Iron in PDB 1qgu: Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State
Enzymatic activity of Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State
All present enzymatic activity of Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State:
1.18.6.1;
Protein crystallography data
The structure of Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State, PDB code: 1qgu
was solved by
S.M.Mayer,
D.M.Lawson,
C.A.Gormal,
S.M.Roe,
B.E.Smith,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
50.00 /
1.60
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
204.030,
75.300,
163.010,
90.00,
122.61,
90.00
|
R / Rfree (%)
|
15.6 /
19.9
|
Other elements in 1qgu:
The structure of Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State also contains other interesting chemical elements:
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Binding sites:
The binding sites of Iron atom in the Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State
(pdb code 1qgu). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 30 binding sites of Iron where determined in the
Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State, PDB code: 1qgu:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 30 in 1qgu
Go back to
Iron Binding Sites List in 1qgu
Iron binding site 1 out
of 30 in the Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe503
b:11.6
occ:1.00
|
FE1
|
A:CFM503
|
0.0
|
11.6
|
1.0
|
S2A
|
A:CFM503
|
2.2
|
10.0
|
1.0
|
S4A
|
A:CFM503
|
2.3
|
10.6
|
1.0
|
S1A
|
A:CFM503
|
2.3
|
10.1
|
1.0
|
SG
|
A:CYS273
|
2.3
|
8.8
|
1.0
|
FE3
|
A:CFM503
|
2.6
|
10.4
|
1.0
|
FE2
|
A:CFM503
|
2.7
|
10.8
|
1.0
|
FE4
|
A:CFM503
|
2.7
|
10.5
|
1.0
|
CB
|
A:CYS273
|
3.3
|
10.3
|
1.0
|
OG
|
A:SER276
|
4.0
|
12.2
|
1.0
|
CB
|
A:LEU356
|
4.1
|
11.8
|
1.0
|
CB
|
A:SER276
|
4.3
|
10.9
|
1.0
|
CE2
|
A:TYR227
|
4.5
|
12.1
|
1.0
|
CA
|
A:CYS273
|
4.6
|
10.2
|
1.0
|
CD2
|
A:LEU356
|
4.7
|
10.6
|
1.0
|
S2B
|
A:CFM503
|
4.8
|
10.1
|
1.0
|
S5
|
A:CFM503
|
4.8
|
8.8
|
1.0
|
S3A
|
A:CFM503
|
4.8
|
8.9
|
1.0
|
N
|
A:SER276
|
4.9
|
12.3
|
1.0
|
CD2
|
A:TYR227
|
5.0
