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Iron in PDB 4xdd: Apo [Fefe]-Hydrogenase Cpi

Enzymatic activity of Apo [Fefe]-Hydrogenase Cpi

All present enzymatic activity of Apo [Fefe]-Hydrogenase Cpi:
1.12.7.2;

Protein crystallography data

The structure of Apo [Fefe]-Hydrogenase Cpi, PDB code: 4xdd was solved by J.Esselborn, E.Hofmann, G.Kurisu, T.Happe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.96 / 1.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 90.057, 71.807, 103.308, 90.00, 97.93, 90.00
R / Rfree (%) 14.4 / 16.6

Other elements in 4xdd:

The structure of Apo [Fefe]-Hydrogenase Cpi also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms
Chlorine (Cl) 4 atoms

Iron Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 36;

Binding sites:

The binding sites of Iron atom in the Apo [Fefe]-Hydrogenase Cpi (pdb code 4xdd). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 36 binding sites of Iron where determined in the Apo [Fefe]-Hydrogenase Cpi, PDB code: 4xdd:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 36 in 4xdd

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Iron binding site 1 out of 36 in the Apo [Fefe]-Hydrogenase Cpi


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Apo [Fefe]-Hydrogenase Cpi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe601

b:18.9
occ:1.00
FE1 A:SF4601 0.0 18.9 1.0
S2 A:SF4601 2.2 19.2 1.0
SG A:CYS355 2.3 18.3 1.0
S4 A:SF4601 2.3 19.6 1.0
S3 A:SF4601 2.3 18.8 1.0
FE3 A:SF4601 2.7 18.6 1.0
FE4 A:SF4601 2.7 18.8 1.0
FE2 A:SF4601 2.7 18.6 1.0
HB2 A:CYS355 2.9 21.7 1.0
CB A:CYS355 3.2 18.1 1.0
HD2 A:PRO301 3.8 21.4 1.0
HB3 A:SER357 3.8 23.4 1.0
HB3 A:CYS355 3.8 21.7 1.0
O A:HOH886 3.8 16.8 1.0
S1 A:SF4601 3.9 19.2 1.0
HG2 A:LYS358 3.9 21.4 1.0
HG2 A:PRO301 4.0 26.2 1.0
HE2 A:LYS358 4.1 22.2 1.0
HA A:CYS355 4.2 20.4 1.0
CA A:CYS355 4.3 17.0 1.0
HB2 A:SER357 4.4 23.4 1.0
H A:SER357 4.4 19.7 1.0
H A:GLY302 4.5 21.6 1.0
CB A:SER357 4.5 19.5 1.0
CD A:PRO301 4.6 17.8 1.0
H A:LYS358 4.6 22.8 1.0
SG A:CYS503 4.7 19.0 1.0
CG A:PRO301 4.7 21.8 1.0
SG A:CYS300 4.8 18.9 1.0
SG A:CYS499 4.8 19.4 1.0
HA A:CYS300 4.8 22.0 1.0
CG A:LYS358 4.8 17.9 1.0
HA A:CYS503 4.9 21.0 1.0
HG3 A:LYS358 4.9 21.4 1.0
CE A:LYS358 4.9 18.5 1.0
HA A:CYS193 4.9 21.5 1.0
HE3 A:LYS358 4.9 22.2 1.0
HA3 A:GLY506 4.9 20.6 1.0
HG3 A:PRO301 5.0 26.2 1.0

Iron binding site 2 out of 36 in 4xdd

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Iron binding site 2 out of 36 in the Apo [Fefe]-Hydrogenase Cpi


