Iron in PDB 5h57: Ferredoxin III From Maize Root
Protein crystallography data
The structure of Ferredoxin III From Maize Root, PDB code: 5h57
was solved by
G.Kurisu,
T.Hase,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
43.73 /
2.50
|
|
Space group
|
P 21 21 21
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
79.900,
104.500,
66.400,
90.00,
90.00,
90.00
|
|
R / Rfree (%)
|
18.9 /
21.1
|
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
12;
Binding sites:
The binding sites of Iron atom in the Ferredoxin III From Maize Root
(pdb code 5h57). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 12 binding sites of Iron where determined in the
Ferredoxin III From Maize Root, PDB code: 5h57:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 12 in 5h57
Go back to
Iron Binding Sites List in 5h57
Iron binding site 1 out
of 12 in the Ferredoxin III From Maize Root
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Ferredoxin III From Maize Root within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe101
b:21.2
occ:1.00
|
FE1
|
A:FES101
|
0.0
|
21.2
|
1.0
|
|
S1
|
A:FES101
|
2.2
|
21.0
|
1.0
|
|
S2
|
A:FES101
|
2.2
|
20.5
|
1.0
|
|
SG
|
A:CYS78
|
2.3
|
15.8
|
1.0
|
|
SG
|
A:CYS48
|
2.4
|
20.0
|
1.0
|
|
FE2
|
A:FES101
|
2.7
|
21.9
|
1.0
|
|
CB
|
A:CYS78
|
3.2
|
16.1
|
1.0
|
|
CB
|
A:CYS48
|
3.4
|
18.1
|
1.0
|
|
N
|
A:CYS78
|
4.2
|
16.7
|
1.0
|
|
CA
|
A:CYS78
|
4.3
|
16.1
|
1.0
|
|
N
|
A:GLY43
|
4.3
|
23.5
|
1.0
|
|
N
|
A:CYS48
|
4.3
|
18.3
|
1.0
|
|
SG
|
A:CYS40
|
4.4
|
21.7
|
1.0
|
|
N
|
A:ARG41
|
4.4
|
25.5
|
1.0
|
|
CA
|
A:CYS48
|
4.5
|
17.8
|
1.0
|
|
CA
|
A:ARG41
|
4.5
|
25.9
|
1.0
|
|
CB
|
A:LEU76
|
4.6
|
14.8
|
1.0
|
|
CA
|
A:GLY43
|
4.6
|
23.3
|
1.0
|
|
SG
|
A:CYS45
|
4.6
|
21.6
|
1.0
|
|
N
|
A:ALA42
|
4.8
|
25.0
|
1.0
|
|
O
|
A:CYS45
|
4.9
|
22.1
|
1.0
|
|
C
|
A:ARG41
|
5.0
|
25.8
|
1.0
|
|
CD2
|
A:LEU76
|
5.0
|
13.3
|
1.0
|
|
Iron binding site 2 out
of 12 in 5h57
Go back to
Iron Binding Sites List in 5h57
Iron binding site 2 out
of 12 in the Ferredoxin III From Maize Root