|
11.8
|
1.0
|
N
|
A:LEU356
|
5.0
|
10.8
|
1.0
|
FE6
|
A:CFM503
|
5.0
|
10.0
|
1.0
|
FE7
|
A:CFM503
|
5.0
|
9.6
|
1.0
|
|
Iron binding site 2 out
of 30 in 1qgu
Go back to
Iron Binding Sites List in 1qgu
Iron binding site 2 out
of 30 in the Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe503
b:10.8
occ:1.00
|
FE2
|
A:CFM503
|
0.0
|
10.8
|
1.0
|
S2B
|
A:CFM503
|
2.2
|
10.1
|
1.0
|
S1A
|
A:CFM503
|
2.2
|
10.1
|
1.0
|
S2A
|
A:CFM503
|
2.2
|
10.0
|
1.0
|
FE6
|
A:CFM503
|
2.6
|
10.0
|
1.0
|
FE1
|
A:CFM503
|
2.7
|
11.6
|
1.0
|
FE4
|
A:CFM503
|
2.7
|
10.5
|
1.0
|
FE3
|
A:CFM503
|
2.7
|
10.4
|
1.0
|
FE5
|
A:CFM503
|
3.7
|
10.3
|
1.0
|
FE7
|
A:CFM503
|
3.7
|
9.6
|
1.0
|
S4A
|
A:CFM503
|
3.9
|
10.6
|
1.0
|
NE2
|
A:HIS194
|
4.1
|
12.7
|
1.0
|
CZ
|
A:PHE379
|
4.1
|
14.0
|
1.0
|
CE1
|
A:HIS194
|
4.2
|
15.8
|
1.0
|
S3B
|
A:CFM503
|
4.2
|
9.3
|
1.0
|
S1B
|
A:CFM503
|
4.3
|
9.1
|
1.0
|
CG1
|
A:VAL69
|
4.5
|
16.0
|
1.0
|
S3A
|
A:CFM503
|
4.5
|
8.9
|
1.0
|
S5
|
A:CFM503
|
4.6
|
8.8
|
1.0
|
CE1
|
A:PHE379
|
4.6
|
10.8
|
1.0
|
SG
|
A:CYS273
|
4.7
|
8.8
|
1.0
|
CB
|
A:SER276
|
4.9
|
10.9
|
1.0
|
CG2
|
A:VAL69
|
5.0
|
13.8
|
1.0
|
|
Iron binding site 3 out
of 30 in 1qgu
Go back to
Iron Binding Sites List in 1qgu
Iron binding site 3 out
of 30 in the Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe503
b:10.4
occ:1.00
|
FE3
|
A:CFM503
|
0.0
|
10.4
|
1.0
|
S4A
|
A:CFM503
|
2.2
|
10.6
|
1.0
|
S5
|
A:CFM503
|
2.2
|
8.8
|
1.0
|
S2A
|
A:CFM503
|
2.3
|
10.0
|
1.0
|
FE7
|
A:CFM503
|
2.6
|
9.6
|
1.0
|
FE1
|
A:CFM503
|
2.6
|
11.6
|
1.0
|
FE4
|
A:CFM503
|
2.7
|
10.5
|
1.0
|
FE2
|
A:CFM503
|
2.7
|
10.8
|
1.0
|
FE6
|
A:CFM503
|
3.7
|
10.0
|
1.0
|
FE5
|
A:CFM503
|
3.7
|
10.3
|
1.0
|
S1A
|
A:CFM503
|
3.9
|
10.1
|
1.0
|
NH2
|
A:ARG95
|
4.1
|
9.5
|
1.0
|
O
|
A:HOH3028
|
4.1
|
12.6
|
1.0
|
CD2
|
A:TYR227
|
4.1
|
11.8
|
1.0
|
S3B
|
A:CFM503
|
4.2
|
9.3
|
1.0
|
S4B
|
A:CFM503
|
4.3
|
8.8
|
1.0
|
CE2
|
A:TYR227
|
4.4
|
12.1
|
1.0
|
S2B
|
A:CFM503
|
4.5
|
10.1
|
1.0
|
S3A
|
A:CFM503
|
4.5
|
8.9
|
1.0
|
SG
|
A:CYS273
|
4.8
|
8.8
|
1.0
|
|
Iron binding site 4 out