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Apo [Fefe]-Hydrogenase Cpi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe601

b:18.6
occ:1.00
FE2 A:SF4601 0.0 18.6 1.0
S1 A:SF4601 2.3 19.2 1.0
SG A:CYS499 2.3 19.4 1.0
S4 A:SF4601 2.3 19.6 1.0
S3 A:SF4601 2.3 18.8 1.0
FE3 A:SF4601 2.7 18.6 1.0
FE1 A:SF4601 2.7 18.9 1.0
FE4 A:SF4601 2.7 18.8 1.0
HB2 A:CYS499 2.9 24.8 1.0
CB A:CYS499 3.2 20.7 1.0
H A:CYS499 3.3 22.1 1.0
HA2 A:GLY506 3.6 20.6 1.0
HB3 A:ALA498 3.7 25.0 1.0
N A:CYS499 3.7 18.5 1.0
HA A:CYS503 3.9 21.0 1.0
S2 A:SF4601 3.9 19.2 1.0
HB3 A:CYS499 3.9 24.8 1.0
CA A:CYS499 4.1 19.0 1.0
O A:HOH886 4.1 16.8 1.0
HA3 A:GLY506 4.2 20.6 1.0
HB2 A:CYS193 4.3 20.6 1.0
H A:ALA498 4.3 22.5 1.0
CA A:GLY506 4.4 17.2 1.0
H A:GLY507 4.5 22.4 1.0
SG A:CYS355 4.6 18.3 1.0
CB A:ALA498 4.6 20.8 1.0
HA A:CYS499 4.6 22.8 1.0
C A:ALA498 4.6 18.7 1.0
HB2 A:CYS355 4.7 21.7 1.0
SG A:CYS300 4.7 18.9 1.0
HA A:CYS193 4.8 21.5 1.0
CA A:CYS503 4.8 17.5 1.0
HE21 A:GLN195 4.8 23.5 1.0
N A:ALA498 4.8 18.8 1.0
SG A:CYS503 4.9 19.0 1.0
CA A:ALA498 4.9 18.6 1.0

Iron binding site 3 out of 36 in 4xdd

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Iron binding site 3 out of 36 in the Apo [Fefe]-Hydrogenase Cpi


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Apo [Fefe]-Hydrogenase Cpi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe601

b:18.6
occ:1.00
FE3 A:SF4601 0.0 18.6 1.0
S4 A:SF4601 2.2 19.6 1.0
SG A:CYS300 2.3 18.9 1.0
S2 A:SF4601 2.3 19.2 1.0
S1 A:SF4601 2.3 19.2 1.0
FE1 A:SF4601 2.7 18.9 1.0
FE4 A:SF4601 2.7 18.8 1.0
FE2 A:SF4601 2.7 18.6 1.0
H A:ALA498 3.3 22.5 1.0
HB2 A:CYS300 3.3 24.2 1.0
CB A:CYS300 3.3 20.2 1.0
HB3 A:ALA498 3.4 25.0 1.0
HA A:CYS300 3.5 22.0 1.0
H A:GLY302 3.5 21.6 1.0
HD2 A:PRO301 3.6 21.4 1.0
S3 A:SF4601 3.8 18.8 1.0
CA A:CYS300 3.9 18.3 1.0
H A:CYS499 4.0 22.1 1.0
N A:ALA498 4.1 18.8 1.0
HB3 A:CYS300 4.2 24.2 1.0
CB A:ALA498 4.2 20.8 1.0
HA3 A:GLY302 4.2 21.6 1.0
HB2 A:ALA498 4.3 25.0 1.0
HA A:MET497 4.3 22.4 1.0
N A:GLY302 4.4 18.0 1.0
C A:CYS300 4.4 17.8 1.0
H A:TRP303 4.4 22.9 1.0
CD A:PRO301 4.4 17.8 1.0
N A:PRO301 4.5 19.2 1.0
SD A:MET497 4.6 23.4 1.0
HB3 A:MET497 4.6 24.6 1.0
HG2 A:PRO301 4.6 26.2 1.0
SG A:CYS503 4.7 19.0 1.0
CA A:ALA498 4.7 18.6 1.0
N A:CYS499 4.7 18.5 1.0
SG A:CYS499 4.8 19.4 1.0
CA A:GLY302 4.8 18.0 1.0
SG A:CYS355 4.8 18.3 1.0
HB2 A:CYS499 5.0 24.8 1.0
HB1 A:ALA498 5.0 25.0 1.0

