Iron binding site 1 out of 8 in 1ksu
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Iron in the PDB 1ksu. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: His18, A: Ala74, A: His75, A: Hem801, A: Hoh3164, |
conact list:
Atom | Atom | Distance (A) | Fe | NE2 A:His18 | 2.01 | Fe | ND1 A:His18 | 4.05 | Fe | CD2 A:His18 | 3.12 | Fe | CE1 A:His18 | 2.90 | Fe | CG A:His18 | 4.18 | Fe | CB A:Ala74 | 4.87 | Fe | NE2 A:His75 | 2.11 | Fe | ND1 A:His75 | 4.20 | Fe | CD2 A:His75 | 3.08 | Fe | CE1 A:His75 | 3.09 | Fe | CG A:His75 | 4.22 | Fe | C2D A:Hem801 | 4.27 | Fe | NC A:Hem801 | 2.01 | Fe | CHB A:Hem801 | 3.43 | Fe | CHC A:Hem801 | 3.41 | Fe | C3D A:Hem801 | 4.26 | Fe | NA A:Hem801 | 2.00 | Fe | CHA A:Hem801 | 3.36 | Fe | C2A A:Hem801 | 4.25 | Fe | C1D A:Hem801 | 3.05 | Fe | C4A A:Hem801 | 3.05 | Fe | C4B A:Hem801 | 3.02 | Fe | C3A A:Hem801 | 4.27 | Fe | C4C A:Hem801 | 3.05 | Fe | C2B A:Hem801 | 4.25 | Fe | C1C A:Hem801 | 3.05 | Fe | C2C A:Hem801 | 4.25 | Fe | ND A:Hem801 | 2.02 | Fe | CHD A:Hem801 | 3.44 | Fe | C1B A:Hem801 | 3.04 | Fe | NB A:Hem801 | 2.03 | Fe | FE A:Hem801 | 0.00 | Fe | C3C A:Hem801 | 4.24 | Fe | C3B A:Hem801 | 4.23 | Fe | C4D A:Hem801 | 3.05 | Fe | C1A A:Hem801 | 3.02 | Fe | O A:Hoh3164 | 4.94 |
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Iron binding site 2 out of 8 in 1ksu
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Iron in the PDB 1ksu. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: His8, A: His40, A: Hem802, |
conact list:
Atom | Atom | Distance (A) | Fe | NE2 A:His8 | 2.15 | Fe | ND1 A:His8 | 4.32 | Fe | CD2 A:His8 | 3.12 | Fe | CE1 A:His8 | 3.17 | Fe | CG A:His8 | 4.26 | Fe | NE2 A:His40 | 2.02 | Fe | ND1 A:His40 | 4.14 | Fe | CD2 A:His40 | 2.99 | Fe | CE1 A:His40 | 3.05 | Fe | CG A:His40 | 4.14 | Fe | C2D A:Hem802 | 4.26 | Fe | NC A:Hem802 | 1.98 | Fe | CHB A:Hem802 | 3.35 | Fe | CHC A:Hem802 | 3.39 | Fe | C3D A:Hem802 | 4.26 | Fe | NA A:Hem802 | 2.01 | Fe | CHA A:Hem802 | 3.41 | Fe | C2A A:Hem802 | 4.25 | Fe | C1D A:Hem802 | 3.03 | Fe | C4A A:Hem802 | 3.05 | Fe | C4B A:Hem802 | 3.01 | Fe | C3A A:Hem802 | 4.26 | Fe | C4C A:Hem802 | 3.00 | Fe | C2B A:Hem802 | 4.23 | Fe | C1C A:Hem802 | 3.02 | Fe | C2C A:Hem802 | 4.24 | Fe | ND A:Hem802 | 2.02 | Fe | CHD A:Hem802 | 3.37 | Fe | C1B A:Hem802 | 3.01 | Fe | NB A:Hem802 | 2.01 | Fe | FE A:Hem802 | 0.00 | Fe | C3C A:Hem802 | 4.22 | Fe | C3B A:Hem802 | 4.21 | Fe | C4D A:Hem802 | 3.04 | Fe | C1A A:Hem802 | 3.04 |
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Iron binding site 3 out of 8 in 1ksu