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Ferredoxin III From Maize Root within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe101
b:21.9
occ:1.00
|
FE2
|
A:FES101
|
0.0
|
21.9
|
1.0
|
|
S1
|
A:FES101
|
2.2
|
21.0
|
1.0
|
|
S2
|
A:FES101
|
2.2
|
20.5
|
1.0
|
|
SG
|
A:CYS45
|
2.3
|
21.6
|
1.0
|
|
SG
|
A:CYS40
|
2.4
|
21.7
|
1.0
|
|
FE1
|
A:FES101
|
2.7
|
21.2
|
1.0
|
|
CB
|
A:CYS45
|
3.4
|
22.8
|
1.0
|
|
CB
|
A:CYS40
|
3.5
|
24.0
|
1.0
|
|
N
|
A:CYS45
|
3.6
|
22.4
|
1.0
|
|
N
|
A:CYS40
|
3.6
|
25.3
|
1.0
|
|
N
|
A:ARG41
|
3.8
|
25.5
|
1.0
|
|
CA
|
A:CYS45
|
3.8
|
22.6
|
1.0
|
|
CA
|
A:CYS40
|
4.0
|
24.2
|
1.0
|
|
C
|
A:CYS45
|
4.0
|
22.4
|
1.0
|
|
O
|
A:CYS45
|
4.2
|
22.1
|
1.0
|
|
N
|
A:ALA44
|
4.3
|
23.5
|
1.0
|
|
C
|
A:CYS40
|
4.3
|
25.3
|
1.0
|
|
SG
|
A:CYS78
|
4.4
|
15.8
|
1.0
|
|
N
|
A:GLY43
|
4.4
|
23.5
|
1.0
|
|
C
|
A:ALA44
|
4.5
|
23.2
|
1.0
|
|
N
|
A:ALA42
|
4.6
|
25.0
|
1.0
|
|
N
|
A:SER39
|
4.6
|
28.3
|
1.0
|
|
N
|
A:SER46
|
4.6
|
22.1
|
1.0
|
|
C
|
A:SER39
|
4.6
|
26.7
|
1.0
|
|
SG
|
A:CYS48
|
4.7
|
20.0
|
1.0
|
|
CA
|
A:ARG41
|
4.7
|
25.9
|
1.0
|
|
N
|
A:THR47
|
4.8
|
20.1
|
1.0
|
|
CA
|
A:GLY43
|
4.8
|
23.3
|
1.0
|
|
CB
|
A:SER39
|
4.8
|
27.9
|
1.0
|
|
C
|
A:GLY43
|
4.9
|
23.9
|
1.0
|
|
CA
|
A:SER39
|
4.9
|
27.6
|
1.0
|
|
CA
|
A:ALA44
|
5.0
|
23.6
|
1.0
|
|
CB
|
A:THR47
|
5.0
|
20.2
|
1.0
|
|
Iron binding site 3 out
of 12 in 5h57
Go back to
Iron Binding Sites List in 5h57
Iron binding site 3 out
of 12 in the Ferredoxin III From Maize Root
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Ferredoxin III From Maize Root within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe101
b:19.4
occ:1.00
|
FE1
|
B:FES101
|
0.0
|
19.4
|
1.0
|
|
S1
|
B:FES101
|
2.2
|
21.0
|
1.0
|
|
S2
|
B:FES101
|
2.2
|
21.5
|
1.0
|
|
SG
|
B:CYS48
|
2.3
|
17.2
|
1.0
|
|
SG
|
B:CYS78
|
2.4
|
16.0
|
1.0
|
|
FE2
|
B:FES101
|
2.7
|
22.4
|
1.0
|
|
CB
|
B:CYS78
|
3.2
|
17.6
|
1.0
|
|
CB
|
B:CYS48
|
3.4
|
18.3
|
1.0
|
|
N
|
B:CYS78
|
4.2
|
16.6
|
1.0
|
|
CA
|
B:CYS78
|
4.3
|
16.5
|
1.0
|
|
N
|
B:CYS48
|
4.3
|
