|
A:SER102
|
4.0
|
23.3
|
1.0
|
N
|
A:CYS31
|
4.1
|
22.2
|
1.0
|
CG
|
A:ASN245
|
4.2
|
23.0
|
1.0
|
CB
|
A:ASN245
|
4.2
|
21.7
|
1.0
|
HG12
|
A:VAL29
|
4.2
|
23.6
|
1.0
|
H
|
A:ASN245
|
4.3
|
22.0
|
1.0
|
HB2
|
A:CYS24
|
4.3
|
23.8
|
1.0
|
CA
|
A:CYS31
|
4.3
|
24.1
|
1.0
|
CB
|
A:VAL29
|
4.3
|
22.1
|
1.0
|
HG13
|
A:VAL29
|
4.3
|
23.6
|
1.0
|
OG
|
A:SER102
|
4.4
|
21.7
|
1.0
|
HE1
|
A:TYR33
|
4.5
|
22.6
|
1.0
|
HB3
|
A:CYS24
|
4.5
|
23.8
|
1.0
|
CG1
|
A:VAL29
|
4.5
|
24.2
|
1.0
|
H
|
A:GLY30
|
4.5
|
21.4
|
1.0
|
SG
|
A:CYS24
|
4.7
|
23.1
|
1.0
|
CB
|
A:SER102
|
4.7
|
24.7
|
1.0
|
SG
|
A:CYS27
|
4.7
|
22.5
|
1.0
|
CB
|
A:CYS24
|
4.7
|
24.8
|
1.0
|
HB3
|
A:ASN245
|
4.7
|
21.3
|
1.0
|
HG21
|
A:VAL29
|
4.7
|
24.2
|
1.0
|
N
|
A:SER102
|
4.8
|
27.6
|
1.0
|
HA
|
A:CYS31
|
4.8
|
23.1
|
1.0
|
HA2
|
A:GLY101
|
4.9
|
27.0
|
1.0
|
HH21
|
A:ARG104
|
4.9
|
28.0
|
1.0
|
HB3
|
A:ASN97
|
4.9
|
27.8
|
1.0
|
N
|
A:GLY30
|
4.9
|
19.9
|
1.0
|
HA3
|
A:GLY105
|
5.0
|
20.6
|
1.0
|
N
|
A:ASN245
|
5.0
|
22.8
|
1.0
|
HB
|
A:THR244
|
5.0
|
20.7
|
1.0
|
|
Iron binding site 3 out
of 20 in 8r3a
Go back to
Iron Binding Sites List in 8r3a
Iron binding site 3 out
of 20 in the Nt-26 Arsenite Oxidase B F108C-G123C
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Nt-26 Arsenite Oxidase B F108C-G123C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe903
b:24.4
occ:1.00
|
FE4
|
A:F3S903
|
0.0
|
24.4
|
1.0
|
SG
|
A:CYS27
|
2.2
|
22.5
|
1.0
|
S3
|
A:F3S903
|
2.3
|
23.2
|
1.0
|
S2
|
A:F3S903
|
2.3
|
25.8
|
1.0
|
S4
|
A:F3S903
|
2.3
|
22.8
|
1.0
|
FE3
|
A:F3S903
|
2.7
|
23.8
|
1.0
|
FE1
|
A:F3S903
|
2.8
|
22.5
|
1.0
|
HH21
|
A:ARG104
|
3.1
|
28.0
|
1.0
|
H
|
A:CYS27
|
3.2
|
19.7
|
1.0
|
HB
|
A:VAL29
|
3.3
|
22.9
|
1.0
|
CB
|
A:CYS27
|
3.3
|
22.2
|
1.0
|
HB3
|
A:CYS27
|
3.3
|
22.2
|
1.0
|
N
|
A:CYS27
|
3.8
|
17.9
|
1.0
|
CA
|
A:CYS27
|
3.9
|
21.9
|
1.0
|
H
|
A:VAL29
|
3.9
|
21.3
|
1.0
|
NH2
|
A:ARG104
|
3.9
|
29.4
|
1.0
|
HE
|
A:ARG104
|
4.0
|
23.5
|
1.0
|
HG22
|
A:VAL29
|
4.0
|
24.2
|
1.0
|
S1
|
A:F3S903
|
4.1
|
25.0
|
1.0
|
HB2
|
A:CYS27
|
4.2
|
22.2
|
1.0
|
CB
|
A:VAL29
|
4.2
|
22.1
|
1.0
|
H
|
A:GLY30
|
4.2
|
21.4
|
1.0
|
C
|
A:CYS27
|
4.2
|
22.8
|
1.0
|
O
|
A:CYS27
|
4.2
|
23.0
