Iron in PDB 1sp3: Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis
Protein crystallography data
The structure of Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis, PDB code: 1sp3
was solved by
C.G.Mowat,
E.Rothery,
C.S.Miles,
L.Mciver,
M.K.Doherty,
K.Drewette,
P.Taylor,
M.D.Walkinshaw,
S.K.Chapman,
G.A.Reid,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
23.77 /
2.20
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
40.590,
61.767,
185.237,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
15.5 /
25.2
|
Iron Binding Sites:
The binding sites of Iron atom in the Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis
(pdb code 1sp3). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the
Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis, PDB code: 1sp3:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Iron binding site 1 out
of 8 in 1sp3
Go back to
Iron Binding Sites List in 1sp3
Iron binding site 1 out
of 8 in the Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe801
b:35.8
occ:1.00
|
FE
|
A:HEM801
|
0.0
|
35.8
|
1.0
|
NC
|
A:HEM801
|
2.0
|
34.7
|
1.0
|
ND
|
A:HEM801
|
2.0
|
30.6
|
1.0
|
NA
|
A:HEM801
|
2.0
|
32.9
|
1.0
|
NE2
|
A:HIS26
|
2.1
|
29.0
|
1.0
|
NB
|
A:HEM801
|
2.1
|
35.9
|
1.0
|
NE2
|
A:HIS4
|
2.1
|
30.3
|
1.0
|
C4D
|
A:HEM801
|
3.0
|
29.5
|
1.0
|
C1A
|
A:HEM801
|
3.0
|
34.1
|
1.0
|
C4C
|
A:HEM801
|
3.0
|
32.9
|
1.0
|
CD2
|
A:HIS4
|
3.0
|
28.5
|
1.0
|
CD2
|
A:HIS26
|
3.0
|
30.2
|
1.0
|
C1D
|
A:HEM801
|
3.0
|
34.6
|
1.0
|
C1C
|
A:HEM801
|
3.0
|
34.0
|
1.0
|
C4A
|
A:HEM801
|
3.1
|
31.7
|
1.0
|
C1B
|
A:HEM801
|
3.1
|
32.8
|
1.0
|
CE1
|
A:HIS26
|
3.1
|
31.4
|
1.0
|
C4B
|
A:HEM801
|
3.1
|
35.1
|
1.0
|
CE1
|
A:HIS4
|
3.2
|
33.4
|
1.0
|
CHA
|
A:HEM801
|
3.3
|
32.4
|
1.0
|
CHD
|
A:HEM801
|
3.4
|
27.7
|
1.0
|
CHB
|
A:HEM801
|
3.4
|
25.7
|
1.0
|
CHC
|
A:HEM801
|
3.5
|
29.3
|
1.0
|
ND1
|
A:HIS26
|
4.2
|
27.7
|
1.0
|
CG
|
A:HIS26
|
4.2
|
31.1
|
1.0
|
CG
|
A:HIS4
|
4.2
|
35.5
|
1.0
|
C2A
|
A:HEM801
|
4.2
|
34.3
|
1.0
|
C3C
|
A:HEM801
|
4.2
|
35.1
|
1.0
|
C3D
|
A:HEM801
|
4.2
|
29.0
|
1.0
|
C2C
|
A:HEM801
|
4.2
|
31.0
|
1.0
|
ND1
|
A:HIS4
|
4.2
|
33.4
|
1.0
|
C3A
|
A:HEM801
|