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 3 of Iron in the PDB 1ksu. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: Val46, A: His58, A: His72, A: Hem803, |
conact list:
Atom | Atom | Distance (A) | Fe | CG1 A:Val46 | 4.90 | Fe | NE2 A:His58 | 2.04 | Fe | ND1 A:His58 | 4.09 | Fe | CD2 A:His58 | 3.14 | Fe | CE1 A:His58 | 2.92 | Fe | CG A:His58 | 4.21 | Fe | NE2 A:His72 | 2.06 | Fe | ND1 A:His72 | 4.13 | Fe | CD2 A:His72 | 3.08 | Fe | CE1 A:His72 | 2.99 | Fe | CG A:His72 | 4.20 | Fe | C2D A:Hem803 | 4.25 | Fe | NC A:Hem803 | 2.01 | Fe | CHB A:Hem803 | 3.44 | Fe | CHC A:Hem803 | 3.39 | Fe | C3D A:Hem803 | 4.25 | Fe | NA A:Hem803 | 2.04 | Fe | CHA A:Hem803 | 3.42 | Fe | C2A A:Hem803 | 4.28 | Fe | C1D A:Hem803 | 3.03 | Fe | C4A A:Hem803 | 3.06 | Fe | C4B A:Hem803 | 3.00 | Fe | C3A A:Hem803 | 4.29 | Fe | C4C A:Hem803 | 3.03 | Fe | C2B A:Hem803 | 4.22 | Fe | C1C A:Hem803 | 3.03 | Fe | C2C A:Hem803 | 4.25 | Fe | ND A:Hem803 | 2.00 | Fe | CHD A:Hem803 | 3.40 | Fe | C1B A:Hem803 | 3.03 | Fe | NB A:Hem803 | 1.97 | Fe | FE A:Hem803 | 0.00 | Fe | C3C A:Hem803 | 4.25 | Fe | C3B A:Hem803 | 4.20 | Fe | C4D A:Hem803 | 3.04 | Fe | C1A A:Hem803 | 3.06 |
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Iron binding site 4 out of 8 in 1ksu
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 4 of Iron in the PDB 1ksu. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: A: His61, A: His86, A: Hem804, |
conact list:
Atom | Atom | Distance (A) | Fe | NE2 A:His61 | 2.04 | Fe | ND1 A:His61 | 4.15 | Fe | CD2 A:His61 | 3.10 | Fe | CE1 A:His61 | 3.02 | Fe | CG A:His61 | 4.22 | Fe | NE2 A:His86 | 2.02 | Fe | ND1 A:His86 | 4.09 | Fe | CD2 A:His86 | 3.01 | Fe | CE1 A:His86 | 3.00 | Fe | CG A:His86 | 4.14 | Fe | C2D A:Hem804 | 4.27 | Fe | NC A:Hem804 | 2.02 | Fe | CHB A:Hem804 | 3.43 | Fe | CHC A:Hem804 | 3.42 | Fe | C3D A:Hem804 | 4.26 | Fe | NA A:Hem804 | 2.00 | Fe | CHA A:Hem804 | 3.40 | Fe | C2A A:Hem804 | 4.24 | Fe | C1D A:Hem804 | 3.04 | Fe | C4A A:Hem804 | 3.03 | Fe | C4B A:Hem804 | 3.02 | Fe | C3A A:Hem804 | 4.24 | Fe | C4C A:Hem804 | 3.05 | Fe | C2B A:Hem804 | 4.25 | Fe | C1C A:Hem804 | 3.07 | Fe | C2C A:Hem804 | 4.29 | Fe | ND A:Hem804 | 2.01 | Fe | CHD A:Hem804 | 3.37 | Fe | C1B A:Hem804 | 3.06 | Fe | NB A:Hem804 | 2.04 | Fe | FE A:Hem804 | 0.00 | Fe | C3C A:Hem804 | 4.27 | Fe | C3B A:Hem804 | 4.22 | Fe | C4D A:Hem804 | 3.05 | Fe | C1A A:Hem804 | 3.03 |
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Iron binding site 5 out of 8 in 1ksu