|
1.0
|
HG21
|
A:VAL29
|
4.2
|
24.2
|
1.0
|
HH22
|
A:ARG104
|
4.3
|
28.0
|
1.0
|
CG2
|
A:VAL29
|
4.4
|
25.2
|
1.0
|
OG
|
A:SER102
|
4.4
|
21.7
|
1.0
|
HB3
|
A:SER102
|
4.5
|
23.3
|
1.0
|
HB2
|
A:PHE26
|
4.5
|
22.0
|
1.0
|
H
|
A:THR244
|
4.6
|
19.5
|
1.0
|
H
|
A:ASN245
|
4.6
|
22.0
|
1.0
|
N
|
A:VAL29
|
4.6
|
20.8
|
1.0
|
H
|
A:CYS31
|
4.6
|
23.2
|
1.0
|
NE
|
A:ARG104
|
4.7
|
22.3
|
1.0
|
HB
|
A:THR244
|
4.8
|
20.7
|
1.0
|
SG
|
A:CYS24
|
4.8
|
23.1
|
1.0
|
SG
|
A:CYS31
|
4.8
|
23.3
|
1.0
|
HA
|
A:CYS27
|
4.8
|
21.3
|
1.0
|
CZ
|
A:ARG104
|
4.8
|
25.3
|
1.0
|
CA
|
A:VAL29
|
4.9
|
21.1
|
1.0
|
HB3
|
A:CYS24
|
4.9
|
23.8
|
1.0
|
N
|
A:GLY30
|
4.9
|
19.9
|
1.0
|
HA
|
A:GLN243
|
5.0
|
20.2
|
1.0
|
HB2
|
A:ASN245
|
5.0
|
21.3
|
1.0
|
|
Iron binding site 4 out
of 20 in 8r3a
Go back to
Iron Binding Sites List in 8r3a
Iron binding site 4 out
of 20 in the Nt-26 Arsenite Oxidase B F108C-G123C
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Nt-26 Arsenite Oxidase B F108C-G123C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe201
b:37.5
occ:1.00
|
FE1
|
B:FES201
|
0.0
|
37.5
|
1.0
|
ND1
|
B:HIS105
|
2.1
|
25.0
|
1.0
|
ND1
|
B:HIS124
|
2.2
|
33.6
|
1.0
|
S1
|
B:FES201
|
2.3
|
35.7
|
1.0
|
S2
|
B:FES201
|
2.4
|
38.4
|
1.0
|
HB3
|
B:HIS105
|
2.8
|
28.3
|
1.0
|
HB2
|
B:HIS124
|
2.8
|
32.8
|
1.0
|
FE2
|
B:FES201
|
2.8
|
36.9
|
1.0
|
CE1
|
B:HIS105
|
3.1
|
30.4
|
1.0
|
CG
|
B:HIS105
|
3.1
|
29.1
|
1.0
|
CG
|
B:HIS124
|
3.2
|
35.1
|
1.0
|
CE1
|
B:HIS124
|
3.2
|
38.5
|
1.0
|
HE1
|
B:HIS105
|
3.3
|
27.7
|
1.0
|
HE1
|
B:HIS124
|
3.4
|
36.6
|
1.0
|
CB
|
B:HIS105
|
3.4
|
27.6
|
1.0
|
CB
|
B:HIS124
|
3.4
|
31.8
|
1.0
|
HB2
|
B:LYS106
|
3.4
|
39.0
|
1.0
|
H
|
B:HIS124
|
3.6
|
36.0
|
0.7
|
H
|
B:HIS124
|
3.6
|
35.5
|
0.3
|
H
|
B:LYS106
|
3.6
|
31.7
|
1.0
|
HB3
|
B:CYS123
|
3.6
|
33.9
|
0.3
|
HB2
|
B:HIS105
|
3.8
|
28.3
|
1.0
|
HB2
|
B:GLN140
|
3.8
|
25.3
|
1.0
|
HB2
|
B:CYS123
|
3.9
|
38.8
|
0.7
|
HG2
|
B:LYS106
|
3.9
|
40.1
|
1.0
|
N
|
B:HIS124
|
4.0
|
36.7
|
1.0
|
N
|
B:LYS106
|
4.2
|
30.6
|
1.0
|
HB3
|
B:HIS124
|
4.2
|
32.7
|
1.0
|
CA
|
B:HIS124
|
4.2
|
32.7
|
1.0
|
NE2
|
B:HIS105
|
4.2
|
24.6
|
1.0
|
CD2
|
B:HIS105
|
4.2
|
30.5
|
1.0
|
CB
|
B:LYS106
|
4.3
|