of 30 in 1qgu
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Iron Binding Sites List in 1qgu
Iron binding site 4 out
of 30 in the Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe503
b:10.5
occ:1.00
|
FE4
|
A:CFM503
|
0.0
|
10.5
|
1.0
|
S3A
|
A:CFM503
|
2.2
|
8.9
|
1.0
|
S4A
|
A:CFM503
|
2.3
|
10.6
|
1.0
|
S1A
|
A:CFM503
|
2.3
|
10.1
|
1.0
|
FE5
|
A:CFM503
|
2.6
|
10.3
|
1.0
|
FE1
|
A:CFM503
|
2.7
|
11.6
|
1.0
|
FE3
|
A:CFM503
|
2.7
|
10.4
|
1.0
|
FE2
|
A:CFM503
|
2.7
|
10.8
|
1.0
|
FE6
|
A:CFM503
|
3.7
|
10.0
|
1.0
|
FE7
|
A:CFM503
|
3.7
|
9.6
|
1.0
|
S2A
|
A:CFM503
|
3.8
|
10.0
|
1.0
|
N
|
A:LEU356
|
3.9
|
10.8
|
1.0
|
CB
|
A:LEU356
|
4.0
|
11.8
|
1.0
|
N
|
A:GLY355
|
4.0
|
12.3
|
1.0
|
S4B
|
A:CFM503
|
4.3
|
8.8
|
1.0
|
S1B
|
A:CFM503
|
4.3
|
9.1
|
1.0
|
C
|
A:GLY355
|
4.5
|
13.6
|
1.0
|
CA
|
A:LEU356
|
4.5
|
12.0
|
1.0
|
S5
|
A:CFM503
|
4.5
|
8.8
|
1.0
|
S2B
|
A:CFM503
|
4.5
|
10.1
|
1.0
|
N
|
A:ARG357
|
4.5
|
11.4
|
1.0
|
CA
|
A:GLY355
|
4.6
|
11.9
|
1.0
|
SG
|
A:CYS273
|
4.7
|
8.8
|
1.0
|
CG
|
A:ARG357
|
4.7
|
9.2
|
1.0
|
CD
|
A:ARG357
|
4.8
|
12.1
|
1.0
|
|
Iron binding site 5 out
of 30 in 1qgu
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Iron Binding Sites List in 1qgu
Iron binding site 5 out
of 30 in the Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe503
b:10.3
occ:1.00
|
FE5
|
A:CFM503
|
0.0
|
10.3
|
1.0
|
S4B
|
A:CFM503
|
2.2
|
8.8
|
1.0
|
S3A
|
A:CFM503
|
2.3
|
8.9
|
1.0
|
S1B
|
A:CFM503
|
2.3
|
9.1
|
1.0
|
FE4
|
A:CFM503
|
2.6
|
10.5
|
1.0
|
FE7
|
A:CFM503
|
2.6
|
9.6
|
1.0
|
FE6
|
A:CFM503
|
2.7
|
10.0
|
1.0
|
MO1
|
A:CFM503
|
2.7
|
10.9
|
1.0
|
FE2
|
A:CFM503
|
3.7
|
10.8
|
1.0
|
FE3
|
A:CFM503
|
3.7
|
10.4
|
1.0
|
ND1
|
A:HIS440
|
3.8
|
11.7
|
1.0
|
S3B
|
A:CFM503
|
3.9
|
9.3
|
1.0
|
N
|
A:GLY354
|
4.1
|
12.9
|
1.0
|
CE1
|
A:HIS440
|
4.2
|
10.4
|
1.0
|
CA
|
A:GLY354
|
4.3
|
10.7
|
1.0
|
S1A
|
A:CFM503
|
4.3
|
10.1
|
1.0
|
S4A
|
A:CFM503
|
4.3
|
10.6
|
1.0
|
S5
|
A:CFM503
|
4.5
|
8.8
|
1.0
|
S2B
|
A:CFM503
|
4.5
|
10.1
|
1.0
|
CG
|
A:HIS440
|
4.6
|
9.1
|
1.0
|
CD
|
A:ARG357
|
4.7
|
12.1
|
1.0
|
N
|
