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Iron in PDB 1io3: Crystal Structure of Ferricytochrome C2 From Rhodopseudomonas Viridis

Protein crystallography data

The structure of Crystal Structure of Ferricytochrome C2 From Rhodopseudomonas Viridis, PDB code: 1io3 was solved by K.Miki, S.Sogabe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.90
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 75.970, 75.970, 40.370, 90.00, 90.00, 120.00
R / Rfree (%) 20.8 / 24.3

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Ferricytochrome C2 From Rhodopseudomonas Viridis (pdb code 1io3). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Ferricytochrome C2 From Rhodopseudomonas Viridis, PDB code: 1io3:

Iron binding site 1 out of 1 in 1io3

Go back to Iron Binding Sites List in 1io3
Iron binding site 1 out of 1 in the Crystal Structure of Ferricytochrome C2 From Rhodopseudomonas Viridis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Ferricytochrome C2 From Rhodopseudomonas Viridis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe108

b:14.3
occ:1.00
FE A:HEC108 0.0 14.3 1.0
NE2 A:HIS17 1.9 9.9 1.0
NA A:HEC108 2.0 15.1 1.0
NB A:HEC108 2.0 14.5 1.0
NC A:HEC108 2.0 15.7 1.0
ND A:HEC108 2.0 15.7 1.0
SD A:MET79 2.1 19.5 1.0
CE1 A:HIS17 2.9 11.4 1.0
CD2 A:HIS17 2.9 12.2 1.0
C4A A:HEC108 3.0 15.9 1.0
C1A A:HEC108 3.0 13.7 1.0
C1B A:HEC108 3.0 14.6 1.0
C4C A:HEC108 3.0 16.0 1.0
C4B A:HEC108 3.1 15.9 1.0
C4D A:HEC108 3.1 12.2 1.0
C1D A:HEC108 3.1 14.1 1.0
C1C A:HEC108 3.1 15.3 1.0
CHB A:HEC108 3.4 13.8 1.0
CHA A:HEC108 3.4 13.2 1.0
CE A:MET79 3.4 17.4 1.0
CHD A:HEC108 3.4 12.8 1.0
CHC A:HEC108 3.4 14.7 1.0
CG A:MET79 3.5 19.6 1.0
ND1 A:HIS17 4.0 9.6 1.0
CG A:HIS17 4.1 9.5 1.0
C3A A:HEC108 4.2 14.1 1.0
C2A A:HEC108 4.3 12.9 1.0
C3C A:HEC108 4.3 14.5 1.0
C2B A:HEC108 4.3 14.9 1.0
C3B A:HEC108 4.3 15.1 1.0
C2D A:HEC108 4.3 13.7 1.0
C2C A:HEC108 4.3 14.2 1.0
C3D A:HEC108 4.3 12.5 1.0
CB A:MET79 4.3 23.0 1.0
OH A:TYR66 4.7 18.7 1.0

Reference:

S.Sogabe, K.Miki. Crystal Structure of the Oxidized Cytochrome C(2) From Blastochloris Viridis. Febs Lett. V. 491 174 2001.
ISSN: ISSN 0014-5793
PubMed: 11240122
DOI: 10.1016/S0014-5793(01)02179-2
Page generated: Sat Aug 3 08:05:35 2024

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