39.7
|
1.0
|
NE2
|
B:HIS124
|
4.3
|
35.9
|
1.0
|
HB3
|
B:CYS123
|
4.3
|
38.7
|
0.7
|
CD2
|
B:HIS124
|
4.3
|
30.5
|
1.0
|
CG
|
B:LYS106
|
4.5
|
41.7
|
1.0
|
HG3
|
B:LYS106
|
4.5
|
40.1
|
1.0
|
CB
|
B:CYS123
|
4.5
|
33.5
|
0.3
|
SG
|
B:CYS103
|
4.5
|
31.8
|
1.0
|
CB
|
B:CYS123
|
4.6
|
36.7
|
0.7
|
SG
|
B:CYS121
|
4.6
|
37.5
|
1.0
|
CA
|
B:HIS105
|
4.6
|
29.2
|
1.0
|
HB3
|
B:GLN140
|
4.7
|
25.3
|
1.0
|
CB
|
B:GLN140
|
4.7
|
26.6
|
1.0
|
SG
|
B:CYS123
|
4.8
|
34.8
|
0.3
|
C
|
B:HIS105
|
4.8
|
31.3
|
1.0
|
C
|
B:CYS123
|
4.8
|
36.1
|
0.3
|
C
|
B:CYS123
|
4.8
|
37.9
|
0.7
|
CA
|
B:LYS106
|
4.9
|
35.1
|
1.0
|
C
|
B:HIS124
|
4.9
|
30.1
|
1.0
|
OG
|
B:SER126
|
5.0
|
29.0
|
1.0
|
|
Iron binding site 5 out
of 20 in 8r3a
Go back to
Iron Binding Sites List in 8r3a
Iron binding site 5 out
of 20 in the Nt-26 Arsenite Oxidase B F108C-G123C
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Nt-26 Arsenite Oxidase B F108C-G123C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe201
b:36.9
occ:1.00
|
FE2
|
B:FES201
|
0.0
|
36.9
|
1.0
|
S2
|
B:FES201
|
2.3
|
38.4
|
1.0
|
S1
|
B:FES201
|
2.3
|
35.7
|
1.0
|
SG
|
B:CYS103
|
2.3
|
31.8
|
1.0
|
SG
|
B:CYS121
|
2.3
|
37.5
|
1.0
|
FE1
|
B:FES201
|
2.8
|
37.5
|
1.0
|
HB3
|
B:CYS103
|
3.1
|
33.4
|
1.0
|
CB
|
B:CYS103
|
3.1
|
35.1
|
1.0
|
HB2
|
B:CYS103
|
3.2
|
33.4
|
1.0
|
HB3
|
B:HIS105
|
3.2
|
28.3
|
1.0
|
CB
|
B:CYS121
|
3.2
|
37.0
|
1.0
|
HB2
|
B:CYS121
|
3.3
|
34.5
|
1.0
|
HB3
|
B:CYS121
|
3.3
|
34.5
|
1.0
|
HB3
|
B:CYS108
|
3.6
|
40.7
|
0.3
|
HB3
|
B:CYS123
|
3.7
|
33.9
|
0.3
|
HB2
|
B:CYS108
|
3.7
|
39.3
|
0.7
|
H
|
B:HIS124
|
3.7
|
36.0
|
0.7
|
H
|
B:HIS124
|
3.7
|
35.5
|
0.3
|
HB2
|
B:CYS123
|
3.7
|
38.8
|
0.7
|
H
|
B:LYS106
|
3.8
|
31.7
|
1.0
|
HB2
|
B:SER126
|
3.8
|
31.4
|
1.0
|
CB
|
B:HIS105
|
4.1
|
27.6
|
1.0
|
H
|
B:CYS108
|
4.2
|
39.0
|
0.3
|
H
|
B:CYS108
|
4.2
|
38.6
|
0.7
|
H
|
B:HIS105
|
4.2
|
28.1
|
1.0
|
HB2
|
B:HIS105
|
4.3
|
28.3
|
1.0
|
HD23
|
B:LEU110
|
4.5
|
29.6
|
1.0
|
OG
|
B:SER126
|
4.5
|
29.0
|
1.0
|
ND1
|
B:HIS105
|
4.5
|
25.0
|
1.0
|
H
|
B:CYS123
|
4.5
|
33.1
|
0.7
|
H
|
B:CYS123
|
4.5
|
32.9
|
0.3
|
N
|
B:HIS124
|
4.5
|
36.7
|
1.0
|
H
|
B:SER126
|
4.5
|
28.7
|
1.0
|
CA
|
B:CYS103
|
4.6