A:GLY355
|
4.7
|
12.3
|
1.0
|
O7
|
A:HCA501
|
4.8
|
10.1
|
1.0
|
O5
|
A:HCA501
|
4.8
|
8.7
|
1.0
|
CB
|
A:MET353
|
4.9
|
10.5
|
1.0
|
|
Iron binding site 6 out
of 30 in 1qgu
Go back to
Iron Binding Sites List in 1qgu
Iron binding site 6 out
of 30 in the Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe503
b:10.0
occ:1.00
|
FE6
|
A:CFM503
|
0.0
|
10.0
|
1.0
|
S2B
|
A:CFM503
|
2.2
|
10.1
|
1.0
|
S3B
|
A:CFM503
|
2.2
|
9.3
|
1.0
|
S1B
|
A:CFM503
|
2.3
|
9.1
|
1.0
|
FE2
|
A:CFM503
|
2.6
|
10.8
|
1.0
|
FE7
|
A:CFM503
|
2.6
|
9.6
|
1.0
|
FE5
|
A:CFM503
|
2.7
|
10.3
|
1.0
|
MO1
|
A:CFM503
|
2.7
|
10.9
|
1.0
|
FE3
|
A:CFM503
|
3.7
|
10.4
|
1.0
|
FE4
|
A:CFM503
|
3.7
|
10.5
|
1.0
|
S4B
|
A:CFM503
|
3.8
|
8.8
|
1.0
|
O7
|
A:HCA501
|
3.9
|
10.1
|
1.0
|
CZ
|
A:PHE379
|
4.2
|
14.0
|
1.0
|
S2A
|
A:CFM503
|
4.3
|
10.0
|
1.0
|
S1A
|
A:CFM503
|
4.3
|
10.1
|
1.0
|
CG2
|
A:VAL69
|
4.4
|
13.8
|
1.0
|
O2
|
A:HCA501
|
4.5
|
13.9
|
1.0
|
S5
|
A:CFM503
|
4.5
|
8.8
|
1.0
|
S3A
|
A:CFM503
|
4.5
|
8.9
|
1.0
|
O5
|
A:HCA501
|
4.6
|
8.7
|
1.0
|
CE2
|
A:PHE379
|
4.6
|
12.4
|
1.0
|
ND1
|
A:HIS440
|
4.8
|
11.7
|
1.0
|
C3
|
A:HCA501
|
5.0
|
10.3
|
1.0
|
C2
|
A:HCA501
|
5.0
|
10.1
|
1.0
|
FE1
|
A:CFM503
|
5.0
|
11.6
|
1.0
|
|
Iron binding site 7 out
of 30 in 1qgu
Go back to
Iron Binding Sites List in 1qgu
Iron binding site 7 out
of 30 in the Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe503
b:9.6
occ:1.00
|
FE7
|
A:CFM503
|
0.0
|
9.6
|
1.0
|
S5
|
A:CFM503
|
2.2
|
8.8
|
1.0
|
S4B
|
A:CFM503
|
2.2
|
8.8
|
1.0
|
S3B
|
A:CFM503
|
2.2
|
9.3
|
1.0
|
FE3
|
A:CFM503
|
2.6
|
10.4
|
1.0
|
FE6
|
A:CFM503
|
2.6
|
10.0
|
1.0
|
FE5
|
A:CFM503
|
2.6
|
10.3
|
1.0
|
MO1
|
A:CFM503
|
2.7
|
10.9
|
1.0
|
FE2
|
A:CFM503
|
3.7
|
10.8
|
1.0
|
FE4
|
A:CFM503
|
3.7
|
10.5
|
1.0
|
O
|
A:HOH3009
|
3.8
|
10.4
|
1.0
|
O5
|
A:HCA501
|
3.8
|
8.7
|
1.0
|
S1B
|
A:CFM503
|
3.8
|
9.1
|
1.0
|
NE
|
A:ARG95
|
4.0
|
10.9
|
1.0
|
NH2
|
A:ARG95
|
4.2
|
9.5
|
1.0
|
S4A
|
A:CFM503
|
4.3
|
10.6
|
1.0
|
S2A
|
A:CFM503
|
4.3
|
10.0
|
1.0
|
S2B
|
A:CFM503
|
4.4
|
10.1
|
1.0
|
S3A
|
A:CFM503
|
4.5
|
8.9