4.2
|
32.1
|
1.0
|
C2D
|
A:HEM801
|
4.3
|
34.8
|
1.0
|
C3B
|
A:HEM801
|
4.3
|
33.9
|
1.0
|
C2B
|
A:HEM801
|
4.3
|
36.1
|
1.0
|
|
Iron binding site 2 out
of 8 in 1sp3
Go back to
Iron Binding Sites List in 1sp3
Iron binding site 2 out
of 8 in the Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe802
b:38.5
occ:1.00
|
FE
|
A:HEM802
|
0.0
|
38.5
|
1.0
|
NB
|
A:HEM802
|
2.0
|
31.9
|
1.0
|
ND
|
A:HEM802
|
2.1
|
32.7
|
1.0
|
NA
|
A:HEM802
|
2.1
|
34.6
|
1.0
|
NC
|
A:HEM802
|
2.1
|
35.0
|
1.0
|
NZ
|
A:LYS56
|
2.2
|
26.0
|
1.0
|
S
|
A:SCN810
|
2.4
|
39.4
|
1.0
|
CE
|
A:LYS56
|
2.9
|
27.4
|
1.0
|
C4B
|
A:HEM802
|
3.1
|
31.8
|
1.0
|
C1D
|
A:HEM802
|
3.1
|
27.4
|
1.0
|
C1B
|
A:HEM802
|
3.1
|
31.5
|
1.0
|
C4C
|
A:HEM802
|
3.1
|
32.9
|
1.0
|
C1C
|
A:HEM802
|
3.1
|
32.7
|
1.0
|
C4A
|
A:HEM802
|
3.1
|
32.9
|
1.0
|
C4D
|
A:HEM802
|
3.2
|
30.3
|
1.0
|
C1A
|
A:HEM802
|
3.2
|
35.8
|
1.0
|
C
|
A:SCN810
|
3.3
|
42.5
|
1.0
|
CHD
|
A:HEM802
|
3.4
|
29.9
|
1.0
|
CHC
|
A:HEM802
|
3.4
|
35.1
|
1.0
|
CHB
|
A:HEM802
|
3.5
|
29.6
|
1.0
|
CHA
|
A:HEM802
|
3.5
|
34.6
|
1.0
|
CD
|
A:LYS56
|
3.8
|
30.0
|
1.0
|
N
|
A:SCN810
|
4.2
|
41.3
|
1.0
|
C3B
|
A:HEM802
|
4.3
|
31.4
|
1.0
|
C2B
|
A:HEM802
|
4.3
|
30.8
|
1.0
|
C2D
|
A:HEM802
|
4.3
|
29.6
|
1.0
|
C2C
|
A:HEM802
|
4.4
|
35.0
|
1.0
|
C3C
|
A:HEM802
|
4.4
|
35.4
|
1.0
|
C3D
|
A:HEM802
|
4.4
|
31.7
|
1.0
|
C2A
|
A:HEM802
|
4.4
|
33.9
|
1.0
|
C3A
|
A:HEM802
|
4.4
|
32.4
|
1.0
|
CG
|
A:LYS56
|
4.8
|
29.9
|
1.0
|
O
|
A:HOH1207
|
5.0
|
62.3
|
1.0
|
|
Iron binding site 3 out
of 8 in 1sp3
Go back to
Iron Binding Sites List in 1sp3
Iron binding site 3 out
of 8 in the Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe803
b:33.0
occ:1.00
|
FE
|
A:HEM803
|
0.0
|
33.0
|
1.0
|
NB
|
A:HEM803
|
1.9
|
29.5
|
1.0
|
NE2
|
A:HIS102
|
2.0
|
30.4
|
1.0
|
NE2
|
A:HIS190
|
2.0
|
27.4
|
1.0
|
ND
|
A:HEM803
|
2.0
|
31.8
|
1.0
|
NA
|
A:HEM803
|
2.1
|
28.1
|
1.0
|
NC
|
A:HEM803
|
2.1
|
30.0
|
1.0
|
CE1
|
A:HIS102
|
2.8
|
27.3
|
1.0
|
C4B
|
A:HEM803
|
2.9
|
30.0
|
1.0
|
C1B
|
A:HEM803
|
2.9
|
28.7
|
1.0
|
CE1
|
A:HIS190
|
2.9
|
29.1
|
1.0
|
C1D
|
A:HEM803
|
3.0
|
29.9
|
1.0
|
CD2
|
A:HIS190
|
3.0
|
23.8
|
1.0
|
C4D