|
30.8
|
1.0
|
CB
|
B:CYS108
|
4.6
|
39.7
|
0.3
|
CB
|
B:SER126
|
4.6
|
33.4
|
1.0
|
CB
|
B:CYS108
|
4.6
|
36.8
|
0.7
|
HB2
|
B:HIS124
|
4.6
|
32.8
|
1.0
|
CB
|
B:CYS123
|
4.6
|
33.5
|
0.3
|
CA
|
B:CYS121
|
4.6
|
27.8
|
1.0
|
ND1
|
B:HIS124
|
4.6
|
33.6
|
1.0
|
H
|
B:GLY107
|
4.7
|
32.8
|
1.0
|
HD21
|
B:LEU110
|
4.7
|
29.6
|
1.0
|
CB
|
B:CYS123
|
4.7
|
36.7
|
0.7
|
N
|
B:LYS106
|
4.7
|
30.6
|
1.0
|
HB2
|
B:LYS106
|
4.7
|
39.0
|
1.0
|
HB2
|
B:CYS123
|
4.8
|
33.9
|
0.3
|
HA
|
B:CYS121
|
4.8
|
31.1
|
1.0
|
CG
|
B:HIS105
|
4.8
|
29.1
|
1.0
|
HA
|
B:CYS103
|
4.8
|
32.7
|
1.0
|
HB2
|
B:CYS108
|
4.9
|
40.7
|
0.3
|
N
|
B:CYS108
|
4.9
|
38.9
|
0.7
|
N
|
B:CYS108
|
4.9
|
39.1
|
0.3
|
N
|
B:HIS105
|
5.0
|
27.4
|
1.0
|
HE1
|
B:PHE128
|
5.0
|
29.7
|
1.0
|
|
Iron binding site 6 out
of 20 in 8r3a
Go back to
Iron Binding Sites List in 8r3a
Iron binding site 6 out
of 20 in the Nt-26 Arsenite Oxidase B F108C-G123C
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Nt-26 Arsenite Oxidase B F108C-G123C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe902
b:23.9
occ:1.00
|
FE1
|
C:F3S902
|
0.0
|
23.9
|
1.0
|
S2
|
C:F3S902
|
2.2
|
26.7
|
1.0
|
S3
|
C:F3S902
|
2.3
|
24.0
|
1.0
|
SG
|
C:CYS24
|
2.3
|
24.7
|
1.0
|
S1
|
C:F3S902
|
2.4
|
26.6
|
1.0
|
FE3
|
C:F3S902
|
2.7
|
26.0
|
1.0
|
FE4
|
C:F3S902
|
2.7
|
26.2
|
1.0
|
CB
|
C:CYS24
|
3.2
|
27.7
|
1.0
|
HB2
|
C:CYS24
|
3.2
|
26.2
|
1.0
|
HB3
|
C:CYS24
|
3.3
|
26.2
|
1.0
|
HA3
|
C:GLY105
|
3.4
|
20.7
|
1.0
|
HB2
|
C:PHE26
|
3.5
|
22.8
|
1.0
|
H
|
C:CYS27
|
3.5
|
23.6
|
1.0
|
H
|
C:GLY105
|
3.6
|
22.1
|
1.0
|
OG
|
C:SER102
|
3.8
|
27.0
|
1.0
|
S4
|
C:F3S902
|
3.9
|
27.7
|
1.0
|
CA
|
C:GLY105
|
4.0
|
19.6
|
1.0
|
HA2
|
C:GLY105
|
4.0
|
20.7
|
1.0
|
N
|
C:GLY105
|
4.0
|
23.4
|
1.0
|
HB2
|
C:CYS31
|
4.1
|
24.4
|
1.0
|
HD2
|
C:PHE26
|
4.1
|
25.8
|
1.0
|
H
|
C:PHE26
|
4.1
|
21.4
|
1.0
|
HB2
|
C:ARG104
|
4.3
|
23.3
|
1.0
|
N
|
C:CYS27
|
4.3
|
24.2
|
1.0
|
HE1
|
C:TYR33
|
4.3
|
20.7
|
1.0
|
H
|
C:CYS31
|
4.4
|
23.2
|
1.0
|
CB
|
C:PHE26
|
4.4
|
21.9
|
1.0
|
H
|
C:SER102
|
4.5
|
25.6
|
1.0
|
HH21
|
C:ARG104
|
4.6
|
32.0
|
1.0
|
CA
|
C:CYS24
|
4.6
|
24.3
|
1.0
|
HB3
|
C:SER102
|
4.7
|
27.2
|
1.0
|
SG
|
C:CYS31
|
4.7
|
25.7
|
