Iron in PDB 1l6u: uc(Nmr) Structure of Oxidized Adrenodoxin
Iron Binding Sites:
The binding sites of Iron atom in the uc(Nmr) Structure of Oxidized Adrenodoxin
(pdb code 1l6u). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the
uc(Nmr) Structure of Oxidized Adrenodoxin, PDB code: 1l6u:
Jump to Iron binding site number:
1;
2;
Iron binding site 1 out
of 2 in 1l6u
Go back to
Iron Binding Sites List in 1l6u
Iron binding site 1 out
of 2 in the uc(Nmr) Structure of Oxidized Adrenodoxin
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of uc(Nmr) Structure of Oxidized Adrenodoxin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe146
b:0.0
occ:1.00
|
FE1
|
A:FES146
|
0.0
|
0.0
|
1.0
|
SG
|
A:CYS52
|
1.5
|
0.0
|
1.0
|
SG
|
A:CYS46
|
2.2
|
0.0
|
1.0
|
S2
|
A:FES146
|
2.4
|
0.0
|
1.0
|
S1
|
A:FES146
|
2.4
|
0.0
|
1.0
|
HG
|
A:CYS52
|
2.6
|
0.0
|
1.0
|
H
|
A:CYS46
|
2.9
|
0.0
|
1.0
|
FE2
|
A:FES146
|
2.9
|
0.0
|
1.0
|
CB
|
A:CYS52
|
2.9
|
0.0
|
1.0
|
HB3
|
A:CYS52
|
3.1
|
0.0
|
1.0
|
H
|
A:ALA45
|
3.1
|
0.0
|
1.0
|
H
|
A:GLY48
|
3.2
|
0.0
|
1.0
|
H
|
A:SER53
|
3.3
|
0.0
|
1.0
|
H
|
A:ALA51
|
3.3
|
0.0
|
1.0
|
HA2
|
A:GLY48
|
3.3
|
0.0
|
1.0
|
CB
|
A:CYS46
|
3.4
|
0.0
|
1.0
|
H
|
A:CYS52
|
3.5
|
0.0
|
1.0
|
HB3
|
A:CYS46
|
3.5
|
0.0
|
1.0
|
N
|
A:CYS46
|
3.7
|
0.0
|
1.0
|
HB2
|
A:CYS55
|
3.7
|
0.0
|
1.0
|
H
|
A:LEU50
|
3.7
|
0.0
|
1.0
|
HB2
|
A:CYS52
|
3.7
|
0.0
|
1.0
|
N
|
A:CYS52
|
3.7
|
0.0
|
1.0
|
HA2
|
A:GLY44
|
3.8
|
0.0
|
1.0
|
CA
|
A:CYS52
|
3.8
|
0.0
|
1.0
|
N
|
A:GLY48
|
3.9
|
0.0
|
1.0
|
CA
|
A:CYS46
|
3.9
|
0.0
|
1.0
|
N
|
A:SER53
|
4.0
|
0.0
|
1.0
|
H
|
A:THR54
|
4.0
|
0.0
|
1.0
|
N
|
A:ALA45
|
4.0
|
0.0
|
1.0
|
CA
|
A:GLY48
|
4.1
|
0.0
|
1.0
|
H
|
A:THR49
|
4.1
|
0.0
|
1.0
|
HA3
|
A:GLY44
|
4.2
|
0.0
|
1.0
|
HA
|
A:LEU50
|
4.2
|
0.0
|
1.0
|
N
|
A:ALA51
|
4.2
|
0.0
|
1.0
|
H
|
A:GLU47
|
4.3
|
0.0
|
1.0
|
HB2
|
A:CYS46
|
4.3
|
0.0
|
1.0
|
C
|
A:CYS46
|
4.4
|
0.0
|
1.0
|
C
|
A:CYS52
|
4.4
|
0.0
|
1.0
|
CA
|
A:GLY44
|
4.4
|
0.0
|
1.0
|
HG1
|
A:THR54
|
4.5
|
0.0
|
1.0
|
N
|
A:GLU47
|
4.5
|
0.0
|
1.0
|
N
|
A:LEU50
|
4.5
|
0.0
|
1.0
|
C
|
A:ALA51
|
4.5
|
0.0
|
1.0
|
N
|
A:THR49
|
4.6
|
0.0
|
1.0
|
C
|
A:ALA45
|
4.7
|
0.0
|
1.0
|
CB
|
A:CYS55
|
4.7
|
0.0
|
1.0
|
C
|
A:GLY48
|
4.7
|
0.0
|
1.0
|
HA
|
A:CYS52
|
4.8
|
0.0
|
1.0
|
C
|
A:GLY44
|
4.8
|
0.0
|
1.0
|
HG
|
A:CYS92
|
4.8
|
0.0
|
1.0
|
CA
|
A:LEU50
|
4.8
|
0.0
|
1.0
|
HB3
|
A:CYS55
|
4.8
|
0.0
|
1.0
|
H
|
A:CYS55
|
4.9
|
0.0
|
1.0
|
OG1
|
A:THR54
|
4.9
|
0.0
|
1.0
|
N
|
A:THR54
|
4.9
|
0.0
|
1.0
|
HB2
|
A:ALA45
|
4.9
|