|
A:HEM803
|
3.0
|
32.4
|
1.0
|
CD2
|
A:HIS102
|
3.1
|
26.8
|
1.0
|
C4C
|
A:HEM803
|
3.1
|
26.8
|
1.0
|
C4A
|
A:HEM803
|
3.1
|
28.6
|
1.0
|
C1A
|
A:HEM803
|
3.1
|
30.3
|
1.0
|
C1C
|
A:HEM803
|
3.1
|
27.0
|
1.0
|
CHD
|
A:HEM803
|
3.4
|
23.4
|
1.0
|
CHC
|
A:HEM803
|
3.4
|
26.4
|
1.0
|
CHB
|
A:HEM803
|
3.4
|
24.2
|
1.0
|
CHA
|
A:HEM803
|
3.4
|
28.7
|
1.0
|
ND1
|
A:HIS102
|
4.0
|
27.9
|
1.0
|
ND1
|
A:HIS190
|
4.1
|
24.3
|
1.0
|
C3B
|
A:HEM803
|
4.1
|
29.1
|
1.0
|
CG
|
A:HIS190
|
4.1
|
25.9
|
1.0
|
C2B
|
A:HEM803
|
4.1
|
27.5
|
1.0
|
CG
|
A:HIS102
|
4.1
|
28.1
|
1.0
|
C3D
|
A:HEM803
|
4.2
|
28.1
|
1.0
|
C2D
|
A:HEM803
|
4.2
|
27.9
|
1.0
|
C2C
|
A:HEM803
|
4.3
|
30.4
|
1.0
|
C3C
|
A:HEM803
|
4.4
|
29.7
|
1.0
|
C2A
|
A:HEM803
|
4.4
|
31.9
|
1.0
|
C3A
|
A:HEM803
|
4.4
|
28.7
|
1.0
|
CMA
|
A:HEM801
|
5.0
|
33.6
|
1.0
|
|
Iron binding site 4 out
of 8 in 1sp3
Go back to
Iron Binding Sites List in 1sp3
Iron binding site 4 out
of 8 in the Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe804
b:30.6
occ:1.00
|
FE
|
A:HEM804
|
0.0
|
30.6
|
1.0
|
NC
|
A:HEM804
|
2.0
|
25.4
|
1.0
|
NE2
|
A:HIS38
|
2.0
|
29.1
|
1.0
|
NA
|
A:HEM804
|
2.0
|
24.6
|
1.0
|
NB
|
A:HEM804
|
2.0
|
23.3
|
1.0
|
NE2
|
A:HIS143
|
2.1
|
27.4
|
1.0
|
ND
|
A:HEM804
|
2.1
|
26.3
|
1.0
|
CE1
|
A:HIS38
|
2.9
|
34.0
|
1.0
|
C4C
|
A:HEM804
|
3.0
|
25.6
|
1.0
|
CE1
|
A:HIS143
|
3.0
|
20.5
|
1.0
|
C1C
|
A:HEM804
|
3.0
|
23.9
|
1.0
|
C1A
|
A:HEM804
|
3.0
|
24.1
|
1.0
|
C4B
|
A:HEM804
|
3.0
|
23.4
|
1.0
|
C1B
|
A:HEM804
|
3.0
|
21.1
|
1.0
|
C4D
|
A:HEM804
|
3.1
|
28.6
|
1.0
|
CD2
|
A:HIS38
|
3.1
|
29.3
|
1.0
|
CD2
|
A:HIS143
|
3.1
|
21.9
|
1.0
|
C4A
|
A:HEM804
|
3.1
|
23.4
|
1.0
|
C1D
|
A:HEM804
|
3.1
|
23.9
|
1.0
|
CHA
|
A:HEM804
|
3.4
|
23.7
|
1.0
|
CHC
|
A:HEM804
|
3.4
|
23.0
|
1.0
|
CHB
|
A:HEM804
|
3.4
|
22.7
|
1.0
|
CHD
|
A:HEM804
|
3.4
|
22.9
|
1.0
|
ND1
|
A:HIS38
|
4.1
|
29.3
|
1.0
|
ND1
|
A:HIS143
|
4.1
|
25.5
|
1.0
|
CG
|
A:HIS38
|
4.2
|
30.2
|
1.0
|
C3C
|
A:HEM804
|
4.2
|
22.4
|
1.0
|
CG
|
A:HIS143
|
4.2
|
28.4
|
1.0
|
C2C
|
A:HEM804
|
4.2
|
22.3
|
1.0
|
C2B
|
A:HEM804
|
4.3
|
23.1
|
1.0
|
C2A
|
A:HEM804
|
4.3
|
24.5
|
1.0
|
C3B
|
A:HEM804
|
4.3
|
24.7