1.0
|
HE
|
C:ARG104
|
4.7
|
31.2
|
1.0
|
OH
|
C:TYR33
|
4.8
|
22.5
|
1.0
|
SG
|
C:CYS27
|
4.8
|
25.4
|
1.0
|
CB
|
C:CYS31
|
4.8
|
24.1
|
1.0
|
HB3
|
C:PHE26
|
4.8
|
22.7
|
1.0
|
HA
|
C:CYS24
|
4.9
|
24.5
|
1.0
|
CB
|
C:SER102
|
4.9
|
27.5
|
1.0
|
H
|
C:GLY30
|
4.9
|
25.0
|
1.0
|
HB3
|
C:CYS27
|
4.9
|
24.8
|
1.0
|
N
|
C:PHE26
|
4.9
|
20.5
|
1.0
|
CD2
|
C:PHE26
|
4.9
|
25.9
|
1.0
|
CA
|
C:PHE26
|
5.0
|
23.0
|
1.0
|
|
Iron binding site 7 out
of 20 in 8r3a
Go back to
Iron Binding Sites List in 8r3a
Iron binding site 7 out
of 20 in the Nt-26 Arsenite Oxidase B F108C-G123C
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Nt-26 Arsenite Oxidase B F108C-G123C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe902
b:26.0
occ:1.00
|
FE3
|
C:F3S902
|
0.0
|
26.0
|
1.0
|
S4
|
C:F3S902
|
2.3
|
27.7
|
1.0
|
S3
|
C:F3S902
|
2.3
|
24.0
|
1.0
|
S1
|
C:F3S902
|
2.3
|
26.6
|
1.0
|
SG
|
C:CYS31
|
2.4
|
25.7
|
1.0
|
FE4
|
C:F3S902
|
2.7
|
26.2
|
1.0
|
FE1
|
C:F3S902
|
2.7
|
23.9
|
1.0
|
HD22
|
C:ASN245
|
3.0
|
26.3
|
1.0
|
HB2
|
C:CYS31
|
3.1
|
24.4
|
1.0
|
H
|
C:CYS31
|
3.3
|
23.2
|
1.0
|
CB
|
C:CYS31
|
3.3
|
24.1
|
1.0
|
HB
|
C:VAL29
|
3.5
|
25.4
|
1.0
|
HB2
|
C:ASN245
|
3.5
|
26.8
|
1.0
|
ND2
|
C:ASN245
|
3.6
|
26.1
|
1.0
|
S2
|
C:F3S902
|
3.9
|
26.7
|
1.0
|
H
|
C:SER102
|
3.9
|
25.6
|
1.0
|
HB3
|
C:SER102
|
3.9
|
27.2
|
1.0
|
HB3
|
C:CYS31
|
4.0
|
24.5
|
1.0
|
HD21
|
C:ASN245
|
4.0
|
26.3
|
1.0
|
N
|
C:CYS31
|
4.1
|
23.2
|
1.0
|
HG12
|
C:VAL29
|
4.1
|
25.8
|
1.0
|
HB2
|
C:CYS24
|
4.2
|
26.2
|
1.0
|
H
|
C:ASN245
|
4.3
|
28.5
|
1.0
|
CG
|
C:ASN245
|
4.3
|
26.8
|
1.0
|
CB
|
C:ASN245
|
4.3
|
25.6
|
1.0
|
CA
|
C:CYS31
|
4.3
|
24.2
|
1.0
|
HG13
|
C:VAL29
|
4.3
|
25.8
|
1.0
|
CB
|
C:VAL29
|
4.4
|
26.4
|
1.0
|
OG
|
C:SER102
|
4.4
|
27.0
|
1.0
|
H
|
C:GLY30
|
4.4
|
25.0
|
1.0
|
HE1
|
C:TYR33
|
4.5
|
20.7
|
1.0
|
CG1
|
C:VAL29
|
4.5
|
25.5
|
1.0
|
HB3
|
C:CYS24
|
4.5
|
26.2
|
1.0
|
CB
|
C:SER102
|
4.6
|
27.5
|
1.0
|
SG
|
C:CYS24
|
4.6
|
24.7
|
1.0
|
SG
|
C:CYS27
|
4.7
|
25.4
|
1.0
|
CB
|
C:CYS24
|
4.7
|
27.7
|
1.0
|
N
|
C:SER102
|
4.7
|
25.0
|
1.0
|
HH21
|
C:ARG104
|
4.8
|
32.0
|
1.0
|
HA
|
C:CYS31
|
4.8
|
24.7
|
1.0
|
N
|
C:GLY30
|
4.8
|
26.9
|
1.0
|
HB3
|
C:ASN245