Iron binding site 4 out of 36 in 4xdd

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Iron binding site 4 out of 36 in the Apo [Fefe]-Hydrogenase Cpi


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Apo [Fefe]-Hydrogenase Cpi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe601

b:18.8
occ:1.00
FE4 A:SF4601 0.0 18.8 1.0
S3 A:SF4601 2.2 18.8 1.0
SG A:CYS503 2.3 19.0 1.0
S2 A:SF4601 2.3 19.2 1.0
S1 A:SF4601 2.3 19.2 1.0
FE1 A:SF4601 2.7 18.9 1.0
FE3 A:SF4601 2.7 18.6 1.0
FE2 A:SF4601 2.7 18.6 1.0
HA A:CYS503 2.8 21.0 1.0
CB A:CYS503 3.2 18.5 1.0
HB3 A:CYS503 3.4 22.2 1.0
CA A:CYS503 3.4 17.5 1.0
S4 A:SF4601 3.9 19.6 1.0
N A:CYS503 3.9 18.7 1.0
H A:CYS503 4.1 22.4 1.0
HB2 A:CYS503 4.1 22.2 1.0
HB2 A:CYS355 4.1 21.7 1.0
O A:HOH1381 4.3 20.2 1.0
SD A:MET497 4.4 23.4 1.0
HB2 A:CYS499 4.4 24.8 1.0
HG2 A:PRO354 4.6 21.4 1.0
C A:GLY502 4.6 18.9 1.0
HB2 A:CYS300 4.6 24.2 1.0
SG A:CYS355 4.7 18.3 1.0
SG A:CYS300 4.8 18.9 1.0
C A:CYS503 4.8 19.0 1.0
H A:CYS499 4.8 22.1 1.0
HA A:CYS300 4.8 22.0 1.0
HD2 A:PRO301 4.9 21.4 1.0
HA3 A:GLY506 4.9 20.6 1.0
CB A:CYS355 4.9 18.1 1.0
SG A:CYS499 4.9 19.4 1.0
HB3 A:MET497 4.9 24.6 1.0
O A:HOH1042 5.0 18.3 1.0
HA2 A:GLY506 5.0 20.6 1.0
HA2 A:GLY502 5.0 24.6 1.0
O A:GLY502 5.0 19.4 1.0

Iron binding site 5 out of 36 in 4xdd

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Iron binding site 5 out of 36 in the Apo [Fefe]-Hydrogenase Cpi


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Apo [Fefe]-Hydrogenase Cpi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe602

