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Iron in PDB 1ldc: X-Ray Structure of Two Complexes of the Y143F Flavocytochrome B2 Mutant Crystallized in the Presence of Lactate or Phenyl-Lactate

Enzymatic activity of X-Ray Structure of Two Complexes of the Y143F Flavocytochrome B2 Mutant Crystallized in the Presence of Lactate or Phenyl-Lactate

All present enzymatic activity of X-Ray Structure of Two Complexes of the Y143F Flavocytochrome B2 Mutant Crystallized in the Presence of Lactate or Phenyl-Lactate:
1.1.2.3;

Protein crystallography data

The structure of X-Ray Structure of Two Complexes of the Y143F Flavocytochrome B2 Mutant Crystallized in the Presence of Lactate or Phenyl-Lactate, PDB code: 1ldc was solved by M.Tegoni, C.Cambillau, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 6.00 / 2.90
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 164.500, 164.500, 114.000, 90.00, 90.00, 120.00
R / Rfree (%) 19.5 / n/a

Iron Binding Sites:

The binding sites of Iron atom in the X-Ray Structure of Two Complexes of the Y143F Flavocytochrome B2 Mutant Crystallized in the Presence of Lactate or Phenyl-Lactate (pdb code 1ldc). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the X-Ray Structure of Two Complexes of the Y143F Flavocytochrome B2 Mutant Crystallized in the Presence of Lactate or Phenyl-Lactate, PDB code: 1ldc:

Iron binding site 1 out of 1 in 1ldc

Go back to Iron Binding Sites List in 1ldc
Iron binding site 1 out of 1 in the X-Ray Structure of Two Complexes of the Y143F Flavocytochrome B2 Mutant Crystallized in the Presence of Lactate or Phenyl-Lactate


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of X-Ray Structure of Two Complexes of the Y143F Flavocytochrome B2 Mutant Crystallized in the Presence of Lactate or Phenyl-Lactate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe560

b:69.8
occ:1.00
FE A:HEM560 0.0 69.8 1.0
ND A:HEM560 1.9 67.3 1.0
NA A:HEM560 1.9 72.6 1.0
NC A:HEM560 1.9 67.4 1.0
NB A:HEM560 2.0 69.7 1.0
NE2 A:HIS66 2.2 70.2 1.0
NE2 A:HIS43 2.3 74.7 1.0
C1D A:HEM560 3.0 64.9 1.0
C1A A:HEM560 3.0 73.0 1.0
C4C A:HEM560 3.0 67.4 1.0
C4D A:HEM560 3.0 66.9 1.0
C1C A:HEM560 3.0 65.6 1.0
C4A A:HEM560 3.0 73.7 1.0
C4B A:HEM560 3.0 70.1 1.0
C1B A:HEM560 3.0 70.6 1.0
CD2 A:HIS43 3.2 76.8 1.0
CD2 A:HIS66 3.2 70.4 1.0
CE1 A:HIS66 3.2 70.9 1.0
CE1 A:HIS43 3.3 76.9 1.0
CHD A:HEM560 3.3 66.5 1.0
CHA A:HEM560 3.3 69.2 1.0
CHC A:HEM560 3.4 66.9 1.0
CHB A:HEM560 3.4 70.9 1.0
C2D A:HEM560 4.2 65.4 1.0
C2A A:HEM560 4.2 75.6 1.0
C3D A:HEM560 4.2 66.2 1.0
C3C A:HEM560 4.2 65.9 1.0
C2C A:HEM560 4.2 65.8 1.0
C3A A:HEM560 4.2 74.3 1.0
C2B A:HEM560 4.2 71.5 1.0
C3B A:HEM560 4.3 72.2 1.0
CG A:HIS66 4.3 69.6 1.0
CG A:HIS43 4.3 77.7 1.0
ND1 A:HIS66 4.3 70.3 1.0
HHD A:HEM560 4.4 0.0 1.0
HHA A:HEM560 4.4 0.0 1.0
ND1 A:HIS43 4.4 77.6 1.0
HHC A:HEM560 4.5 0.0 1.0
HHB A:HEM560 4.5 0.0 1.0
CD1 A:PHE62 4.8 61.7 1.0
CE1 A:PHE62 4.8 61.8 1.0

Reference:

M.Tegoni, S.Begotti, C.Cambillau. X-Ray Structure of Two Complexes of the Y143F Flavocytochrome B2 Mutant Crystallized in the Presence of Lactate or Phenyl Lactate. Biochemistry V. 34 9840 1995.
ISSN: ISSN 0006-2960
PubMed: 7632684
DOI: 10.1021/BI00031A004
Page generated: Sat Aug 3 09:41:58 2024

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