|
1.0
|
C3A
|
A:HEM804
|
4.3
|
25.5
|
1.0
|
C3D
|
A:HEM804
|
4.3
|
27.8
|
1.0
|
C2D
|
A:HEM804
|
4.3
|
24.6
|
1.0
|
|
Iron binding site 5 out
of 8 in 1sp3
Go back to
Iron Binding Sites List in 1sp3
Iron binding site 5 out
of 8 in the Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe805
b:30.0
occ:1.00
|
FE
|
A:HEM805
|
0.0
|
30.0
|
1.0
|
NB
|
A:HEM805
|
2.0
|
24.9
|
1.0
|
NE2
|
A:HIS185
|
2.0
|
22.1
|
1.0
|
ND
|
A:HEM805
|
2.0
|
23.4
|
1.0
|
NA
|
A:HEM805
|
2.1
|
25.8
|
1.0
|
NE2
|
A:HIS400
|
2.1
|
24.6
|
1.0
|
NC
|
A:HEM805
|
2.1
|
25.4
|
1.0
|
CE1
|
A:HIS185
|
2.9
|
21.7
|
1.0
|
C1B
|
A:HEM805
|
3.0
|
27.0
|
1.0
|
CE1
|
A:HIS400
|
3.0
|
24.3
|
1.0
|
C4C
|
A:HEM805
|
3.0
|
23.6
|
1.0
|
C4A
|
A:HEM805
|
3.0
|
23.5
|
1.0
|
C1A
|
A:HEM805
|
3.1
|
26.9
|
1.0
|
C4B
|
A:HEM805
|
3.1
|
25.3
|
1.0
|
C4D
|
A:HEM805
|
3.1
|
28.6
|
1.0
|
CD2
|
A:HIS185
|
3.1
|
19.8
|
1.0
|
C1D
|
A:HEM805
|
3.1
|
24.4
|
1.0
|
C1C
|
A:HEM805
|
3.1
|
24.4
|
1.0
|
CD2
|
A:HIS400
|
3.1
|
26.4
|
1.0
|
CHB
|
A:HEM805
|
3.4
|
21.8
|
1.0
|
CHD
|
A:HEM805
|
3.4
|
26.4
|
1.0
|
CHA
|
A:HEM805
|
3.4
|
26.9
|
1.0
|
CHC
|
A:HEM805
|
3.5
|
23.7
|
1.0
|
ND1
|
A:HIS185
|
4.1
|
26.0
|
1.0
|
ND1
|
A:HIS400
|
4.1
|
25.6
|
1.0
|
CG
|
A:HIS185
|
4.2
|
26.3
|
1.0
|
C2B
|
A:HEM805
|
4.2
|
24.0
|
1.0
|
CG
|
A:HIS400
|
4.2
|
25.9
|
1.0
|
C3C
|
A:HEM805
|
4.2
|
22.1
|
1.0
|
C3B
|
A:HEM805
|
4.2
|
26.5
|
1.0
|
C3A
|
A:HEM805
|
4.3
|
27.7
|
1.0
|
C2A
|
A:HEM805
|
4.3
|
29.9
|
1.0
|
C2C
|
A:HEM805
|
4.3
|
27.2
|
1.0
|
C3D
|
A:HEM805
|
4.3
|
23.8
|
1.0
|
C2D
|
A:HEM805
|
4.3
|
17.1
|
1.0
|
|
Iron binding site 6 out
of 8 in 1sp3
Go back to
Iron Binding Sites List in 1sp3
Iron binding site 6 out
of 8 in the Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe806
b:32.2
occ:1.00
|
FE
|
A:HEM806
|
0.0
|
32.2
|
1.0
|
NE2
|
A:HIS171
|
1.9
|
25.2
|
1.0
|
NC
|
A:HEM806
|
2.0
|
26.8
|
1.0
|
NA
|
A:HEM806
|
2.0
|
27.3
|
1.0
|
NE2
|
A:HIS213
|
2.0
|
27.2
|
1.0
|
ND
|
A:HEM806
|
2.1
|
31.1
|
1.0
|
NB
|
A:HEM806
|
2.1
|
27.6
|
1.0
|
CD2
|
A:HIS171
|
2.9
|
22.3
|
1.0
|
CE1
|
A:HIS213
|
3.0
|
30.5
|
1.0
|
CE1
|
A:HIS171
|
3.0
|
25.0
|
1.0
|
C4C
|
A:HEM806
|
3.0
|
29.3
|
1.0
|
C1A