b:18.9
occ:1.00
FE1 A:SF4602 0.0 18.9 1.0
S4 A:SF4602 2.3 19.3 1.0
SG A:CYS193 2.3 18.9 1.0
S2 A:SF4602 2.3 19.4 1.0
S3 A:SF4602 2.3 19.3 1.0
FE3 A:SF4602 2.8 19.1 1.0
FE2 A:SF4602 2.8 19.1 1.0
FE4 A:SF4602 2.8 19.3 1.0
H A:CYS193 3.0 20.7 1.0
HG21 A:THR161 3.2 26.3 1.0
H A:GLY194 3.2 23.2 1.0
H A:GLN195 3.4 23.5 1.0
N A:CYS193 3.7 17.3 1.0
CB A:CYS193 3.7 17.1 1.0
N A:GLY194 3.8 19.4 1.0
HB2 A:LEU191 3.9 20.6 1.0
HB2 A:GLN195 3.9 21.8 1.0
HB3 A:CYS193 3.9 20.6 1.0
H A:LEU191 3.9 22.0 1.0
S1 A:SF4602 4.0 19.5 1.0
CA A:CYS193 4.0 17.9 1.0
CG2 A:THR161 4.1 21.9 1.0
H A:LEU192 4.1 20.8 1.0
HG23 A:THR161 4.2 26.3 1.0
N A:GLN195 4.2 19.6 1.0
H A:CYS196 4.2 21.6 1.0
C A:CYS193 4.2 18.1 1.0
N A:LEU192 4.4 17.4 1.0
HG22 A:THR161 4.4 26.3 1.0
HB2 A:CYS193 4.4 20.6 1.0
C A:LEU192 4.6 19.1 1.0
HA A:LEU192 4.6 21.6 1.0
N A:LEU191 4.7 18.4 1.0
CA A:GLY194 4.7 19.1 1.0
SG A:CYS190 4.7 19.6 1.0
HA2 A:GLY194 4.7 22.9 1.0
SG A:CYS196 4.7 19.1 1.0
CB A:GLN195 4.8 18.2 1.0
CB A:LEU191 4.8 17.1 1.0
HG2 A:GLN195 4.8 23.1 1.0
HA A:CYS157 4.8 22.1 1.0
HG A:LEU191 4.8 21.5 1.0
CA A:LEU192 4.8 18.0 1.0
SG A:CYS157 4.9 19.8 1.0
C A:GLY194 4.9 20.9 1.0
C A:LEU191 5.0 19.1 1.0
N A:CYS196 5.0 18.0 1.0
HA A:CYS193 5.0 21.5 1.0

Iron binding site 6 out of 36 in 4xdd

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Iron binding site 6 out of 36 in the Apo [Fefe]-Hydrogenase Cpi


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Apo [Fefe]-Hydrogenase Cpi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe602

b:19.1
occ:1.00
FE2 A:SF4602 0.0 19.1 1.0
S3 A:SF4602 2.3 19.3 1.0
S1 A:SF4602 2.3 19.5 1.0
SG A:CYS157 2.3 19.8 1.0
S4 A:SF4602 2.3 19.3 1.0
FE4 A:SF4602 2.7 19.3 1.0
FE3 A:SF4602 2.7 19.1 1.0
FE1 A:SF4602 2.8 18.9 1.0
HB2 A:CYS157 3.0 23.8 1.0
HB3 A:ALA165 3.2 22.6 1.0
CB A:CYS157 3.2 19.8 1.0
HA A:CYS157 3.5 22.1 1.0
HG21 A:THR161 3.8 26.3 1.0
HG1 A:THR163 3.8 24.8 1.0
H A:MET166 3.8 24.2 1.0
S2 A:SF4602 3.9 19.4 1.0
CA A:CYS157 4.0 18.4 1.0
HB2 A:MET166 4.0 23.9 1.0
HB3 A:CYS157 4.0 23.8 1.0
H A:ALA165 4.1 23.8 1.0
OG1 A:THR163 4.1 20.6 1.0
HG1 A:THR161 4.1 22.4 1.0
CB A:ALA165 4.1 18.9 1.0
OG1 A:THR161 4.3 18.7 1.0
N A:MET166 4.4 20.2 1.0
HG23 A:THR161 4.4 26.3 1.0
HB3 A:CYS196 4.4 21.2 1.0
CG2 A:THR161 4.5 21.9 1.0
HB3 A:MET166 4.5 23.9 1.0
HB2 A:ALA165 4.5 22.6 1.0
HB1 A:ALA165 4.6 22.6 1.0
CB A:MET166 4.6 19.9 1.0
H A:LEU191 4.6 22.0 1.0
N A:ALA165 4.7 19.8 1.0
HA A:CYS190 4.7 27.6 1.0
C A:CYS157 4.8 19.0 1.0
CA A:ALA165 4.8 20.5 1.0
SG A:CYS193 4.8 18.9 1.0
H A:CYS196 4.8 21.6 1.0
SG A:CYS196 4.9 19.1 1.0
O A:CYS157 4.9 20.8 1.0
C A:ALA165 4.9 20.5 1.0
SG A:CYS190 4.9 19.6 1.0
HE2 A:MET166 5.0 22.5 1.0