18.6
|
1.0
|
|
N
|
B:GLY43
|
4.3
|
23.2
|
1.0
|
|
N
|
B:ARG41
|
4.4
|
24.7
|
1.0
|
|
CA
|
B:CYS48
|
4.4
|
18.2
|
1.0
|
|
SG
|
B:CYS40
|
4.4
|
25.1
|
1.0
|
|
CA
|
B:ARG41
|
4.5
|
24.6
|
1.0
|
|
CB
|
B:LEU76
|
4.5
|
17.6
|
1.0
|
|
CA
|
B:GLY43
|
4.6
|
23.0
|
1.0
|
|
SG
|
B:CYS45
|
4.6
|
24.4
|
1.0
|
|
N
|
B:ALA42
|
4.8
|
23.8
|
1.0
|
|
O
|
B:CYS45
|
5.0
|
22.7
|
1.0
|
|
CD2
|
B:LEU76
|
5.0
|
18.8
|
1.0
|
|
Iron binding site 4 out
of 12 in 5h57
Go back to
Iron Binding Sites List in 5h57
Iron binding site 4 out
of 12 in the Ferredoxin III From Maize Root
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Ferredoxin III From Maize Root within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe101
b:22.4
occ:1.00
|
FE2
|
B:FES101
|
0.0
|
22.4
|
1.0
|
|
S1
|
B:FES101
|
2.2
|
21.0
|
1.0
|
|
S2
|
B:FES101
|
2.2
|
21.5
|
1.0
|
|
SG
|
B:CYS45
|
2.4
|
24.4
|
1.0
|
|
SG
|
B:CYS40
|
2.4
|
25.1
|
1.0
|
|
FE1
|
B:FES101
|
2.7
|
19.4
|
1.0
|
|
CB
|
B:CYS45
|
3.4
|
23.0
|
1.0
|
|
CB
|
B:CYS40
|
3.6
|
24.2
|
1.0
|
|
N
|
B:CYS45
|
3.6
|
24.1
|
1.0
|
|
N
|
B:CYS40
|
3.6
|
24.3
|
1.0
|
|
N
|
B:ARG41
|
3.8
|
24.7
|
1.0
|
|
CA
|
B:CYS45
|
3.9
|
22.7
|
1.0
|
|
CA
|
B:CYS40
|
4.0
|
24.2
|
1.0
|
|
C
|
B:CYS45
|
4.0
|
22.4
|
1.0
|
|
O
|
B:CYS45
|
4.2
|
22.7
|
1.0
|
|
N
|
B:ALA44
|
4.3
|
22.8
|
1.0
|
|
C
|
B:CYS40
|
4.3
|
24.8
|
1.0
|
|
SG
|
B:CYS78
|
4.4
|
16.0
|
1.0
|
|
N
|
B:GLY43
|
4.4
|
23.2
|
1.0
|
|
N
|
B:ALA42
|
4.5
|
23.8
|
1.0
|
|
C
|
B:ALA44
|
4.6
|
23.5
|
1.0
|
|
SG
|
B:CYS48
|
4.6
|
17.2
|
1.0
|
|
N
|
B:SER39
|
4.6
|
26.2
|
1.0
|
|
N
|
B:SER46
|
4.6
|
22.0
|
1.0
|
|
C
|
B:SER39
|
4.6
|
24.6
|
1.0
|
|
CA
|
B:ARG41
|
4.7
|
24.6
|
1.0
|
|
N
|
B:THR47
|
4.8
|
19.9
|
1.0
|
|
CA
|
B:GLY43
|
4.8
|
23.0
|
1.0
|
|
CB
|
B:SER39
|
4.9
|
25.9
|
1.0
|
|
C
|
B:GLY43
|
4.9
|
23.1
|
1.0
|
|
CA
|
B:SER39
|
4.9
|
25.4
|
1.0
|
|
CB
|
B:THR47
|
5.0
|
20.2
|
1.0
|
|
N
|
B:CYS48
|
5.0
|
18.6
|
1.0
|
|
CA
|
B:ALA44
|
5.0
|
23.3
|
1.0
|
|
Iron binding site 5 out
of 12 in 5h57
Go back to
Iron Binding Sites List in 5h57
Iron binding site 5 out