|
A:HEM806
|
3.0
|
35.0
|
1.0
|
C1C
|
A:HEM806
|
3.0
|
28.1
|
1.0
|
C4D
|
A:HEM806
|
3.0
|
32.5
|
1.0
|
C4A
|
A:HEM806
|
3.0
|
30.5
|
1.0
|
C4B
|
A:HEM806
|
3.1
|
27.5
|
1.0
|
C1B
|
A:HEM806
|
3.1
|
23.6
|
1.0
|
C1D
|
A:HEM806
|
3.1
|
31.5
|
1.0
|
CD2
|
A:HIS213
|
3.1
|
28.8
|
1.0
|
CHD
|
A:HEM806
|
3.4
|
27.6
|
1.0
|
CHA
|
A:HEM806
|
3.4
|
35.1
|
1.0
|
CHC
|
A:HEM806
|
3.4
|
26.6
|
1.0
|
CHB
|
A:HEM806
|
3.4
|
24.8
|
1.0
|
CG
|
A:HIS171
|
4.0
|
23.6
|
1.0
|
ND1
|
A:HIS171
|
4.0
|
21.8
|
1.0
|
ND1
|
A:HIS213
|
4.1
|
30.7
|
1.0
|
CG
|
A:HIS213
|
4.2
|
32.0
|
1.0
|
C3C
|
A:HEM806
|
4.2
|
29.3
|
1.0
|
C2A
|
A:HEM806
|
4.2
|
34.5
|
1.0
|
C2C
|
A:HEM806
|
4.2
|
27.8
|
1.0
|
C3A
|
A:HEM806
|
4.2
|
29.3
|
1.0
|
C2B
|
A:HEM806
|
4.3
|
25.8
|
1.0
|
C3B
|
A:HEM806
|
4.3
|
27.2
|
1.0
|
C3D
|
A:HEM806
|
4.3
|
35.8
|
1.0
|
C2D
|
A:HEM806
|
4.3
|
31.6
|
1.0
|
|
Iron binding site 7 out
of 8 in 1sp3
Go back to
Iron Binding Sites List in 1sp3
Iron binding site 7 out
of 8 in the Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe807
b:32.2
occ:1.00
|
FE
|
A:HEM807
|
0.0
|
32.2
|
1.0
|
ND
|
A:HEM807
|
2.0
|
28.3
|
1.0
|
NE2
|
A:HIS236
|
2.0
|
30.3
|
1.0
|
NA
|
A:HEM807
|
2.0
|
32.1
|
1.0
|
NB
|
A:HEM807
|
2.0
|
27.1
|
1.0
|
NE2
|
A:HIS218
|
2.1
|
25.7
|
1.0
|
NC
|
A:HEM807
|
2.1
|
27.3
|
1.0
|
CE1
|
A:HIS236
|
2.7
|
29.7
|
1.0
|
C4D
|
A:HEM807
|
2.9
|
28.8
|
1.0
|
C1A
|
A:HEM807
|
3.0
|
29.8
|
1.0
|
CD2
|
A:HIS218
|
3.0
|
25.7
|
1.0
|
C1D
|
A:HEM807
|
3.0
|
26.4
|
1.0
|
C1B
|
A:HEM807
|
3.0
|
25.6
|
1.0
|
C4C
|
A:HEM807
|
3.0
|
25.3
|
1.0
|
C4A
|
A:HEM807
|
3.1
|
27.9
|
1.0
|
C4B
|
A:HEM807
|
3.1
|
27.6
|
1.0
|
CE1
|
A:HIS218
|
3.1
|
28.3
|
1.0
|
C1C
|
A:HEM807
|
3.1
|
23.3
|
1.0
|
CD2
|
A:HIS236
|
3.2
|
29.9
|
1.0
|
CHA
|
A:HEM807
|
3.2
|
27.2
|
1.0
|
CHD
|
A:HEM807
|
3.4
|
19.5
|
1.0
|
CHB
|
A:HEM807
|
3.4
|
23.7
|
1.0
|
CHC
|
A:HEM807
|
3.5
|
22.9
|
1.0
|
ND1
|
A:HIS236
|
3.9
|
28.4
|
1.0
|
C3D
|
A:HEM807
|
4.2
|
26.4
|
1.0
|
CG
|
A:HIS218
|
4.2
|
30.7
|
1.0
|
CG
|
A:HIS236
|
4.2
|
29.1
|
1.0
|
C2A
|
A:HEM807
|
4.2
|
30.2
|
1.0
|
ND1
|
A:HIS218
|
4.2
|
25.0
|
1.0
|
C2B
|
A:HEM807
|
4.2
|
26.6
|
1.0
|
C2D
|
A:HEM807
|
4.2