Iron binding site 7 out of 36 in 4xdd

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Iron binding site 7 out of 36 in the Apo [Fefe]-Hydrogenase Cpi


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Apo [Fefe]-Hydrogenase Cpi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe602

b:19.1
occ:1.00
FE3 A:SF4602 0.0 19.1 1.0
S2 A:SF4602 2.3 19.4 1.0
SG A:CYS196 2.3 19.1 1.0
S4 A:SF4602 2.3 19.3 1.0
S1 A:SF4602 2.3 19.5 1.0
FE4 A:SF4602 2.7 19.3 1.0
FE2 A:SF4602 2.7 19.1 1.0
FE1 A:SF4602 2.8 18.9 1.0
HB3 A:CYS196 3.0 21.2 1.0
H A:CYS196 3.1 21.6 1.0
CB A:CYS196 3.3 17.7 1.0
HE2 A:MET166 3.7 22.5 1.0
HD11 A:LEU140 3.8 30.7 1.0
H A:GLY194 3.8 23.2 1.0
N A:CYS196 3.9 18.0 1.0
S3 A:SF4602 3.9 19.3 1.0
HB2 A:CYS196 4.0 21.2 1.0
HB2 A:MET166 4.1 23.9 1.0
HA2 A:GLY194 4.1 22.9 1.0
HB2 A:CYS157 4.1 23.8 1.0
HD13 A:LEU140 4.1 30.7 1.0
H A:GLN195 4.2 23.5 1.0
CA A:CYS196 4.2 18.6 1.0
CD1 A:LEU140 4.4 25.6 1.0
N A:GLY194 4.4 19.4 1.0
N A:GLN195 4.5 19.6 1.0
CE A:MET166 4.5 18.8 1.0
CA A:GLY194 4.6 19.1 1.0
HE3 A:MET166 4.6 22.5 1.0
SG A:CYS190 4.6 19.6 1.0
SG A:CYS193 4.7 18.9 1.0
SG A:CYS157 4.7 19.8 1.0
C A:GLY194 4.8 20.9 1.0
HB2 A:GLN195 4.8 21.8 1.0
HA A:CYS196 4.8 22.4 1.0
H A:ILE197 4.8 21.7 1.0
CB A:CYS157 4.9 19.8 1.0
HE1 A:MET166 4.9 22.5 1.0
HD12 A:LEU140 4.9 30.7 1.0
HD21 A:LEU140 4.9 31.6 1.0
H A:CYS193 4.9 20.7 1.0
C A:GLN195 5.0 18.8 1.0
HE2 A:PHE185 5.0 28.3 1.0

Iron binding site 8 out of 36 in 4xdd

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Iron binding site 8 out of 36 in the Apo [Fefe]-Hydrogenase Cpi


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Apo [Fefe]-Hydrogenase Cpi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe602

