Iron in PDB 5ixv: Crystal Structure of the Signaling Protein Complex 2

The structure of Crystal Structure of the Signaling Protein Complex 2, PDB code: 5ixv was solved by V.Kumar, F.Van Den Akker, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	38.70 / 2.30
Space group	P 21 3
Cell size a, b, c (Å), α, β, γ (°)	122.387, 122.387, 122.387, 90.00, 90.00, 90.00
R / Rfree (%)	12.4 / 16.4

The binding sites of Iron atom in the Crystal Structure of the Signaling Protein Complex 2 (pdb code 5ixv). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of the Signaling Protein Complex 2, PDB code: 5ixv:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Crystal Structure of the Signaling Protein Complex 2


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the Signaling Protein Complex 2 within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe201 b:37.0 occ:1.00 FE A:HEM201 0.0 37.0 1.0 N3 A:1MZ202 1.9 47.8 1.0 ND A:HEM201 1.9 31.5 1.0 NA A:HEM201 2.0 31.5 1.0 NE2 A:HIS105 2.0 33.5 1.0 NC A:HEM201 2.0 28.2 1.0 NB A:HEM201 2.1 41.0 1.0 C4 A:1MZ202 2.8 43.2 1.0 C4D A:HEM201 2.9 29.8 1.0 CE1 A:HIS105 2.9 31.2 1.0 C1D A:HEM201 2.9 34.0 1.0 C2 A:1MZ202 3.0 43.8 1.0 C1A A:HEM201 3.0 41.4 1.0 C4B A:HEM201 3.0 34.9 1.0 C4A A:HEM201 3.0 38.7 1.0 C1B A:HEM201 3.0 40.4 1.0 C4C A:HEM201 3.0 36.6 1.0 C1C A:HEM201 3.1 38.8 1.0 CD2 A:HIS105 3.1 30.9 1.0 CHA A:HEM201 3.4 37.4 1.0 CHD A:HEM201 3.4 33.5 1.0 CHC A:HEM201 3.4 43.2 1.0 CHB A:HEM201 3.4 39.8 1.0 C5 A:1MZ202 4.0 40.4 1.0 N1 A:1MZ202 4.0 46.1 1.0 ND1 A:HIS105 4.1 30.1 1.0 C2D A:HEM201 4.1 34.0 1.0 C3D A:HEM201 4.2 32.2 1.0 CG A:HIS105 4.2 34.1 1.0 C3A A:HEM201 4.2 33.0 1.0 C2A A:HEM201 4.2 30.3 1.0 C3B A:HEM201 4.2 35.8 1.0 C2B A:HEM201 4.3 39.2 1.0 C3C A:HEM201 4.3 33.1 1.0 C2C A:HEM201 4.3 37.8 1.0 NE1 A:TRP74 4.5 32.4 1.0

Iron binding site 2 out of 2 in the Crystal Structure of the Signaling Protein Complex 2


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of the Signaling Protein Complex 2 within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe501 b:34.4 occ:1.00 FE B:HEM501 0.0 34.4 1.0 N3 B:1MZ502 1.9 53.0 1.0 ND B:HEM501 1.9 33.9 1.0 NE2 B:HIS105 2.0 34.5 1.0 NA B:HEM501 2.0 34.8 1.0 NB B:HEM501 2.0 31.0 1.0 NC B:HEM501 2.1 34.5 1.0 CE1 B:HIS105 2.7 35.9 1.0 C2 B:1MZ502 2.8 47.1 1.0 C4D B:HEM501 2.9 40.2 1.0 C1D B:HEM501 2.9 39.4 1.0 C4 B:1MZ502 2.9 37.9 1.0 C4B B:HEM501 3.0 36.0 1.0 C1A B:HEM501 3.0 34.2 1.0 C4A B:HEM501 3.0 39.3 1.0 C4C B:HEM501 3.1 37.2 1.0 C1B B:HEM501 3.1 32.3 1.0 C1C B:HEM501 3.1 34.1 1.0 CD2 B:HIS105 3.1 39.7 1.0 CHA B:HEM501 3.4 27.8 1.0 CHC B:HEM501 3.4 35.7 1.0 CHD B:HEM501 3.4 39.9 1.0 CHB B:HEM501 3.5 35.7 1.0 ND1 B:HIS105 3.9 26.5 1.0 N1 B:1MZ502 4.0 50.6 1.0 C5 B:1MZ502 4.1 47.3 1.0 CG B:HIS105 4.2 29.8 1.0 C2D B:HEM501 4.2 38.0 1.0 C2A B:HEM501 4.2 33.8 1.0 C3D B:HEM501 4.2 41.4 1.0 C3A B:HEM501 4.2 34.6 1.0 C3B B:HEM501 4.2 38.3 1.0 C3C B:HEM501 4.3 34.3 1.0 C2C B:HEM501 4.3 34.1 1.0 C2B B:HEM501 4.3 30.8 1.0 NE1 B:TRP74 4.4 39.2 1.0 CE2 B:TRP74 5.0 44.2 1.0 CZ2 B:TRP74 5.0 48.9 1.0

V.Kumar, F.Van Den Akker. Crystal Structure of the Signaling Protein Complex 2 To Be Published.