of 12 in the Ferredoxin III From Maize Root
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Ferredoxin III From Maize Root within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe101
b:18.2
occ:1.00
|
FE1
|
C:FES101
|
0.0
|
18.2
|
1.0
|
|
S1
|
C:FES101
|
2.2
|
17.7
|
1.0
|
|
S2
|
C:FES101
|
2.2
|
18.8
|
1.0
|
|
SG
|
C:CYS48
|
2.3
|
16.8
|
1.0
|
|
SG
|
C:CYS78
|
2.4
|
18.4
|
1.0
|
|
FE2
|
C:FES101
|
2.7
|
19.1
|
1.0
|
|
CB
|
C:CYS78
|
3.2
|
17.9
|
1.0
|
|
CB
|
C:CYS48
|
3.4
|
18.0
|
1.0
|
|
N
|
C:CYS78
|
4.2
|
17.3
|
1.0
|
|
N
|
C:CYS48
|
4.3
|
18.0
|
1.0
|
|
CA
|
C:CYS78
|
4.3
|
17.8
|
1.0
|
|
N
|
C:GLY43
|
4.4
|
24.2
|
1.0
|
|
N
|
C:ARG41
|
4.4
|
26.2
|
1.0
|
|
SG
|
C:CYS40
|
4.4
|
22.2
|
1.0
|
|
CA
|
C:CYS48
|
4.4
|
17.5
|
1.0
|
|
CA
|
C:ARG41
|
4.5
|
26.2
|
1.0
|
|
CB
|
C:LEU76
|
4.6
|
17.5
|
1.0
|
|
SG
|
C:CYS45
|
4.6
|
24.6
|
1.0
|
|
CA
|
C:GLY43
|
4.6
|
23.8
|
1.0
|
|
N
|
C:ALA42
|
4.8
|
24.6
|
1.0
|
|
O
|
C:CYS45
|
4.9
|
21.8
|
1.0
|
|
C
|
C:ARG41
|
5.0
|
25.7
|
1.0
|
|
Iron binding site 6 out
of 12 in 5h57
Go back to
Iron Binding Sites List in 5h57
Iron binding site 6 out
of 12 in the Ferredoxin III From Maize Root
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Ferredoxin III From Maize Root within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe101
b:19.1
occ:1.00
|
FE2
|
C:FES101
|
0.0
|
19.1
|
1.0
|
|
S1
|
C:FES101
|
2.2
|
17.7
|
1.0
|
|
S2
|
C:FES101
|
2.2
|
18.8
|
1.0
|
|
SG
|
C:CYS45
|
2.3
|
24.6
|
1.0
|
|
SG
|
C:CYS40
|
2.4
|
22.2
|
1.0
|
|
FE1
|
C:FES101
|
2.7
|
18.2
|
1.0
|
|
CB
|
C:CYS45
|
3.4
|
22.8
|
1.0
|
|
CB
|
C:CYS40
|
3.6
|
24.5
|
1.0
|
|
N
|
C:CYS45
|
3.6
|
21.9
|
1.0
|
|
N
|
C:CYS40
|
3.6
|
24.9
|
1.0
|
|
N
|
C:ARG41
|
3.8
|
26.2
|
1.0
|
|
CA
|
C:CYS45
|
3.8
|
22.3
|
1.0
|
|
CA
|
C:CYS40
|
4.0
|
25.2
|
1.0
|
|
C
|
C:CYS45
|
4.0
|
22.2
|
1.0
|
|
O
|
C:CYS45
|
4.1
|
21.8
|
1.0
|
|
N
|
C:ALA44
|
4.3
|
23.0
|
1.0
|
|
C
|
C:CYS40
|
4.3
|
26.1
|
1.0
|
|
SG
|
C:CYS78
|
4.4
|
18.4
|
1.0
|
|
N
|
C:GLY43
|
4.4
|
24.2
|
1.0
|
|
C
|
C:ALA44
|
4.5
|
21.6
|
1.0
|
