Iron in PDB 1v75: Crystal Structure of Hemoglobin D From the Aldabra Giant Tortoise (Geochelone Gigantea) at 2.0 A Resolution

The structure of Crystal Structure of Hemoglobin D From the Aldabra Giant Tortoise (Geochelone Gigantea) at 2.0 A Resolution, PDB code: 1v75 was solved by T.Kuwada, T.Hasegawa, I.Satoh, K.Ishikawa, F.Shishikura, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.96 / 2.02
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	112.142, 62.374, 53.980, 90.00, 110.26, 90.00
R / Rfree (%)	n/a / n/a

The binding sites of Iron atom in the Crystal Structure of Hemoglobin D From the Aldabra Giant Tortoise (Geochelone Gigantea) at 2.0 A Resolution (pdb code 1v75). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of Hemoglobin D From the Aldabra Giant Tortoise (Geochelone Gigantea) at 2.0 A Resolution, PDB code: 1v75:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Crystal Structure of Hemoglobin D From the Aldabra Giant Tortoise (Geochelone Gigantea) at 2.0 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Hemoglobin D From the Aldabra Giant Tortoise (Geochelone Gigantea) at 2.0 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe201 b:24.6 occ:1.00 FE A:HEM201 0.0 24.6 1.0 NB A:HEM201 2.0 25.2 1.0 NC A:HEM201 2.1 23.2 1.0 NA A:HEM201 2.1 29.4 1.0 ND A:HEM201 2.1 24.9 1.0 O A:HOH451 2.2 20.1 1.0 NE2 A:HIS87 2.2 22.5 1.0 C4B A:HEM201 3.0 25.1 1.0 C1C A:HEM201 3.0 22.8 1.0 C1A A:HEM201 3.1 29.3 1.0 C1B A:HEM201 3.1 26.9 1.0 C4D A:HEM201 3.1 24.4 1.0 C4A A:HEM201 3.1 30.3 1.0 C4C A:HEM201 3.1 21.9 1.0 C1D A:HEM201 3.1 23.5 1.0 CE1 A:HIS87 3.2 25.1 1.0 CD2 A:HIS87 3.2 22.4 1.0 CHC A:HEM201 3.4 21.2 1.0 CHA A:HEM201 3.4 26.2 1.0 CHB A:HEM201 3.5 27.3 1.0 CHD A:HEM201 3.5 22.2 1.0 C3B A:HEM201 4.3 26.0 1.0 NE2 A:HIS58 4.3 21.0 1.0 C2B A:HEM201 4.3 27.8 1.0 C2C A:HEM201 4.3 20.8 1.0 C2A A:HEM201 4.3 29.9 1.0 C3C A:HEM201 4.3 22.6 1.0 C3D A:HEM201 4.3 22.8 1.0 ND1 A:HIS87 4.3 23.9 1.0 C3A A:HEM201 4.3 30.5 1.0 C2D A:HEM201 4.3 22.0 1.0 CG A:HIS87 4.4 22.8 1.0 CE1 A:HIS58 4.4 24.1 1.0

Iron binding site 2 out of 2 in the Crystal Structure of Hemoglobin D From the Aldabra Giant Tortoise (Geochelone Gigantea) at 2.0 A Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of Hemoglobin D From the Aldabra Giant Tortoise (Geochelone Gigantea) at 2.0 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe201 b:31.3 occ:1.00 FE B:HEM201 0.0 31.3 1.0 O B:HOH363 2.0 25.3 1.0 NB B:HEM201 2.0 30.8 1.0 NC B:HEM201 2.1 32.1 1.0 NA B:HEM201 2.1 34.0 1.0 ND B:HEM201 2.1 35.7 1.0 NE2 B:HIS92 2.2 32.1 1.0 C4B B:HEM201 3.0 31.1 1.0 C1C B:HEM201 3.0 31.1 1.0 C1B B:HEM201 3.0 33.8 1.0 C1A B:HEM201 3.1 35.5 1.0 C4D B:HEM201 3.1 36.8 1.0 C4A B:HEM201 3.1 34.3 1.0 CD2 B:HIS92 3.1 33.3 1.0 C4C B:HEM201 3.1 33.6 1.0 C1D B:HEM201 3.1 35.9 1.0 CE1 B:HIS92 3.3 32.1 1.0 CHC B:HEM201 3.4 30.5 1.0 CHA B:HEM201 3.4 35.3 1.0 CHB B:HEM201 3.5 33.0 1.0 CHD B:HEM201 3.5 34.7 1.0 C3B B:HEM201 4.3 32.3 1.0 NE2 B:HIS63 4.3 29.3 1.0 C2B B:HEM201 4.3 33.5 1.0 C2C B:HEM201 4.3 31.2 1.0 C2A B:HEM201 4.3 35.8 1.0 CG B:HIS92 4.3 33.9 1.0 C3C B:HEM201 4.3 33.9 1.0 C3A B:HEM201 4.3 35.3 1.0 C3D B:HEM201 4.3 37.5 1.0 C2D B:HEM201 4.3 36.5 1.0 ND1 B:HIS92 4.4 31.9 1.0 CG2 B:VAL67 4.5 20.3 1.0 CE1 B:HIS63 4.5 28.4 1.0

T.Kuwada, T.Hasegawa, I.Satoh, K.Ishikawa, F.Shishikura. Crystallization and Preliminary X-Ray Diffraction Study of Hemoglobin D From the Aldabra Giant Tortoise, Geochelone Gigantea. Protein Pept.Lett. V. 10 422 2003.
ISSN: ISSN 0929-8665
PubMed: 14529497
DOI: 10.2174/0929866033478799