b:19.3
occ:1.00
FE4 A:SF4602 0.0 19.3 1.0
S1 A:SF4602 2.3 19.5 1.0
SG A:CYS190 2.3 19.6 1.0
S2 A:SF4602 2.3 19.4 1.0
S3 A:SF4602 2.3 19.3 1.0
FE2 A:SF4602 2.7 19.1 1.0
FE3 A:SF4602 2.7 19.1 1.0
FE1 A:SF4602 2.8 18.9 1.0
H A:LEU192 3.2 20.8 1.0
H A:LEU191 3.2 22.0 1.0
HA A:CYS190 3.3 27.6 1.0
HB3 A:ALA165 3.3 22.6 1.0
CB A:CYS190 3.4 21.2 1.0
HB2 A:CYS190 3.5 25.5 1.0
HD11 A:LEU140 3.7 30.7 1.0
CA A:CYS190 3.8 23.0 1.0
N A:LEU191 3.8 18.4 1.0
S4 A:SF4602 3.9 19.3 1.0
HD2 A:PHE185 3.9 24.8 1.0
N A:LEU192 3.9 17.4 1.0
HA A:LEU192 4.0 21.6 1.0
HB1 A:ALA165 4.1 22.6 1.0
CB A:ALA165 4.1 18.9 1.0
H A:CYS193 4.2 20.7 1.0
C A:CYS190 4.2 20.2 1.0
HB3 A:CYS190 4.2 25.5 1.0
HB2 A:ALA165 4.5 22.6 1.0
HD23 A:LEU192 4.5 23.5 1.0
CA A:LEU192 4.5 18.0 1.0
H A:GLY194 4.5 23.2 1.0
CD1 A:LEU140 4.6 25.6 1.0
CD2 A:PHE185 4.6 20.7 1.0
HD12 A:LEU140 4.7 30.7 1.0
HE2 A:PHE185 4.8 28.3 1.0
SG A:CYS157 4.8 19.8 1.0
HB2 A:LEU191 4.8 20.6 1.0
N A:CYS193 4.8 17.3 1.0
SG A:CYS196 4.8 19.1 1.0
CA A:LEU191 4.8 19.0 1.0
HD13 A:LEU140 4.8 30.7 1.0
C A:LEU191 4.9 19.1 1.0
HB3 A:PHE185 4.9 23.9 1.0
HB2 A:MET166 5.0 23.9 1.0

Iron binding site 9 out of 36 in 4xdd

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Iron binding site 9 out of 36 in the Apo [Fefe]-Hydrogenase Cpi


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Apo [Fefe]-Hydrogenase Cpi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe603

b:20.0
occ:1.00
FE1 A:SF4603 0.0 20.0 1.0
S2 A:SF4603 2.3 20.7 1.0
S4 A:SF4603 2.3 20.6 1.0
S3 A:SF4603 2.3 19.2 1.0
SG A:CYS200 2.3 21.0 1.0
FE4 A:SF4603 2.7 20.3 1.0
FE3 A:SF4603 2.7 20.4 1.0
FE2 A:SF4603 2.8 20.7 1.0
HD2 A:PRO201 3.0 24.8 1.0
HB3 A:ALA204 3.0 26.6 1.0
HA A:CYS200 3.4 24.3 1.0
HB2 A:CYS200 3.4 22.5 1.0
CB A:CYS200 3.4 18.8 1.0
HG22 A:VAL202 3.8 25.7 1.0
HG A:LEU205 3.8 22.6 1.0
S1 A:SF4603 3.9 20.5 1.0
CB A:ALA204 3.9 22.2 1.0
CA A:CYS200 3.9 20.2 1.0
CD A:PRO201 4.0 20.6 1.0
HG23 A:VAL202 4.0 25.7 1.0
HD12 A:LEU205 4.1 27.4 1.0
HB2 A:ALA204 4.2 26.6 1.0
HB1 A:ALA204 4.2 26.6 1.0
HB3 A:CYS153 4.2 23.2 1.0
HB3 A:CYS200 4.3 22.5 1.0
CG2 A:VAL202 4.3 21.4 1.0
HD3 A:PRO201 4.3 24.8 1.0
H A:VAL202 4.4 26.9 1.0
H A:LEU205 4.4 23.1 1.0
HA A:CYS147 4.4 23.9 1.0
HG21 A:VAL202 4.6 25.7 1.0
H A:LEU148 4.6 27.3 1.0
HD11 A:LEU205 4.6 27.4 1.0
CG A:LEU205 4.6 18.9 1.0
H A:ALA204 4.6 24.6 1.0
CD1 A:LEU205 4.6 22.8 1.0
N A:PRO201 4.6 18.6 1.0
HG2 A:PRO201 4.7 25.8 1.0
C A:CYS200 4.7 18.4 1.0
SG A:CYS150 4.7 21.8 1.0
HB2 A:LEU205 4.7 25.7 1.0
SG A:CYS153 4.8 19.2 1.0
H A:CYS153 4.8 22.2 1.0
CG A:PRO201 4.9 21.5 1.0
N A:LEU205 4.9 19.2 1.0
SG A:CYS147 4.9 20.6 1.0
CB A:CYS153 5.0 19.4 1.0