|
1.0
|
CZ
|
A:ARG95
|
4.7
|
9.5
|
1.0
|
C7
|
A:HCA501
|
4.7
|
11.8
|
1.0
|
O7
|
A:HCA501
|
4.8
|
10.1
|
1.0
|
ND1
|
A:HIS440
|
4.8
|
11.7
|
1.0
|
NH1
|
A:ARG357
|
4.8
|
9.3
|
1.0
|
CZ
|
A:ARG357
|
4.9
|
11.5
|
1.0
|
FE1
|
A:CFM503
|
5.0
|
11.6
|
1.0
|
|
Iron binding site 8 out
of 30 in 1qgu
Go back to
Iron Binding Sites List in 1qgu
Iron binding site 8 out
of 30 in the Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe505
b:13.6
occ:1.00
|
FE1
|
A:CLF505
|
0.0
|
13.6
|
1.0
|
S3A
|
A:CLF505
|
2.3
|
11.4
|
1.0
|
S2A
|
A:CLF505
|
2.4
|
11.4
|
1.0
|
SG
|
A:CYS153
|
2.4
|
12.4
|
1.0
|
S1
|
A:CLF505
|
2.4
|
9.8
|
1.0
|
FE4
|
A:CLF505
|
2.5
|
12.4
|
1.0
|
FE2
|
A:CLF505
|
2.5
|
12.8
|
1.0
|
FE3
|
A:CLF505
|
2.8
|
13.3
|
1.0
|
CB
|
A:CYS153
|
3.5
|
16.1
|
1.0
|
S4A
|
A:CLF505
|
3.8
|
9.0
|
1.0
|
O
|
B:HOH3086
|
3.8
|
15.8
|
1.0
|
N
|
A:CYS153
|
3.8
|
13.7
|
1.0
|
OG
|
B:SER90
|
3.9
|
12.4
|
0.5
|
CA
|
A:GLY184
|
4.0
|
11.6
|
1.0
|
N
|
A:GLY184
|
4.1
|
11.8
|
1.0
|
SG
|
B:CYS93
|
4.2
|
10.8
|
1.0
|
CA
|
A:CYS153
|
4.2
|
14.1
|
1.0
|
OG
|
B:SER90
|
4.5
|
20.8
|
0.5
|
FE8
|
A:CLF505
|
4.5
|
12.9
|
1.0
|
FE5
|
A:CLF505
|
4.5
|
12.4
|
1.0
|
SG
|
A:CYS87
|
4.7
|
10.2
|
1.0
|
C
|
A:GLY184
|
4.7
|
19.4
|
1.0
|
FE6
|
A:CLF505
|
4.8
|
12.8
|
1.0
|
CB
|
B:SER90
|
4.8
|
20.1
|
0.5
|
C
|
A:GLU152
|
4.9
|
13.4
|
1.0
|
CB
|
B:SER90
|
4.9
|
15.9
|
0.5
|
SG
|
B:CYS151
|
5.0
|
11.8
|
1.0
|
SG
|
A:CYS61
|
5.0
|
11.2
|
1.0
|
|
Iron binding site 9 out
of 30 in 1qgu
Go back to
Iron Binding Sites List in 1qgu
Iron binding site 9 out
of 30 in the Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe505
b:12.8
occ:1.00
|
FE2
|
A:CLF505
|
0.0
|
12.8
|
1.0
|
S4A
|
A:CLF505
|
2.3
|
9.0
|
1.0
|
S2A
|
A:CLF505
|
2.3
|
11.4
|
1.0
|
SG
|
B:CYS93
|
2.3
|
10.8
|
1.0
|
S1
|
A:CLF505
|
2.5
|
9.8
|
1.0
|
FE1
|
A:CLF505
|
2.5
|
13.6
|
1.0
|
FE4
|
A:CLF505
|
2.6
|
12.4
|
1.0
|
FE3
|
A:CLF505
|
2.7
|
13.3
|
1.0
|
FE8
|
A:CLF505
|
3.0
|
12.9
|
1.0
|
N
|
B:CYS93
|
3.2
|
9.5
|
1.0
|
CB
|
B:CYS93
|
3.5
|
14.4
|
1.0
|
CA
|
B:CYS93
|
3.5
|
13.4
|
1.0
|
FE5
|
A:CLF505
|
3.8
|
12.4