|
4.8
|
26.8
|
1.0
|
HB3
|
C:ASN97
|
4.9
|
25.7
|
1.0
|
HA2
|
C:GLY101
|
4.9
|
27.5
|
1.0
|
HG21
|
C:VAL29
|
4.9
|
24.7
|
1.0
|
HB
|
C:THR244
|
4.9
|
26.2
|
1.0
|
|
Iron binding site 8 out
of 20 in 8r3a
Go back to
Iron Binding Sites List in 8r3a
Iron binding site 8 out
of 20 in the Nt-26 Arsenite Oxidase B F108C-G123C
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Nt-26 Arsenite Oxidase B F108C-G123C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe902
b:26.2
occ:1.00
|
FE4
|
C:F3S902
|
0.0
|
26.2
|
1.0
|
S3
|
C:F3S902
|
2.2
|
24.0
|
1.0
|
SG
|
C:CYS27
|
2.2
|
25.4
|
1.0
|
S2
|
C:F3S902
|
2.3
|
26.7
|
1.0
|
S4
|
C:F3S902
|
2.3
|
27.7
|
1.0
|
FE3
|
C:F3S902
|
2.7
|
26.0
|
1.0
|
FE1
|
C:F3S902
|
2.7
|
23.9
|
1.0
|
HH21
|
C:ARG104
|
3.2
|
32.0
|
1.0
|
H
|
C:CYS27
|
3.2
|
23.6
|
1.0
|
HB
|
C:VAL29
|
3.2
|
25.4
|
1.0
|
HB3
|
C:CYS27
|
3.2
|
24.8
|
1.0
|
CB
|
C:CYS27
|
3.3
|
24.9
|
1.0
|
N
|
C:CYS27
|
3.8
|
24.2
|
1.0
|
CA
|
C:CYS27
|
3.9
|
24.3
|
1.0
|
H
|
C:VAL29
|
3.9
|
22.7
|
1.0
|
NH2
|
C:ARG104
|
4.0
|
31.6
|
1.0
|
S1
|
C:F3S902
|
4.0
|
26.6
|
1.0
|
H
|
C:GLY30
|
4.0
|
25.0
|
1.0
|
HE
|
C:ARG104
|
4.1
|
31.2
|
1.0
|
HB2
|
C:CYS27
|
4.1
|
24.9
|
1.0
|
HG22
|
C:VAL29
|
4.1
|
24.6
|
1.0
|
CB
|
C:VAL29
|
4.2
|
26.4
|
1.0
|
C
|
C:CYS27
|
4.2
|
20.9
|
1.0
|
O
|
C:CYS27
|
4.3
|
22.1
|
1.0
|
HG21
|
C:VAL29
|
4.4
|
24.7
|
1.0
|
HH22
|
C:ARG104
|
4.5
|
31.9
|
1.0
|
CG2
|
C:VAL29
|
4.5
|
24.0
|
1.0
|
OG
|
C:SER102
|
4.5
|
27.0
|
1.0
|
HB2
|
C:PHE26
|
4.5
|
22.8
|
1.0
|
HB3
|
C:SER102
|
4.5
|
27.2
|
1.0
|
H
|
C:CYS31
|
4.6
|
23.2
|
1.0
|
N
|
C:VAL29
|
4.6
|
22.2
|
1.0
|
H
|
C:ASN245
|
4.6
|
28.5
|
1.0
|
H
|
C:THR244
|
4.7
|
26.4
|
1.0
|
SG
|
C:CYS24
|
4.7
|
24.7
|
1.0
|
SG
|
C:CYS31
|
4.8
|
25.7
|
1.0
|
HB
|
C:THR244
|
4.8
|
26.2
|
1.0
|
HA
|
C:CYS27
|
4.8
|
23.7
|
1.0
|
NE
|
C:ARG104
|
4.8
|
29.9
|
1.0
|
N
|
C:GLY30
|
4.8
|
26.9
|
1.0
|
HB3
|
C:CYS24
|
4.8
|
26.2
|
1.0
|
CA
|
C:VAL29
|
4.9
|
24.2
|
1.0
|
CZ
|
C:ARG104
|
4.9
|
33.0
|
1.0
|
C
|
C:PHE26
|
5.0
|
21.8
|
1.0
|
|
Iron binding site 9 out
of 20 in 8r3a
Go back to
Iron Binding Sites List in 8r3a
Iron binding site 9 out
of 20 in the Nt-26 Arsenite Oxidase B F108C-G123C
