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Iron in PDB 4b2o: Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses.
Protein crystallography data
The structure of Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses., PDB code: 4b2o
was solved by
J.A.Newman,
C.Diethmaier,
A.T.Kovacs,
C.Rodrigues,
O.P.Kuipers,
J.Stulke,
R.J.Lewis,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 19.738 / 1.64 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 73.855, 105.997, 77.920, 90.00, 108.30, 90.00 |
| R / Rfree (%) | 15.89 / 18.54 |
Iron Binding Sites:
The binding sites of Iron atom in the Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses.
(pdb code 4b2o). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses., PDB code: 4b2o:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Iron where determined in the Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses., PDB code: 4b2o:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Iron binding site 1 out of 8 in 4b2o
Go back to
Iron Binding Sites List in 4b2o
Iron binding site 1 out
of 8 in the Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses. within 5.0Å range:
|
Iron binding site 2 out of 8 in 4b2o
Go back to
Iron Binding Sites List in 4b2o
Iron binding site 2 out
of 8 in the Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses. within 5.0Å range:
|
Iron binding site 3 out of 8 in 4b2o
Go back to
Iron Binding Sites List in 4b2o
Iron binding site 3 out
of 8 in the Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses. within 5.0Å range:
|
Iron binding site 4 out of 8 in 4b2o
Go back to
Iron Binding Sites List in 4b2o
Iron binding site 4 out
of 8 in the Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses. within 5.0Å range:
|
Iron binding site 5 out of 8 in 4b2o
Go back to
Iron Binding Sites List in 4b2o
Iron binding site 5 out
of 8 in the Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses. within 5.0Å range:
|
Iron binding site 6 out of 8 in 4b2o
Go back to
Iron Binding Sites List in 4b2o
Iron binding site 6 out
of 8 in the Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses. within 5.0Å range:
|
Iron binding site 7 out of 8 in 4b2o
Go back to
Iron Binding Sites List in 4b2o
Iron binding site 7 out
of 8 in the Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses. within 5.0Å range:
|
Iron binding site 8 out of 8 in 4b2o
Go back to
Iron Binding Sites List in 4b2o
Iron binding site 8 out
of 8 in the Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses.
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Crystal Structure of Bacillus Subtilis Ymdb, A Global Regulator of Late Adaptive Responses. within 5.0Å range:
|
Reference:
C.Diethmaier,
J.A.Newman,
A.T.Kovacs,
V.Kaever,
C.Herzberg,
C.Rodrigues,
M.Boonstra,
O.P.Kuipers,
R.J.Lewis,
J.Stulke.
The Ymdb Phosphodiesterase Is A Global Regulator of Late Adaptive Responses in Bacillus Subtilis. J.Bacteriol. V. 196 265 2014.
ISSN: ISSN 0021-9193
PubMed: 24163345
DOI: 10.1128/JB.00826-13
Page generated: Sun Aug 4 23:50:06 2024
ISSN: ISSN 0021-9193
PubMed: 24163345
DOI: 10.1128/JB.00826-13
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