0.0
|
1.0
|
HA3
|
A:GLY48
|
4.9
|
0.0
|
1.0
|
CA
|
A:ALA45
|
4.9
|
0.0
|
1.0
|
HA
|
A:CYS46
|
4.9
|
0.0
|
1.0
|
HD23
|
A:LEU50
|
5.0
|
0.0
|
1.0
|
HA
|
A:SER53
|
5.0
|
0.0
|
1.0
|
|
Iron binding site 2 out
of 2 in 1l6u
Go back to
Iron Binding Sites List in 1l6u
Iron binding site 2 out
of 2 in the uc(Nmr) Structure of Oxidized Adrenodoxin
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of uc(Nmr) Structure of Oxidized Adrenodoxin within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe146
b:0.0
occ:1.00
|
FE2
|
A:FES146
|
0.0
|
0.0
|
1.0
|
S2
|
A:FES146
|
2.2
|
0.0
|
1.0
|
S1
|
A:FES146
|
2.2
|
0.0
|
1.0
|
HA2
|
A:GLY48
|
2.4
|
0.0
|
1.0
|
HB2
|
A:CYS55
|
2.6
|
0.0
|
1.0
|
HB2
|
A:CYS92
|
2.8
|
0.0
|
1.0
|
HB3
|
A:CYS55
|
2.9
|
0.0
|
1.0
|
FE1
|
A:FES146
|
2.9
|
0.0
|
1.0
|
CB
|
A:CYS55
|
3.1
|
0.0
|
1.0
|
HD21
|
A:LEU90
|
3.3
|
0.0
|
1.0
|
HG
|
A:CYS92
|
3.4
|
0.0
|
1.0
|
CA
|
A:GLY48
|
3.5
|
0.0
|
1.0
|
HG
|
A:LEU90
|
3.6
|
0.0
|
1.0
|
HG
|
A:CYS55
|
3.6
|
0.0
|
1.0
|
CB
|
A:CYS92
|
3.6
|
0.0
|
1.0
|
HD13
|
A:LEU90
|
3.7
|
0.0
|
1.0
|
SG
|
A:CYS55
|
3.7
|
0.0
|
1.0
|
HB3
|
A:CYS92
|
3.8
|
0.0
|
1.0
|
HA3
|
A:GLY48
|
3.8
|
0.0
|
1.0
|
SG
|
A:CYS52
|
3.8
|
0.0
|
1.0
|
CD2
|
A:LEU90
|
4.0
|
0.0
|
1.0
|
HD23
|
A:LEU50
|
4.0
|
0.0
|
1.0
|
H
|
A:GLY48
|
4.1
|
0.0
|
1.0
|
HD22
|
A:LEU90
|
4.1
|
0.0
|
1.0
|
CG
|
A:LEU90
|
4.1
|
0.0
|
1.0
|
HA3
|
A:GLY44
|
4.1
|
0.0
|
1.0
|
H
|
A:LEU50
|
4.2
|
0.0
|
1.0
|
O
|
A:GLY91
|
4.2
|
0.0
|
1.0
|
HG
|
A:CYS52
|
4.2
|
0.0
|
1.0
|
N
|
A:GLY48
|
4.2
|
0.0
|
1.0
|
CD1
|
A:LEU90
|
4.3
|
0.0
|
1.0
|
SG
|
A:CYS92
|
4.3
|
0.0
|
1.0
|
HD11
|
A:LEU90
|
4.3
|
0.0
|
1.0
|
C
|
A:GLY48
|
4.4
|
0.0
|
1.0
|
HA2
|
A:GLY44
|
4.4
|
0.0
|
1.0
|
SG
|
A:CYS46
|
4.4
|
0.0
|
1.0
|
H
|
A:HIS56
|
4.5
|
0.0
|
1.0
|
CA
|
A:CYS55
|
4.5
|
0.0
|
1.0
|
OE1
|
A:GLN93
|
4.6
|
0.0
|
1.0
|
H
|
A:CYS55
|
4.6
|
0.0
|
1.0
|
H
|
A:SER53
|
4.7
|
0.0
|
1.0
|
HA
|
A:LEU50
|
4.7
|
0.0
|
1.0
|
HD22
|
A:LEU30
|
4.7
|
0.0
|
1.0
|
CA
|
A:GLY44
|
4.8
|
0.0
|
1.0
|
C
|
A:GLY91
|
4.8
|
0.0
|
1.0
|
O
|
A:GLY48
|
4.8
|
0.0
|
1.0
|
N
|
A:CYS55
|
4.9
|
0.0
|
1.0
|
CA
|
A:CYS92
|
4.9
|
0.0
|
1.0
|
HD23
|
A:LEU90
|
5.0
|
0.0
|
1.0
|
|
Reference:
D.Beilke,
R.Weiss,
F.Lohr,
P.Pristovsek,
F.Hannemann,
R.Bernhardt,
H.Ruterjans.
A New Electron Transport Mechanism in Mitochondrial Steroid Hydroxylase Systems Based on Structural Changes Upon the Reduction of Adrenodoxin. Biochemistry V. 41 7969 2002.
ISSN: ISSN 0006-2960
PubMed: 12069587
DOI: 10.1021/BI0160361
Page generated: Sat Aug 3 09:37:53 2024
|