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Nt-26 Arsenite Oxidase B F108C-G123C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe201
b:39.9
occ:1.00
|
FE1
|
D:FES201
|
0.0
|
39.9
|
1.0
|
ND1
|
D:HIS124
|
2.1
|
31.9
|
1.0
|
S1
|
D:FES201
|
2.3
|
39.5
|
1.0
|
ND1
|
D:HIS105
|
2.3
|
33.3
|
1.0
|
S2
|
D:FES201
|
2.3
|
39.3
|
1.0
|
HB2
|
D:HIS124
|
2.7
|
33.9
|
1.0
|
FE2
|
D:FES201
|
2.8
|
37.8
|
1.0
|
HB3
|
D:HIS105
|
2.8
|
28.2
|
1.0
|
CG
|
D:HIS124
|
3.0
|
34.6
|
1.0
|
CE1
|
D:HIS124
|
3.1
|
34.6
|
1.0
|
CG
|
D:HIS105
|
3.2
|
29.2
|
1.0
|
CE1
|
D:HIS105
|
3.3
|
32.0
|
1.0
|
HE1
|
D:HIS124
|
3.3
|
34.5
|
1.0
|
CB
|
D:HIS124
|
3.3
|
34.1
|
1.0
|
HE1
|
D:HIS105
|
3.4
|
33.1
|
1.0
|
CB
|
D:HIS105
|
3.4
|
27.0
|
1.0
|
HB3
|
D:CYS123
|
3.4
|
38.4
|
0.3
|
HB2
|
D:LYS106
|
3.5
|
35.0
|
1.0
|
H
|
D:HIS124
|
3.5
|
34.5
|
0.3
|
H
|
D:HIS124
|
3.5
|
34.8
|
0.7
|
H
|
D:LYS106
|
3.6
|
31.5
|
1.0
|
HB2
|
D:CYS123
|
3.7
|
36.5
|
0.7
|
HB2
|
D:HIS105
|
3.9
|
28.1
|
1.0
|
HB2
|
D:GLN140
|
3.9
|
31.0
|
1.0
|
N
|
D:HIS124
|
3.9
|
34.1
|
1.0
|
HG2
|
D:LYS106
|
4.0
|
35.8
|
1.0
|
HB3
|
D:HIS124
|
4.1
|
33.8
|
1.0
|
N
|
D:LYS106
|
4.1
|
30.3
|
1.0
|
CA
|
D:HIS124
|
4.2
|
32.5
|
1.0
|
NE2
|
D:HIS124
|
4.2
|
36.8
|
1.0
|
CD2
|
D:HIS124
|
4.2
|
31.5
|
1.0
|
HB3
|
D:CYS123
|
4.3
|
36.5
|
0.7
|
CB
|
D:LYS106
|
4.3
|
35.1
|
1.0
|
NE2
|
D:HIS105
|
4.4
|
35.5
|
1.0
|
CD2
|
D:HIS105
|
4.4
|
35.0
|
1.0
|
CB
|
D:CYS123
|
4.4
|
37.7
|
0.3
|
CB
|
D:CYS123
|
4.4
|
35.7
|
0.7
|
CG
|
D:LYS106
|
4.5
|
35.6
|
1.0
|
HG3
|
D:LYS106
|
4.5
|
35.8
|
1.0
|
SG
|
D:CYS121
|
4.5
|
39.8
|
1.0
|
SG
|
D:CYS103
|
4.5
|
31.1
|
1.0
|
CA
|
D:HIS105
|
4.7
|
29.9
|
1.0
|
C
|
D:CYS123
|
4.7
|
39.1
|
0.7
|
C
|
D:CYS123
|
4.8
|
37.9
|
0.3
|
CB
|
D:GLN140
|
4.8
|
30.7
|
1.0
|
C
|
D:HIS105
|
4.8
|
32.0
|
1.0
|
CA
|
D:LYS106
|
4.8
|
34.3
|
1.0
|
HB3
|
D:GLN140
|
4.8
|
30.9
|
1.0
|
C
|
D:HIS124
|
4.9
|
29.5
|
1.0
|
HB2
|
D:CYS123
|
4.9
|
38.5
|
0.3
|
HG3
|
D:GLN140
|
5.0
|
36.1
|
1.0
|
HA
|
D:HIS124
|
5.0
|
32.6
|
1.0
|
SG
|
D:CYS123
|
5.0
|
43.3
|
0.3
|
|
Iron binding site 10 out
of 20 in 8r3a
Go back to
Iron Binding Sites List in 8r3a
Iron binding site 10 out
of 20 in the Nt-26 Arsenite Oxidase B F108C-G123C