|
1.0
|
S3A
|
A:CLF505
|
3.9
|
11.4
|
1.0
|
C
|
B:GLY92
|
3.9
|
13.6
|
1.0
|
S4B
|
A:CLF505
|
3.9
|
8.5
|
1.0
|
OG
|
B:SER90
|
4.2
|
12.4
|
0.5
|
CA
|
B:GLY92
|
4.4
|
12.2
|
1.0
|
O
|
B:HOH3086
|
4.4
|
15.8
|
1.0
|
FE6
|
A:CLF505
|
4.6
|
12.8
|
1.0
|
SG
|
A:CYS153
|
4.6
|
12.4
|
1.0
|
N
|
B:GLY92
|
4.7
|
12.8
|
1.0
|
SG
|
A:CYS87
|
4.7
|
10.2
|
1.0
|
O
|
B:GLY92
|
4.7
|
12.6
|
1.0
|
O
|
B:SER90
|
4.8
|
14.0
|
1.0
|
SG
|
A:CYS61
|
4.9
|
11.2
|
1.0
|
OG
|
B:SER90
|
4.9
|
20.8
|
0.5
|
|
Iron binding site 10 out
of 30 in 1qgu
Go back to
Iron Binding Sites List in 1qgu
Iron binding site 10 out
of 30 in the Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Nitrogenase Mo-Fe Protein From Klebsiella Pneumoniae, Dithionite-Reduced State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe505
b:13.3
occ:1.00
|
FE3
|
A:CLF505
|
0.0
|
13.3
|
1.0
|
S4A
|
A:CLF505
|
2.3
|
9.0
|
1.0
|
S2A
|
A:CLF505
|
2.3
|
11.4
|
1.0
|
S3A
|
A:CLF505
|
2.4
|
11.4
|
1.0
|
SG
|
A:CYS61
|
2.4
|
11.2
|
1.0
|
FE4
|
A:CLF505
|
2.7
|
12.4
|
1.0
|
FE2
|
A:CLF505
|
2.7
|
12.8
|
1.0
|
FE1
|
A:CLF505
|
2.8
|
13.6
|
1.0
|
CB
|
A:CYS61
|
3.4
|
11.4
|
1.0
|
CA
|
A:GLY184
|
3.9
|
11.6
|
1.0
|
CB
|
A:TYR63
|
4.1
|
12.2
|
1.0
|
CA
|
B:GLY92
|
4.2
|
12.2
|
1.0
|
S1
|
A:CLF505
|
4.3
|
9.8
|
1.0
|
N
|
A:GLY184
|
4.4
|
11.8
|
1.0
|
C
|
B:GLY92
|
4.5
|
13.6
|
1.0
|
CD1
|
A:TYR63
|
4.5
|
13.1
|
1.0
|
N
|
B:CYS93
|
4.5
|
9.5
|
1.0
|
CG
|
A:TYR63
|
4.7
|
10.6
|
1.0
|
SG
|
A:CYS153
|
4.8
|
12.4
|
1.0
|
CA
|
A:CYS61
|
4.8
|
12.0
|
1.0
|
O
|
B:HOH3064
|
4.9
|
14.5
|
1.0
|
N
|
B:GLY92
|
4.9
|
12.8
|
1.0
|
N
|
A:TYR63
|
4.9
|
12.3
|
1.0
|
C
|
A:GLY184
|
4.9
|
19.4
|
1.0
|
SG
|
A:CYS87
|
4.9
|
10.2
|
1.0
|
SG
|
B:CYS93
|
5.0
|
10.8
|
1.0
|
|
Reference:
S.M.Mayer,
D.M.Lawson,
C.A.Gormal,
S.M.Roe,
B.E.Smith.
New Insights Into Structure-Function Relationships in Nitrogenase: A 1.6 A Resolution X-Ray Crystallographic Study of Klebsiella Pneumoniae Mofe-Protein. J.Mol.Biol. V. 292 871 1999.
ISSN: ISSN 0022-2836
PubMed: 10525412
DOI: 10.1006/JMBI.1999.3107
Page generated: Sat Aug 3 13:25:19 2024
|