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Iron in PDB 1fop: Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with L- Arg and No(H4B-Bound)

Enzymatic activity of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with L- Arg and No(H4B-Bound)

All present enzymatic activity of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with L- Arg and No(H4B-Bound):
1.14.13.39;

Protein crystallography data

The structure of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with L- Arg and No(H4B-Bound), PDB code: 1fop was solved by C.S.Raman, H.Li, P.Martasek, B.S.S.Masters, T.L.Poulos, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.19 / 2.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 58.549, 106.247, 156.743, 90.00, 90.00, 90.00
R / Rfree (%) 22 / 27.7

Other elements in 1fop:

The structure of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with L- Arg and No(H4B-Bound) also contains other interesting chemical elements:

Arsenic (As) 2 atoms
Zinc (Zn) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with L- Arg and No(H4B-Bound) (pdb code 1fop). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with L- Arg and No(H4B-Bound), PDB code: 1fop:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 1fop

Go back to Iron Binding Sites List in 1fop
Iron binding site 1 out of 2 in the Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with L- Arg and No(H4B-Bound)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with L- Arg and No(H4B-Bound) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe500

b:32.7
occ:1.00
FE A:HEM500 0.0 32.7 1.0
N A:NO1910 1.8 34.6 1.0
NA A:HEM500 1.9 32.8 1.0
NC A:HEM500 2.0 32.3 1.0
ND A:HEM500 2.0 33.6 1.0
NB A:HEM500 2.0 31.6 1.0
SG A:CYS186 2.3 34.3 1.0
O A:NO1910 2.9 39.0 1.0
C1A A:HEM500 3.0 34.0 1.0
C4C A:HEM500 3.0 33.6 1.0
C4A A:HEM500 3.0 33.4 1.0
C1C A:HEM500 3.0 33.1 1.0
C4D A:HEM500 3.0 33.9 1.0
C1D A:HEM500 3.0 32.2 1.0
C1B A:HEM500 3.1 30.8 1.0
C4B A:HEM500 3.1 31.1 1.0
CB A:CYS186 3.3 31.9 1.0
CHD A:HEM500 3.4 33.8 1.0
CHA A:HEM500 3.4 32.8 1.0
CHB A:HEM500 3.4 31.6 1.0
CHC A:HEM500 3.5 31.9 1.0
CA A:CYS186 4.1 31.3 1.0
C2A A:HEM500 4.2 34.6 1.0
C3C A:HEM500 4.2 34.4 1.0
C2C A:HEM500 4.3 34.0 1.0
C3D A:HEM500 4.3 35.1 1.0
C3A A:HEM500 4.3 33.7 1.0
C2D A:HEM500 4.3 34.6 1.0
NH1 A:ARG1700 4.3 38.3 1.0
C2B A:HEM500 4.3 31.3 1.0
C3B A:HEM500 4.4 31.4 1.0
NE1 A:TRP180 4.4 35.9 1.0
CZ A:ARG1700 4.7 39.7 1.0
C A:CYS186 4.9 31.6 1.0
N A:GLY188 5.0 32.7 1.0

Iron binding site 2 out of 2 in 1fop

Go back to Iron Binding Sites List in 1fop
Iron binding site 2 out of 2 in the Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with L- Arg and No(H4B-Bound)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Bovine Endothelial Nitric Oxide Synthase Heme Domain Complexed with L- Arg and No(H4B-Bound) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe500

b:36.2
occ:1.00
FE B:HEM500 0.0 36.2 1.0
N B:NO2910 1.8 34.6 1.0
ND B:HEM500 1.9 33.4 1.0
NC B:HEM500 2.0 33.5 1.0
NB B:HEM500 2.0 33.1 1.0
NA B:HEM500 2.0 33.0 1.0
SG B:CYS186 2.3 32.9 1.0
O B:NO2910 2.9 36.8 1.0
C1D B:HEM500 3.0 34.4 1.0
C1C B:HEM500 3.0 34.5 1.0
C4C B:HEM500 3.0 33.6 1.0
C4D B:HEM500 3.0 34.6 1.0
C4B B:HEM500 3.1 33.6 1.0
C1B B:HEM500 3.1 32.5 1.0
C1A B:HEM500 3.1 33.4 1.0
C4A B:HEM500 3.1 33.5 1.0
CHD B:HEM500 3.4 34.4 1.0
CHC B:HEM500 3.4 34.6 1.0
CHA B:HEM500 3.5 32.7 1.0
CHB B:HEM500 3.5 32.4 1.0
CB B:CYS186 3.5 32.3 1.0
CA B:CYS186 4.1 33.1 1.0
C2D B:HEM500 4.2 34.8 1.0
C2C B:HEM500 4.2 33.9 1.0
C3C B:HEM500 4.3 34.0 1.0
C3D B:HEM500 4.3 34.5 1.0
C2B B:HEM500 4.3 31.9 1.0
C3B B:HEM500 4.3 32.3 1.0
C2A B:HEM500 4.3 32.8 1.0
C3A B:HEM500 4.3 33.1 1.0
NE1 B:TRP180 4.3 36.2 1.0
NH1 B:ARG2700 4.5 37.6 1.0
CZ B:ARG2700 4.6 36.1 1.0
NH2 B:ARG2700 4.9 37.1 1.0
C B:CYS186 4.9 33.5 1.0
N B:GLY188 4.9 33.2 1.0
NE B:ARG2700 4.9 35.0 1.0
N B:VAL187 5.0 32.5 1.0
CD1 B:TRP180 5.0 36.1 1.0

Reference:

H.Li, C.S.Raman, P.Martasek, B.S.Masters, T.L.Poulos. Crystallographic Studies on Endothelial Nitric Oxide Synthase Complexed with Nitric Oxide and Mechanism-Based Inhibitors. Biochemistry V. 40 5399 2001.
ISSN: ISSN 0006-2960
PubMed: 11331003
DOI: 10.1021/BI002658V
Page generated: Sat Aug 3 05:11:20 2024

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