Iron in PDB 3vxi: Dye-Decolorizing Peroxidase (Dyp) Complex with Ascorbic Acid

All present enzymatic activity of Dye-Decolorizing Peroxidase (Dyp) Complex with Ascorbic Acid:
1.11.1.19;

The structure of Dye-Decolorizing Peroxidase (Dyp) Complex with Ascorbic Acid, PDB code: 3vxi was solved by Y.Sugano, T.Yoshida, H.Tsuge, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.88 / 1.50
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	46.892, 95.912, 50.333, 90.00, 103.81, 90.00
R / Rfree (%)	17.3 / 19.3

The binding sites of Iron atom in the Dye-Decolorizing Peroxidase (Dyp) Complex with Ascorbic Acid (pdb code 3vxi). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Dye-Decolorizing Peroxidase (Dyp) Complex with Ascorbic Acid, PDB code: 3vxi:

Iron binding site 1 out of 1 in the Dye-Decolorizing Peroxidase (Dyp) Complex with Ascorbic Acid


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Dye-Decolorizing Peroxidase (Dyp) Complex with Ascorbic Acid within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe501 b:5.1 occ:1.00 FE A:HEM501 0.0 5.1 1.0 NA A:HEM501 2.0 4.8 1.0 NB A:HEM501 2.0 5.2 1.0 NC A:HEM501 2.0 5.5 1.0 ND A:HEM501 2.0 4.4 1.0 O A:HOH830 2.1 5.2 1.0 NE2 A:HIS308 2.2 6.2 1.0 C4A A:HEM501 3.0 4.1 1.0 C1A A:HEM501 3.0 3.4 1.0 C1C A:HEM501 3.1 4.5 1.0 C4B A:HEM501 3.1 3.7 1.0 C4D A:HEM501 3.1 4.1 1.0 C1B A:HEM501 3.1 4.5 1.0 C4C A:HEM501 3.1 4.9 1.0 C1D A:HEM501 3.1 4.6 1.0 CE1 A:HIS308 3.1 5.3 1.0 CD2 A:HIS308 3.2 6.1 1.0 CHA A:HEM501 3.4 4.3 1.0 CHB A:HEM501 3.4 4.8 1.0 CHC A:HEM501 3.4 5.3 1.0 CHD A:HEM501 3.4 5.5 1.0 O A:HOH831 4.2 10.5 1.0 ND1 A:HIS308 4.2 5.8 1.0 C3A A:HEM501 4.2 4.4 1.0 NH1 A:ARG329 4.3 7.4 1.0 C2A A:HEM501 4.3 4.4 1.0 C3B A:HEM501 4.3 4.2 1.0 C2C A:HEM501 4.3 5.1 1.0 C2B A:HEM501 4.3 4.6 1.0 C3C A:HEM501 4.3 5.1 1.0 CG A:HIS308 4.3 5.7 1.0 C3D A:HEM501 4.3 5.3 1.0 C2D A:HEM501 4.3 5.2 1.0 CE1 A:PHE356 4.9 6.8 1.0 CD A:ARG329 4.9 7.7 1.0

Y.Sugano, T.Yoshida, H.Tsuge. Dye-Decolorizing Peroxidase (Dyp) Complex with Ascorbic Acid To Be Published.