|
N
|
C:ALA42
|
4.6
|
24.6
|
1.0
|
|
N
|
C:SER46
|
4.6
|
22.5
|
1.0
|
|
SG
|
C:CYS48
|
4.6
|
16.8
|
1.0
|
|
N
|
C:SER39
|
4.6
|
26.9
|
1.0
|
|
C
|
C:SER39
|
4.7
|
26.4
|
1.0
|
|
CA
|
C:ARG41
|
4.7
|
26.2
|
1.0
|
|
N
|
C:THR47
|
4.7
|
21.0
|
1.0
|
|
CA
|
C:GLY43
|
4.8
|
23.8
|
1.0
|
|
CB
|
C:SER39
|
4.9
|
26.7
|
1.0
|
|
C
|
C:GLY43
|
4.9
|
23.3
|
1.0
|
|
CA
|
C:SER39
|
5.0
|
26.3
|
1.0
|
|
CB
|
C:THR47
|
5.0
|
21.0
|
1.0
|
|
CA
|
C:ALA44
|
5.0
|
22.3
|
1.0
|
|
Iron binding site 7 out
of 12 in 5h57
Go back to
Iron Binding Sites List in 5h57
Iron binding site 7 out
of 12 in the Ferredoxin III From Maize Root
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Ferredoxin III From Maize Root within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe101
b:21.1
occ:1.00
|
FE1
|
D:FES101
|
0.0
|
21.1
|
1.0
|
|
S1
|
D:FES101
|
2.2
|
19.1
|
1.0
|
|
S2
|
D:FES101
|
2.2
|
19.6
|
1.0
|
|
SG
|
D:CYS78
|
2.3
|
14.4
|
1.0
|
|
SG
|
D:CYS48
|
2.4
|
16.8
|
1.0
|
|
FE2
|
D:FES101
|
2.7
|
21.4
|
1.0
|
|
CB
|
D:CYS78
|
3.2
|
15.8
|
1.0
|
|
CB
|
D:CYS48
|
3.4
|
16.0
|
1.0
|
|
N
|
D:CYS78
|
4.2
|
15.9
|
1.0
|
|
CA
|
D:CYS78
|
4.3
|
16.4
|
1.0
|
|
N
|
D:GLY43
|
4.3
|
24.1
|
1.0
|
|
N
|
D:CYS48
|
4.3
|
17.2
|
1.0
|
|
N
|
D:ARG41
|
4.3
|
25.3
|
1.0
|
|
SG
|
D:CYS40
|
4.4
|
23.0
|
1.0
|
|
CA
|
D:ARG41
|
4.5
|
25.8
|
1.0
|
|
CA
|
D:CYS48
|
4.5
|
17.0
|
1.0
|
|
CA
|
D:GLY43
|
4.6
|
23.8
|
1.0
|
|
CB
|
D:LEU76
|
4.6
|
17.7
|
1.0
|
|
SG
|
D:CYS45
|
4.6
|
23.1
|
1.0
|
|
N
|
D:ALA42
|
4.8
|
24.2
|
1.0
|
|
O
|
D:CYS45
|
4.9
|
22.0
|
1.0
|
|
C
|
D:ARG41
|
5.0
|
24.9
|
1.0
|
|
Iron binding site 8 out
of 12 in 5h57
Go back to
Iron Binding Sites List in 5h57
Iron binding site 8 out
of 12 in the Ferredoxin III From Maize Root
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Ferredoxin III From Maize Root within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe101
b:21.4
occ:1.00
|
FE2
|
D:FES101
|
0.0
|
21.4
|
1.0
|
|
S1
|
D:FES101
|
2.2
|
19.1
|
1.0
|
|
S2
|
D:FES101
|
2.2
|
19.6
|
1.0
|
|
SG
|
D:CYS45
|
2.3
|
23.1
|
1.0
|
|
SG