Iron binding site 10 out of 36 in 4xdd

Go back to Iron Binding Sites List in 4xdd
Iron binding site 10 out of 36 in the Apo [Fefe]-Hydrogenase Cpi


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Apo [Fefe]-Hydrogenase Cpi within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe603

b:20.7
occ:1.00
FE2 A:SF4603 0.0 20.7 1.0
S3 A:SF4603 2.3 19.2 1.0
SG A:CYS150 2.3 21.8 1.0
S1 A:SF4603 2.3 20.5 1.0
S4 A:SF4603 2.3 20.6 1.0
FE4 A:SF4603 2.7 20.3 1.0
H A:CYS150 2.8 27.3 1.0
FE3 A:SF4603 2.8 20.4 1.0
FE1 A:SF4603 2.8 20.0 1.0
H A:GLY151 3.3 25.3 1.0
H A:ARG152 3.4 25.8 1.0
HD2 A:PRO201 3.4 24.8 1.0
N A:CYS150 3.5 22.7 1.0
CB A:CYS150 3.6 23.3 1.0
HB3 A:CYS150 3.7 27.9 1.0
HB2 A:ARG152 3.8 23.7 1.0
N A:GLY151 3.8 21.1 1.0
S2 A:SF4603 3.9 20.7 1.0
CA A:CYS150 3.9 20.8 1.0
H A:CYS153 4.0 22.2 1.0
H A:LEU148 4.0 27.3 1.0
HD3 A:PRO201 4.1 24.8 1.0
N A:ARG152 4.1 21.5 1.0
CD A:PRO201 4.1 20.6 1.0
H A:LEU149 4.2 25.4 1.0
HB2 A:LEU148 4.2 25.5 1.0
C A:CYS150 4.2 21.6 1.0
HB2 A:CYS150 4.4 27.9 1.0
HA A:CYS200 4.4 24.3 1.0
N A:LEU149 4.4 21.1 1.0
HG3 A:PRO201 4.4 25.8 1.0
HA A:LEU149 4.5 25.7 1.0
HG2 A:PRO201 4.6 25.8 1.0
C A:LEU149 4.6 23.5 1.0
CG A:PRO201 4.6 21.5 1.0
CB A:ARG152 4.7 19.7 1.0
N A:LEU148 4.8 22.7 1.0
SG A:CYS153 4.8 19.2 1.0
CA A:LEU149 4.8 21.4 1.0
CA A:GLY151 4.8 20.9 1.0
SG A:CYS200 4.8 21.0 1.0
SG A:CYS147 4.8 20.6 1.0
N A:CYS153 4.8 18.5 1.0
HD3 A:ARG152 4.8 25.4 1.0
HA A:CYS150 4.9 25.0 1.0
C A:GLY151 4.9 24.2 1.0
HG22 A:VAL202 4.9 25.7 1.0
HA2 A:GLY151 4.9 25.0 1.0
CA A:ARG152 4.9 20.0 1.0
HB3 A:CYS153 5.0 23.2 1.0

Reference:

J.Esselborn, N.Muraki, K.Klein, V.Engelbrecht, N.Metzler-Nolte, U.P.Apfel, E.Hofmann, G.Kurisu, T.Happe. A Structural View of Synthetic Cofactor Integration Into [Fefe]-Hydrogenases. Chem Sci V. 7 959 2016.
ISSN: ISSN 2041-6520
PubMed: 29896366
DOI: 10.1039/C5SC03397G
Page generated: Sun Dec 13 15:51:44 2020

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