 Mono view
 Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Nt-26 Arsenite Oxidase B F108C-G123C within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe201
b:37.8
occ:1.00
|
FE2
|
D:FES201
|
0.0
|
37.8
|
1.0
|
S1
|
D:FES201
|
2.2
|
39.5
|
1.0
|
S2
|
D:FES201
|
2.2
|
39.3
|
1.0
|
SG
|
D:CYS121
|
2.3
|
39.8
|
1.0
|
SG
|
D:CYS103
|
2.3
|
31.1
|
1.0
|
FE1
|
D:FES201
|
2.8
|
39.9
|
1.0
|
HB3
|
D:CYS103
|
3.1
|
34.6
|
1.0
|
CB
|
D:CYS103
|
3.1
|
36.7
|
1.0
|
HB2
|
D:CYS103
|
3.2
|
34.7
|
1.0
|
HB3
|
D:HIS105
|
3.2
|
28.2
|
1.0
|
CB
|
D:CYS121
|
3.2
|
35.2
|
1.0
|
HB3
|
D:CYS121
|
3.2
|
35.2
|
1.0
|
HB2
|
D:CYS121
|
3.3
|
35.2
|
1.0
|
HB3
|
D:CYS108
|
3.6
|
45.2
|
0.3
|
HB2
|
D:CYS123
|
3.7
|
36.5
|
0.7
|
H
|
D:HIS124
|
3.7
|
34.5
|
0.3
|
H
|
D:HIS124
|
3.7
|
34.8
|
0.7
|
HB2
|
D:CYS108
|
3.7
|
36.6
|
0.7
|
H
|
D:LYS106
|
3.8
|
31.5
|
1.0
|
HB3
|
D:CYS123
|
3.8
|
38.4
|
0.3
|
HB2
|
D:SER126
|
3.8
|
29.2
|
1.0
|
CB
|
D:HIS105
|
4.1
|
27.0
|
1.0
|
H
|
D:CYS108
|
4.3
|
36.6
|
0.7
|
HB2
|
D:HIS105
|
4.3
|
28.1
|
1.0
|
H
|
D:CYS108
|
4.3
|
39.7
|
0.3
|
H
|
D:HIS105
|
4.3
|
26.8
|
1.0
|
OG
|
D:SER126
|
4.4
|
33.1
|
1.0
|
H
|
D:SER126
|
4.4
|
29.7
|
1.0
|
HB2
|
D:HIS124
|
4.5
|
33.9
|
1.0
|
H
|
D:CYS123
|
4.5
|
34.5
|
0.7
|
H
|
D:CYS123
|
4.5
|
36.5
|
0.3
|
HD23
|
D:LEU110
|
4.5
|
31.0
|
1.0
|
N
|
D:HIS124
|
4.5
|
34.1
|
1.0
|
ND1
|
D:HIS124
|
4.5
|
31.9
|
1.0
|
ND1
|
D:HIS105
|
4.6
|
33.3
|
1.0
|
CB
|
D:CYS108
|
4.6
|
44.9
|
0.3
|
CB
|
D:SER126
|
4.6
|
28.1
|
1.0
|
CA
|
D:CYS103
|
4.6
|
33.1
|
1.0
|
CA
|
D:CYS121
|
4.6
|
31.9
|
1.0
|
CB
|
D:CYS123
|
4.6
|
35.7
|
0.7
|
CB
|
D:CYS108
|
4.6
|
37.1
|
0.7
|
N
|
D:LYS106
|
4.7
|
30.3
|
1.0
|
CB
|
D:CYS123
|
4.7
|
37.7
|
0.3
|
H
|
D:GLY107
|
4.7
|
33.6
|
1.0
|
HD21
|
D:LEU110
|
4.7
|
31.0
|
1.0
|
HB2
|
D:CYS123
|
4.8
|
38.5
|
0.3
|
HB2
|
D:LYS106
|
4.8
|
35.0
|
1.0
|
HB2
|
D:CYS108
|
4.8
|
45.2
|
0.3
|
HA
|
D:CYS121
|
4.8
|
34.5
|
1.0
|
CG
|
D:HIS105
|
4.9
|
29.2
|
1.0
|
HA
|
D:CYS103
|
4.9
|
32.6
|
1.0
|
HE1
|
D:PHE128
|
5.0
|
30.8
|
1.0
|
N
|
D:HIS105
|
5.0
|
26.3
|
1.0
|
|
Reference:
F.Engrola,
T.Santos-Silva.
Nt-26 Arsenite Oxidase B F108C-G123C To Be Published.
Page generated: Thu Aug 7 21:35:31 2025
|