|
D:CYS40
|
2.5
|
23.0
|
1.0
|
|
FE1
|
D:FES101
|
2.7
|
21.1
|
1.0
|
|
CB
|
D:CYS45
|
3.4
|
22.2
|
1.0
|
|
N
|
D:CYS45
|
3.6
|
22.8
|
1.0
|
|
CB
|
D:CYS40
|
3.6
|
24.5
|
1.0
|
|
N
|
D:CYS40
|
3.6
|
25.2
|
1.0
|
|
CA
|
D:CYS45
|
3.8
|
22.3
|
1.0
|
|
N
|
D:ARG41
|
3.9
|
25.3
|
1.0
|
|
C
|
D:CYS45
|
3.9
|
22.0
|
1.0
|
|
CA
|
D:CYS40
|
4.0
|
24.9
|
1.0
|
|
O
|
D:CYS45
|
4.1
|
22.0
|
1.0
|
|
N
|
D:ALA44
|
4.3
|
22.9
|
1.0
|
|
C
|
D:CYS40
|
4.4
|
25.3
|
1.0
|
|
SG
|
D:CYS78
|
4.4
|
14.4
|
1.0
|
|
N
|
D:GLY43
|
4.5
|
24.1
|
1.0
|
|
N
|
D:SER46
|
4.5
|
21.2
|
1.0
|
|
C
|
D:ALA44
|
4.5
|
23.3
|
1.0
|
|
N
|
D:SER39
|
4.6
|
26.6
|
1.0
|
|
SG
|
D:CYS48
|
4.6
|
16.8
|
1.0
|
|
N
|
D:ALA42
|
4.7
|
24.2
|
1.0
|
|
C
|
D:SER39
|
4.7
|
25.8
|
1.0
|
|
N
|
D:THR47
|
4.7
|
21.1
|
1.0
|
|
CA
|
D:ARG41
|
4.8
|
25.8
|
1.0
|
|
CB
|
D:SER39
|
4.8
|
28.4
|
1.0
|
|
CA
|
D:GLY43
|
4.9
|
23.8
|
1.0
|
|
CB
|
D:THR47
|
4.9
|
20.1
|
1.0
|
|
CA
|
D:SER39
|
4.9
|
26.7
|
1.0
|
|
N
|
D:CYS48
|
4.9
|
17.2
|
1.0
|
|
C
|
D:GLY43
|
5.0
|
23.1
|
1.0
|
|
Iron binding site 9 out
of 12 in 5h57
Go back to
Iron Binding Sites List in 5h57
Iron binding site 9 out
of 12 in the Ferredoxin III From Maize Root
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Ferredoxin III From Maize Root within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe101
b:23.6
occ:1.00
|
FE1
|
E:FES101
|
0.0
|
23.6
|
1.0
|
|
S1
|
E:FES101
|
2.2
|
23.5
|
1.0
|
|
S2
|
E:FES101
|
2.2
|
21.9
|
1.0
|
|
SG
|
E:CYS48
|
2.4
|
22.0
|
1.0
|
|
SG
|
E:CYS78
|
2.4
|
17.2
|
1.0
|
|
FE2
|
E:FES101
|
2.7
|
23.4
|
1.0
|
|
CB
|
E:CYS78
|
3.2
|
17.5
|
1.0
|
|
CB
|
E:CYS48
|
3.4
|
19.2
|
1.0
|
|
N
|
E:CYS78
|
4.2
|
17.9
|
1.0
|
|
N
|
E:GLY43
|
4.3
|
25.9
|
1.0
|
|
CA
|
E:CYS78
|
4.3
|
17.9
|
1.0
|
|
N
|
E:CYS48
|
4.3
|
19.8
|
1.0
|
|
N
|
E:ARG41
|
4.4
|
27.0
|
1.0
|
|
SG
|
E:CYS40
|
4.4
|
28.1
|
1.0
|
|
CA
|
E:CYS48
|
4.5
|
19.4
|
1.0
|
|
CA
|
E:ARG41
|
4.5
|
26.7
|
1.0
|
|
CB
|
E:LEU76
|
4.6
|
19.0
|
1.0
|
|
CA
|
E:GLY43
|
4.6
|
25.0
|
1.0
|
|
SG
|
E:CYS45
|
4.7
|
26.6
|
1.0
|
|
N
|
E:ALA42