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 5 of Iron in the PDB 1ksu. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: B: His18, B: Ala74, B: His75, B: Hem801, |
conact list:
Atom | Atom | Distance (A) | Fe | NE2 B:His18 | 2.02 | Fe | ND1 B:His18 | 4.10 | Fe | CD2 B:His18 | 3.09 | Fe | CE1 B:His18 | 2.97 | Fe | CG B:His18 | 4.19 | Fe | CB B:Ala74 | 4.97 | Fe | NE2 B:His75 | 2.07 | Fe | ND1 B:His75 | 4.17 | Fe | CD2 B:His75 | 3.06 | Fe | CE1 B:His75 | 3.07 | Fe | CG B:His75 | 4.21 | Fe | C2D B:Hem801 | 4.26 | Fe | NC B:Hem801 | 2.01 | Fe | CHB B:Hem801 | 3.40 | Fe | CHC B:Hem801 | 3.38 | Fe | C3D B:Hem801 | 4.25 | Fe | NA B:Hem801 | 2.00 | Fe | CHA B:Hem801 | 3.41 | Fe | C2A B:Hem801 | 4.26 | Fe | C1D B:Hem801 | 3.02 | Fe | C4A B:Hem801 | 3.05 | Fe | C4B B:Hem801 | 3.00 | Fe | C3A B:Hem801 | 4.26 | Fe | C4C B:Hem801 | 3.05 | Fe | C2B B:Hem801 | 4.24 | Fe | C1C B:Hem801 | 3.04 | Fe | C2C B:Hem801 | 4.26 | Fe | ND B:Hem801 | 2.02 | Fe | CHD B:Hem801 | 3.39 | Fe | C1B B:Hem801 | 3.01 | Fe | NB B:Hem801 | 2.00 | Fe | FE B:Hem801 | 0.00 | Fe | C3C B:Hem801 | 4.26 | Fe | C3B B:Hem801 | 4.21 | Fe | C4D B:Hem801 | 3.06 | Fe | C1A B:Hem801 | 3.05 |
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Iron binding site 6 out of 8 in 1ksu
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 6 of Iron in the PDB 1ksu. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: B: His8, B: His40, B: Hem802, |
conact list:
Atom | Atom | Distance (A) | Fe | NE2 B:His8 | 2.08 | Fe | ND1 B:His8 | 4.13 | Fe | CD2 B:His8 | 3.13 | Fe | CE1 B:His8 | 2.98 | Fe | CG B:His8 | 4.22 | Fe | NE2 B:His40 | 2.13 | Fe | ND1 B:His40 | 4.25 | Fe | CD2 B:His40 | 3.09 | Fe | CE1 B:His40 | 3.16 | Fe | CG B:His40 | 4.26 | Fe | C2D B:Hem802 | 4.26 | Fe | NC B:Hem802 | 1.98 | Fe | CHB B:Hem802 | 3.40 | Fe | CHC B:Hem802 | 3.37 | Fe | C3D B:Hem802 | 4.26 | Fe | NA B:Hem802 | 1.99 | Fe | CHA B:Hem802 | 3.38 | Fe | C2A B:Hem802 | 4.23 | Fe | C1D B:Hem802 | 3.01 | Fe | C4A B:Hem802 | 3.05 | Fe | C4B B:Hem802 | 2.99 | Fe | C3A B:Hem802 | 4.25 | Fe | C4C B:Hem802 | 3.02 | Fe | C2B B:Hem802 | 4.22 | Fe | C1C B:Hem802 | 3.03 | Fe | C2C B:Hem802 | 4.25 | Fe | ND B:Hem802 | 2.01 | Fe | CHD B:Hem802 | 3.37 | Fe | C1B B:Hem802 | 3.01 | Fe | NB B:Hem802 | 2.00 | Fe | FE B:Hem802 | 0.00 | Fe | C3C B:Hem802 | 4.23 | Fe | C3B B:Hem802 | 4.20 | Fe | C4D B:Hem802 | 3.05 | Fe | C1A B:Hem802 | 3.01 |
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Iron binding site 7 out of 8 in 1ksu
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 7 of Iron in the PDB 1ksu. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: B: Val46, B: His58, B: His72, B: Hem803, |