|
21.6
|
1.0
|
C3B
|
A:HEM807
|
4.3
|
23.1
|
1.0
|
C3A
|
A:HEM807
|
4.3
|
27.8
|
1.0
|
C3C
|
A:HEM807
|
4.3
|
27.8
|
1.0
|
C2C
|
A:HEM807
|
4.3
|
27.4
|
1.0
|
CG
|
A:PRO217
|
4.6
|
30.3
|
1.0
|
|
Iron binding site 8 out
of 8 in 1sp3
Go back to
Iron Binding Sites List in 1sp3
Iron binding site 8 out
of 8 in the Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Crystal Structure of Octaheme Cytochrome C From Shewanella Oneidensis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe808
b:31.3
occ:1.00
|
FE
|
A:HEM808
|
0.0
|
31.3
|
1.0
|
NE2
|
A:HIS226
|
2.0
|
30.5
|
1.0
|
NC
|
A:HEM808
|
2.0
|
27.1
|
1.0
|
ND
|
A:HEM808
|
2.0
|
27.3
|
1.0
|
NA
|
A:HEM808
|
2.1
|
31.8
|
1.0
|
NE2
|
A:HIS415
|
2.1
|
28.6
|
1.0
|
NB
|
A:HEM808
|
2.1
|
31.0
|
1.0
|
CD2
|
A:HIS226
|
2.9
|
26.9
|
1.0
|
C4C
|
A:HEM808
|
3.0
|
25.8
|
1.0
|
CE1
|
A:HIS226
|
3.0
|
32.9
|
1.0
|
C1D
|
A:HEM808
|
3.0
|
25.0
|
1.0
|
CD2
|
A:HIS415
|
3.0
|
23.1
|
1.0
|
C4D
|
A:HEM808
|
3.0
|
29.5
|
1.0
|
C1B
|
A:HEM808
|
3.0
|
28.6
|
1.0
|
C4A
|
A:HEM808
|
3.1
|
30.1
|
1.0
|
CE1
|
A:HIS415
|
3.1
|
28.4
|
1.0
|
C1C
|
A:HEM808
|
3.1
|
28.3
|
1.0
|
C1A
|
A:HEM808
|
3.1
|
29.4
|
1.0
|
C4B
|
A:HEM808
|
3.1
|
27.8
|
1.0
|
CHD
|
A:HEM808
|
3.3
|
21.0
|
1.0
|
CHB
|
A:HEM808
|
3.4
|
31.4
|
1.0
|
CHA
|
A:HEM808
|
3.4
|
29.1
|
1.0
|
CHC
|
A:HEM808
|
3.4
|
28.5
|
1.0
|
ND1
|
A:HIS226
|
4.1
|
32.1
|
1.0
|
CG
|
A:HIS226
|
4.1
|
29.5
|
1.0
|
ND1
|
A:HIS415
|
4.1
|
27.4
|
1.0
|
CG
|
A:HIS415
|
4.2
|
27.8
|
1.0
|
C2D
|
A:HEM808
|
4.2
|
22.9
|
1.0
|
C3D
|
A:HEM808
|
4.2
|
25.2
|
1.0
|
C3C
|
A:HEM808
|
4.2
|
24.1
|
1.0
|
C2C
|
A:HEM808
|
4.3
|
24.7
|
1.0
|
C2B
|
A:HEM808
|
4.3
|
33.5
|
1.0
|
C3B
|
A:HEM808
|
4.3
|
25.7
|
1.0
|
C3A
|
A:HEM808
|
4.3
|
30.7
|
1.0
|
C2A
|
A:HEM808
|
4.3
|
34.5
|
1.0
|
O
|
A:HOH1265
|
4.9
|
45.3
|
1.0
|
|
Reference:
C.G.Mowat,
E.Rothery,
C.S.Miles,
L.Mciver,
M.K.Doherty,
K.Drewette,
P.Taylor,
M.D.Walkinshaw,
S.K.Chapman,
G.A.Reid.
Octaheme Tetrathionate Reductase Is A Respiratory Enzyme with Novel Heme Ligation. Nat.Struct.Mol.Biol. V. 11 1023 2004.
ISSN: ISSN 1545-9993
PubMed: 15361860
DOI: 10.1038/NSMB827
Page generated: Sat Aug 3 14:47:20 2024
|