|
4.8
|
26.2
|
1.0
|
|
O
|
E:CYS45
|
4.9
|
23.7
|
1.0
|
|
C
|
E:ARG41
|
5.0
|
26.8
|
1.0
|
|
CD2
|
E:LEU76
|
5.0
|
16.7
|
1.0
|
|
Iron binding site 10 out
of 12 in 5h57
Go back to
Iron Binding Sites List in 5h57
Iron binding site 10 out
of 12 in the Ferredoxin III From Maize Root
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Ferredoxin III From Maize Root within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe101
b:23.4
occ:1.00
|
FE2
|
E:FES101
|
0.0
|
23.4
|
1.0
|
|
S1
|
E:FES101
|
2.2
|
23.5
|
1.0
|
|
S2
|
E:FES101
|
2.2
|
21.9
|
1.0
|
|
SG
|
E:CYS45
|
2.4
|
26.6
|
1.0
|
|
SG
|
E:CYS40
|
2.4
|
28.1
|
1.0
|
|
FE1
|
E:FES101
|
2.7
|
23.6
|
1.0
|
|
CB
|
E:CYS45
|
3.4
|
24.9
|
1.0
|
|
CB
|
E:CYS40
|
3.6
|
26.6
|
1.0
|
|
N
|
E:CYS45
|
3.6
|
25.4
|
1.0
|
|
N
|
E:CYS40
|
3.6
|
26.0
|
1.0
|
|
N
|
E:ARG41
|
3.8
|
27.0
|
1.0
|
|
CA
|
E:CYS45
|
3.8
|
24.6
|
1.0
|
|
CA
|
E:CYS40
|
4.0
|
26.7
|
1.0
|
|
C
|
E:CYS45
|
4.0
|
23.8
|
1.0
|
|
O
|
E:CYS45
|
4.1
|
23.7
|
1.0
|
|
N
|
E:ALA44
|
4.3
|
25.4
|
1.0
|
|
C
|
E:CYS40
|
4.3
|
26.9
|
1.0
|
|
SG
|
E:CYS78
|
4.4
|
17.2
|
1.0
|
|
N
|
E:GLY43
|
4.4
|
25.9
|
1.0
|
|
C
|
E:ALA44
|
4.5
|
25.2
|
1.0
|
|
N
|
E:ALA42
|
4.6
|
26.2
|
1.0
|
|
N
|
E:SER46
|
4.6
|
23.1
|
1.0
|
|
N
|
E:SER39
|
4.6
|
27.0
|
1.0
|
|
C
|
E:SER39
|
4.6
|
26.1
|
1.0
|
|
SG
|
E:CYS48
|
4.6
|
22.0
|
1.0
|
|
CA
|
E:ARG41
|
4.7
|
26.7
|
1.0
|
|
N
|
E:THR47
|
4.8
|
21.6
|
1.0
|
|
CA
|
E:GLY43
|
4.8
|
25.0
|
1.0
|
|
CB
|
E:SER39
|
4.9
|
27.5
|
1.0
|
|
C
|
E:GLY43
|
4.9
|
25.6
|
1.0
|
|
CA
|
E:SER39
|
4.9
|
26.7
|
1.0
|
|
CB
|
E:THR47
|
5.0
|
21.8
|
1.0
|
|
CA
|
E:ALA44
|
5.0
|
25.3
|
1.0
|
|
Reference:
F.Shinohara,
G.Kurisu,
G.Hanke,
C.Bowsher,
T.Hase,
Y.Kimata-Ariga.
Structural Basis For the Isotype-Specific Interactions of Ferredoxin and Ferredoxin: Nadp(+) Oxidoreductase: An Evolutionary Switch Between Photosynthetic and Heterotrophic Assimilation Photosyn. Res. V. 134 281 2017.
ISSN: ISSN 1573-5079
PubMed: 28093652
DOI: 10.1007/S11120-016-0331-1
Page generated: Tue Aug 6 01:42:36 2024
|