conact list:
Atom | Atom | Distance (A) | Fe | CG1 B:Val46 | 4.92 | Fe | NE2 B:His58 | 2.12 | Fe | ND1 B:His58 | 4.21 | Fe | CD2 B:His58 | 3.07 | Fe | CE1 B:His58 | 3.10 | Fe | CG B:His58 | 4.21 | Fe | NE2 B:His72 | 2.05 | Fe | ND1 B:His72 | 4.11 | Fe | CD2 B:His72 | 3.08 | Fe | CE1 B:His72 | 3.01 | Fe | CG B:His72 | 4.18 | Fe | C2D B:Hem803 | 4.24 | Fe | NC B:Hem803 | 2.01 | Fe | CHB B:Hem803 | 3.41 | Fe | CHC B:Hem803 | 3.34 | Fe | C3D B:Hem803 | 4.23 | Fe | NA B:Hem803 | 2.02 | Fe | CHA B:Hem803 | 3.42 | Fe | C2A B:Hem803 | 4.25 | Fe | C1D B:Hem803 | 3.03 | Fe | C4A B:Hem803 | 3.04 | Fe | C4B B:Hem803 | 2.98 | Fe | C3A B:Hem803 | 4.27 | Fe | C4C B:Hem803 | 3.03 | Fe | C2B B:Hem803 | 4.22 | Fe | C1C B:Hem803 | 3.01 | Fe | C2C B:Hem803 | 4.25 | Fe | ND B:Hem803 | 1.99 | Fe | CHD B:Hem803 | 3.44 | Fe | C1B B:Hem803 | 3.03 | Fe | NB B:Hem803 | 1.98 | Fe | FE B:Hem803 | 0.00 | Fe | C3C B:Hem803 | 4.25 | Fe | C3B B:Hem803 | 4.17 | Fe | C4D B:Hem803 | 3.03 | Fe | C1A B:Hem803 | 3.04 |
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Iron binding site 8 out of 8 in 1ksu
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 Click to enlarge |  Click to enlarge | Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 8 of Iron in the PDB 1ksu. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Iron atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: B: His61, B: His86, B: Hem804, |
conact list:
Atom | Atom | Distance (A) | Fe | NE2 B:His61 | 2.11 | Fe | ND1 B:His61 | 4.20 | Fe | CD2 B:His61 | 3.07 | Fe | CE1 B:His61 | 3.10 | Fe | CG B:His61 | 4.22 | Fe | NE2 B:His86 | 1.96 | Fe | ND1 B:His86 | 4.05 | Fe | CD2 B:His86 | 3.06 | Fe | CE1 B:His86 | 2.89 | Fe | CG B:His86 | 4.14 | Fe | C2D B:Hem804 | 4.26 | Fe | NC B:Hem804 | 2.00 | Fe | CHB B:Hem804 | 3.44 | Fe | CHC B:Hem804 | 3.41 | Fe | C3D B:Hem804 | 4.25 | Fe | NA B:Hem804 | 2.01 | Fe | CHA B:Hem804 | 3.42 | Fe | C2A B:Hem804 | 4.24 | Fe | C1D B:Hem804 | 3.03 | Fe | C4A B:Hem804 | 3.05 | Fe | C4B B:Hem804 | 3.03 | Fe | C3A B:Hem804 | 4.28 | Fe | C4C B:Hem804 | 3.02 | Fe | C2B B:Hem804 | 4.26 | Fe | C1C B:Hem804 | 3.05 | Fe | C2C B:Hem804 | 4.27 | Fe | ND B:Hem804 | 2.00 | Fe | CHD B:Hem804 | 3.41 | Fe | C1B B:Hem804 | 3.05 | Fe | NB B:Hem804 | 2.03 | Fe | FE B:Hem804 | 0.00 | Fe | C3C B:Hem804 | 4.24 | Fe | C3B B:Hem804 | 4.23 | Fe | C4D B:Hem804 | 3.04 | Fe | C1A B:Hem804 | 3.03 |
| interactive model:
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