Atomistry » Iron » PDB 2aiu-2axx » 2anz
Atomistry »
  Iron »
    PDB 2aiu-2axx »
      2anz »

Iron in PDB 2anz: Cytochrome C Peroxidase in Complex with 2,6-Diaminopyridine

Enzymatic activity of Cytochrome C Peroxidase in Complex with 2,6-Diaminopyridine

All present enzymatic activity of Cytochrome C Peroxidase in Complex with 2,6-Diaminopyridine:
1.11.1.5;

Protein crystallography data

The structure of Cytochrome C Peroxidase in Complex with 2,6-Diaminopyridine, PDB code: 2anz was solved by R.Brenk, S.W.Vetter, S.E.Boyce, D.B.Goodin, B.K.Shoichet, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.33 / 1.75
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 50.840, 76.170, 107.080, 90.00, 90.00, 90.00
R / Rfree (%) 19.2 / 21

Iron Binding Sites:

The binding sites of Iron atom in the Cytochrome C Peroxidase in Complex with 2,6-Diaminopyridine (pdb code 2anz). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Cytochrome C Peroxidase in Complex with 2,6-Diaminopyridine, PDB code: 2anz:

Iron binding site 1 out of 1 in 2anz

Go back to Iron Binding Sites List in 2anz
Iron binding site 1 out of 1 in the Cytochrome C Peroxidase in Complex with 2,6-Diaminopyridine


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome C Peroxidase in Complex with 2,6-Diaminopyridine within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe400

b:14.7
occ:1.00
FE A:HEM400 0.0 14.7 1.0
NC A:HEM400 2.0 11.7 1.0
NA A:HEM400 2.0 12.6 1.0
NB A:HEM400 2.0 11.7 1.0
ND A:HEM400 2.1 12.1 1.0
NE2 A:HIS175 2.2 13.8 1.0
O A:HOH1415 2.2 16.6 1.0
CD2 A:HIS175 3.0 11.7 1.0
C4C A:HEM400 3.0 12.9 1.0
C1C A:HEM400 3.0 12.3 1.0
C1D A:HEM400 3.0 12.0 1.0
C1A A:HEM400 3.0 13.1 1.0
C4B A:HEM400 3.0 12.5 1.0
C4A A:HEM400 3.1 13.1 1.0
C1B A:HEM400 3.1 12.5 1.0
C4D A:HEM400 3.1 12.8 1.0
CE1 A:HIS175 3.3 13.9 1.0
CHD A:HEM400 3.4 12.1 1.0
CHC A:HEM400 3.4 11.6 1.0
CHA A:HEM400 3.5 12.7 1.0
CHB A:HEM400 3.5 11.2 1.0
NE1 A:TRP51 4.1 12.2 1.0
NE A:ARG48 4.2 21.2 1.0
CG A:HIS175 4.2 12.4 1.0
C2C A:HEM400 4.2 11.5 1.0
C3A A:HEM400 4.3 13.7 1.0
C2A A:HEM400 4.3 13.6 1.0
O A:HOH1200 4.3 16.2 1.0
C3C A:HEM400 4.3 13.6 1.0
C2D A:HEM400 4.3 14.2 1.0
C3B A:HEM400 4.3 12.2 1.0
ND1 A:HIS175 4.3 12.6 1.0
C3D A:HEM400 4.3 12.5 1.0
C2B A:HEM400 4.3 11.7 1.0
CD1 A:TRP51 4.6 12.9 1.0
C6 A:26D500 4.6 14.5 1.0
NH2 A:ARG48 4.7 18.0 1.0
CZ A:ARG48 4.9 21.4 1.0
CG A:ARG48 5.0 16.0 1.0
CD A:ARG48 5.0 18.8 1.0

Reference:

R.Brenk, S.W.Vetter, S.E.Boyce, D.B.Goodin, B.K.Shoichet. Probing Molecular Docking in A Charged Model Binding Site. J.Mol.Biol. V. 357 1449 2006.
ISSN: ISSN 0022-2836
PubMed: 16490206
DOI: 10.1016/J.JMB.2006.01.034
Page generated: Sat Aug 3 19:20:57 2024

Last articles

Zn in 9J0N
Zn in 9J0O
Zn in 9J0P
Zn in 9FJX
Zn in 9EKB
Zn in 9C0F
Zn in 9CAH
Zn in 9CH0
Zn in 9CH3
Zn in 9CH1
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy