Iron in PDB 6cz7: The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3
Protein crystallography data
The structure of The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3, PDB code: 6cz7
was solved by
N.R.Glasser,
D.K.Newman,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
46.91 /
1.62
|
Space group
|
C 1 2 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
231.259,
85.639,
146.676,
90.00,
127.84,
90.00
|
R / Rfree (%)
|
13.7 /
15.5
|
Other elements in 6cz7:
The structure of The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3 also contains other interesting chemical elements:
Iron Binding Sites:
Iron binding site 1 out
of 40 in 6cz7
Go back to
Iron Binding Sites List in 6cz7
Iron binding site 1 out
of 40 in the The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe901
b:17.0
occ:1.00
|
FE1
|
A:SF4901
|
0.0
|
17.0
|
1.0
|
S2
|
A:SF4901
|
2.2
|
16.2
|
1.0
|
S3
|
A:SF4901
|
2.3
|
16.4
|
1.0
|
S4
|
A:SF4901
|
2.3
|
16.4
|
1.0
|
SG
|
A:CYS64
|
2.4
|
18.3
|
1.0
|
FE2
|
A:SF4901
|
2.7
|
16.9
|
1.0
|
FE3
|
A:SF4901
|
2.7
|
16.7
|
1.0
|
FE4
|
A:SF4901
|
2.7
|
16.9
|
1.0
|
H
|
A:CYS64
|
2.8
|
22.1
|
1.0
|
HB2
|
A:SER66
|
3.0
|
19.4
|
1.0
|
N
|
A:CYS64
|
3.2
|
18.4
|
1.0
|
HH22
|
A:ARG98
|
3.3
|
22.0
|
1.0
|
CB
|
A:CYS64
|
3.5
|
17.8
|
1.0
|
NH2
|
A:ARG98
|
3.6
|
18.3
|
1.0
|
HH12
|
A:ARG98
|
3.7
|
21.9
|
1.0
|
HG
|
A:SER66
|
3.8
|
20.7
|
1.0
|
CA
|
A:CYS64
|
3.8
|
17.7
|
1.0
|
HB3
|
A:CYS64
|
3.8
|
21.3
|
1.0
|
C
|
A:GLY63
|
3.8
|
18.8
|
1.0
|
S1
|
A:SF4901
|
3.9
|
16.8
|
1.0
|
CB
|
A:SER66
|
3.9
|
16.2
|
1.0
|
HA3
|
A:GLY63
|
3.9
|
22.6
|
1.0
|
CZ
|
A:ARG98
|
4.0
|
18.3
|
1.0
|
HH21
|
A:ARG98
|
4.0
|
22.0
|
1.0
|
NH1
|
A:ARG98
|
4.0
|
18.3
|
1.0
|
O
|
A:CYS64
|
4.0
|
18.5
|
1.0
|
H
|
A:SER66
|
4.1
|
20.9
|
1.0
|
H
|
A:GLY63
|
4.2
|
19.9
|
1.0
|
C
|
A:CYS64
|
4.2
|
17.2
|
1.0
|
OG
|
A:SER66
|
4.2
|
17.3
|
1.0
|
CA
|
A:GLY63
|
4.2
|
18.8
|
1.0
|
H
|
A:TRP67
|
4.2
|
20.9
|
1.0
|
HB2
|
A:CYS64
|
4.3
|
21.3
|
1.0
|
N
|
A:GLY63
|
4.4
|
16.6
|
1.0
|
HB3
|
A:SER66
|
4.4
|
19.4
|
1.0
|
H
|
A:CYS68
|
4.6
|
18.6
|
1.0
|
O
|
A:GLY63
|
4.6
|
19.1
|
1.0
|
HH11
|
A:ARG98
|
4.6
|
21.9
|
1.0
|
SG
|
A:CYS96
|
4.6
|
16.2
|
1.0
|
HG23
|
A:VAL235
|
4.6
|
19.7
|
1.0
|
HB
|
A:VAL235
|
4.7
|
18.0
|
1.0
|
HA
|
A:CYS64
|
4.7
|
21.2
|
1.0
|
N
|
A:SER66
|
4.7
|
17.4
|
1.0
|
SG
|
A:CYS61
|
4.8
|
16.6
|
1.0
|
N
|
A:TRP67
|
4.8
|
17.4
|
1.0
|
SG
|
A:CYS68
|
4.8
|
16.9
|
1.0
|
CA
|
A:SER66
|
4.8
|
16.8
|
1.0
|
NE
|
A:ARG98
|
4.9
|
17.5
|
1.0
|
HB3
|
A:CYS61
|
4.9
|
19.2
|
1.0
|
HB2
|
A:ARG98
|
4.9
|
19.4
|
1.0
|
|
Iron binding site 2 out
of 40 in 6cz7
Go back to
Iron Binding Sites List in 6cz7
Iron binding site 2 out
of 40 in the The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe901
b:16.9
occ:1.00
|
FE2
|
A:SF4901
|
0.0
|
16.9
|
1.0
|
S1
|
A:SF4901
|
2.3
|
16.8
|
1.0
|
S4
|
A:SF4901
|
2.3
|
16.4
|
1.0
|
S3
|
A:SF4901
|
2.3
|
16.4
|
1.0
|
SG
|
A:CYS96
|
2.3
|
16.2
|
1.0
|
FE3
|
A:SF4901
|
2.7
|
16.7
|
1.0
|
FE1
|
A:SF4901
|
2.7
|
17.0
|
1.0
|
FE4
|
A:SF4901
|
2.7
|
16.9
|
1.0
|
HB3
|
A:CYS96
|
3.1
|
18.7
|
1.0
|
CB
|
A:CYS96
|
3.3
|
15.6
|
1.0
|
HB2
|
A:ARG98
|
3.4
|
19.4
|
1.0
|
HH21
|
A:ARG98
|
3.5
|
22.0
|
1.0
|
H
|
A:CYS96
|
3.6
|
17.9
|
1.0
|
NH2
|
A:ARG98
|
3.6
|
18.3
|
1.0
|
S2
|
A:SF4901
|
3.9
|
16.2
|
1.0
|
HH22
|
A:ARG98
|
3.9
|
22.0
|
1.0
|
CZ
|
A:ARG98
|
4.0
|
18.3
|
1.0
|
HB
|
A:VAL235
|
4.1
|
18.0
|
1.0
|
HE
|
A:ARG98
|
4.1
|
21.0
|
1.0
|
HB2
|
A:CYS96
|
4.1
|
18.7
|
1.0
|
H
|
A:ARG98
|
4.1
|
17.8
|
1.0
|
N
|
A:CYS96
|
4.2
|
14.9
|
1.0
|
CA
|
A:CYS96
|
4.2
|
14.7
|
1.0
|
NE
|
A:ARG98
|
4.2
|
17.5
|
1.0
|
HG
|
A:SER236
|
4.3
|
19.9
|
1.0
|
H
|
A:GLN99
|
4.3
|
19.3
|
1.0
|
CB
|
A:ARG98
|
4.4
|
16.2
|
1.0
|
OG
|
A:SER236
|
4.4
|
16.5
|
1.0
|
HZ3
|
A:LYS70
|
4.5
|
18.2
|
1.0
|
C
|
A:CYS96
|
4.5
|
15.4
|
1.0
|
HG
|
A:SER95
|
4.5
|
18.8
|
1.0
|
SG
|
A:CYS64
|
4.6
|
18.3
|
1.0
|
O
|
A:CYS96
|
4.6
|
15.7
|
1.0
|
HB3
|
A:GLN99
|
4.7
|
18.1
|
1.0
|
N
|
A:GLN99
|
4.7
|
16.1
|
1.0
|
NH1
|
A:ARG98
|
4.7
|
18.3
|
1.0
|
N
|
A:ARG98
|
4.8
|
14.8
|
1.0
|
HB3
|
A:ARG98
|
4.8
|
19.4
|
1.0
|
HB2
|
A:SER66
|
4.8
|
19.4
|
1.0
|
SG
|
A:CYS68
|
4.8
|
16.9
|
1.0
|
OG
|
A:SER95
|
4.8
|
15.7
|
1.0
|
SG
|
A:CYS61
|
4.9
|
16.6
|
1.0
|
HH12
|
A:ARG98
|
4.9
|
21.9
|
1.0
|
HA3
|
A:GLY63
|
5.0
|
22.6
|
1.0
|
CA
|
A:ARG98
|
5.0
|
14.6
|
1.0
|
CB
|
A:VAL235
|
5.0
|
15.0
|
1.0
|
|
Iron binding site 3 out
of 40 in 6cz7
Go back to
Iron Binding Sites List in 6cz7
Iron binding site 3 out
of 40 in the The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe901
b:16.7
occ:1.00
|
FE3
|
A:SF4901
|
0.0
|
16.7
|
1.0
|
S4
|
A:SF4901
|
2.2
|
16.4
|
1.0
|
S1
|
A:SF4901
|
2.3
|
16.8
|
1.0
|
S2
|
A:SF4901
|
2.3
|
16.2
|
1.0
|
SG
|
A:CYS68
|
2.4
|
16.9
|
1.0
|
FE4
|
A:SF4901
|
2.7
|
16.9
|
1.0
|
FE2
|
A:SF4901
|
2.7
|
16.9
|
1.0
|
FE1
|
A:SF4901
|
2.7
|
17.0
|
1.0
|
HB2
|
A:CYS68
|
2.9
|
19.9
|
1.0
|
HG
|
A:SER236
|
3.1
|
19.9
|
1.0
|
H
|
A:CYS68
|
3.2
|
18.6
|
1.0
|
CB
|
A:CYS68
|
3.2
|
16.6
|
1.0
|
HB2
|
A:SER66
|
3.2
|
19.4
|
1.0
|
OG
|
A:SER236
|
3.7
|
16.5
|
1.0
|
HB3
|
A:SER66
|
3.8
|
19.4
|
1.0
|
S3
|
A:SF4901
|
3.8
|
16.4
|
1.0
|
HB3
|
A:CYS61
|
3.8
|
19.2
|
1.0
|
HE2
|
A:LYS70
|
3.9
|
19.2
|
1.0
|
HB3
|
A:CYS68
|
3.9
|
19.9
|
1.0
|
N
|
A:CYS68
|
3.9
|
15.5
|
1.0
|
CB
|
A:SER66
|
3.9
|
16.2
|
1.0
|
HZ3
|
A:LYS70
|
4.2
|
18.2
|
1.0
|
CA
|
A:CYS68
|
4.2
|
15.1
|
1.0
|
H
|
A:CYS96
|
4.4
|
17.9
|
1.0
|
H
|
A:SER236
|
4.5
|
19.8
|
1.0
|
SG
|
A:CYS64
|
4.6
|
18.3
|
1.0
|
H
|
A:TRP67
|
4.6
|
20.9
|
1.0
|
CB
|
A:CYS61
|
4.7
|
16.0
|
1.0
|
HB3
|
A:CYS96
|
4.7
|
18.7
|
1.0
|
OG
|
A:SER66
|
4.7
|
17.3
|
1.0
|
CE
|
A:LYS70
|
4.7
|
16.0
|
1.0
|
HA
|
A:CYS68
|
4.7
|
18.1
|
1.0
|
SG
|
A:CYS61
|
4.7
|
16.6
|
1.0
|
HE22
|
A:GLN234
|
4.7
|
20.7
|
1.0
|
NZ
|
A:LYS70
|
4.7
|
15.2
|
1.0
|
HG
|
A:SER66
|
4.7
|
20.7
|
1.0
|
O
|
A:HOH1244
|
4.7
|
17.1
|
1.0
|
HZ2
|
A:LYS70
|
4.7
|
18.2
|
1.0
|
N
|
A:TRP67
|
4.8
|
17.4
|
1.0
|
HB2
|
A:SER236
|
4.8
|
19.3
|
1.0
|
CB
|
A:SER236
|
4.8
|
16.1
|
1.0
|
SG
|
A:CYS96
|
4.9
|
16.2
|
1.0
|
H
|
A:CYS64
|
4.9
|
22.1
|
1.0
|
HB
|
A:VAL235
|
4.9
|
18.0
|
1.0
|
C
|
A:SER66
|
4.9
|
17.6
|
1.0
|
HE3
|
A:LYS70
|
5.0
|
19.2
|
1.0
|
|
Iron binding site 4 out
of 40 in 6cz7
Go back to
Iron Binding Sites List in 6cz7
Iron binding site 4 out
of 40 in the The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe901
b:16.9
occ:1.00
|
FE4
|
A:SF4901
|
0.0
|
16.9
|
1.0
|
S3
|
A:SF4901
|
2.3
|
16.4
|
1.0
|
S2
|
A:SF4901
|
2.3
|
16.2
|
1.0
|
S1
|
A:SF4901
|
2.3
|
16.8
|
1.0
|
SG
|
A:CYS61
|
2.3
|
16.6
|
1.0
|
FE3
|
A:SF4901
|
2.7
|
16.7
|
1.0
|
FE1
|
A:SF4901
|
2.7
|
17.0
|
1.0
|
FE2
|
A:SF4901
|
2.7
|
16.9
|
1.0
|
HB3
|
A:CYS61
|
2.9
|
19.2
|
1.0
|
CB
|
A:CYS61
|
3.2
|
16.0
|
1.0
|
H
|
A:GLY63
|
3.2
|
19.9
|
1.0
|
HA3
|
A:GLY63
|
3.6
|
22.6
|
1.0
|
HB2
|
A:CYS61
|
3.7
|
19.2
|
1.0
|
HE3
|
A:LYS729
|
3.8
|
23.1
|
1.0
|
N
|
A:GLY63
|
3.9
|
16.6
|
1.0
|
S4
|
A:SF4901
|
3.9
|
16.4
|
1.0
|
H
|
A:CYS64
|
3.9
|
22.1
|
1.0
|
HE2
|
A:LYS70
|
3.9
|
19.2
|
1.0
|
HB2
|
A:CYS68
|
4.1
|
19.9
|
1.0
|
CA
|
A:GLY63
|
4.2
|
18.8
|
1.0
|
HE3
|
A:LYS70
|
4.3
|
19.2
|
1.0
|
H
|
A:CYS68
|
4.3
|
18.6
|
1.0
|
HA
|
A:GLN99
|
4.4
|
19.4
|
1.0
|
CA
|
A:CYS61
|
4.4
|
15.6
|
1.0
|
C
|
A:CYS61
|
4.4
|
17.2
|
1.0
|
HB2
|
A:ARG98
|
4.5
|
19.4
|
1.0
|
HZ3
|
A:LYS70
|
4.5
|
18.2
|
1.0
|
N
|
A:CYS64
|
4.5
|
18.4
|
1.0
|
CE
|
A:LYS70
|
4.5
|
16.0
|
1.0
|
N
|
A:GLN62
|
4.6
|
16.8
|
1.0
|
HB3
|
A:GLN99
|
4.6
|
18.1
|
1.0
|
H
|
A:GLN62
|
4.7
|
20.1
|
1.0
|
C
|
A:GLY63
|
4.7
|
18.8
|
1.0
|
CE
|
A:LYS729
|
4.7
|
19.2
|
1.0
|
O
|
A:CYS61
|
4.8
|
17.6
|
1.0
|
SG
|
A:CYS68
|
4.8
|
16.9
|
1.0
|
SG
|
A:CYS96
|
4.8
|
16.2
|
1.0
|
HA
|
A:CYS61
|
4.8
|
18.7
|
1.0
|
HE2
|
A:LYS729
|
4.9
|
23.1
|
1.0
|
CB
|
A:CYS68
|
4.9
|
16.6
|
1.0
|
HB2
|
A:SER66
|
4.9
|
19.4
|
1.0
|
C
|
A:GLN62
|
4.9
|
16.9
|
1.0
|
N
|
A:GLN99
|
5.0
|
16.1
|
1.0
|
H
|
A:GLN99
|
5.0
|
19.3
|
1.0
|
|
Iron binding site 5 out
of 40 in 6cz7
Go back to
Iron Binding Sites List in 6cz7
Iron binding site 5 out
of 40 in the The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe301
b:18.1
occ:1.00
|
FE1
|
B:SF4301
|
0.0
|
18.1
|
1.0
|
S4
|
B:SF4301
|
2.3
|
18.3
|
1.0
|
S3
|
B:SF4301
|
2.3
|
18.9
|
1.0
|
S2
|
B:SF4301
|
2.3
|
17.5
|
1.0
|
SG
|
B:CYS15
|
2.4
|
18.0
|
1.0
|
FE4
|
B:SF4301
|
2.7
|
18.5
|
1.0
|
FE3
|
B:SF4301
|
2.7
|
18.2
|
1.0
|
FE2
|
B:SF4301
|
2.7
|
18.7
|
1.0
|
H
|
B:CYS15
|
2.8
|
20.1
|
1.0
|
H
|
B:GLY17
|
3.3
|
19.2
|
1.0
|
HD2
|
B:PRO184
|
3.4
|
20.2
|
1.0
|
H
|
B:GLY16
|
3.5
|
20.7
|
1.0
|
N
|
B:CYS15
|
3.6
|
16.8
|
1.0
|
HG22
|
B:VAL13
|
3.7
|
21.6
|
1.0
|
CB
|
B:CYS15
|
3.7
|
17.9
|
1.0
|
H
|
B:VAL13
|
3.9
|
19.5
|
1.0
|
S1
|
B:SF4301
|
3.9
|
18.5
|
1.0
|
HB3
|
B:CYS15
|
4.0
|
21.5
|
1.0
|
N
|
B:GLY16
|
4.0
|
17.2
|
1.0
|
H
|
B:CYS18
|
4.0
|
20.1
|
1.0
|
H
|
B:GLY14
|
4.0
|
20.7
|
1.0
|
O
|
B:HOH589
|
4.0
|
53.5
|
1.0
|
N
|
B:GLY17
|
4.1
|
16.0
|
1.0
|
CA
|
B:CYS15
|
4.1
|
17.6
|
1.0
|
HG23
|
B:VAL13
|
4.2
|
21.6
|
1.0
|
CD
|
B:PRO184
|
4.3
|
16.9
|
1.0
|
HD3
|
B:PRO184
|
4.4
|
20.2
|
1.0
|
C
|
B:CYS15
|
4.4
|
17.3
|
1.0
|
CG2
|
B:VAL13
|
4.4
|
18.0
|
1.0
|
N
|
B:GLY14
|
4.4
|
17.2
|
1.0
|
HA3
|
B:GLY17
|
4.5
|
19.2
|
1.0
|
HA
|
B:CYS183
|
4.5
|
18.7
|
1.0
|
HB2
|
B:CYS15
|
4.5
|
21.5
|
1.0
|
HG3
|
B:PRO184
|
4.7
|
21.9
|
1.0
|
C
|
B:GLY14
|
4.7
|
16.2
|
1.0
|
HG2
|
B:PRO184
|
4.7
|
21.9
|
1.0
|
N
|
B:VAL13
|
4.7
|
16.2
|
1.0
|
SG
|
B:CYS18
|
4.7
|
18.7
|
1.0
|
SG
|
B:CYS12
|
4.8
|
17.0
|
1.0
|
N
|
B:CYS18
|
4.8
|
16.7
|
1.0
|
HA
|
B:CYS12
|
4.8
|
18.9
|
1.0
|
CA
|
B:GLY17
|
4.8
|
16.0
|
1.0
|
HA2
|
B:GLY14
|
4.8
|
19.7
|
1.0
|
O
|
A:HOH1250
|
4.8
|
17.7
|
1.0
|
CG
|
B:PRO184
|
4.8
|
18.2
|
1.0
|
SG
|
B:CYS183
|
4.8
|
17.7
|
1.0
|
CA
|
B:GLY16
|
4.9
|
15.9
|
1.0
|
CA
|
B:GLY14
|
4.9
|
16.4
|
1.0
|
C
|
B:GLY16
|
4.9
|
16.7
|
1.0
|
HG21
|
B:VAL13
|
4.9
|
21.6
|
1.0
|
HA2
|
B:GLY16
|
5.0
|
19.0
|
1.0
|
|
Iron binding site 6 out
of 40 in 6cz7
Go back to
Iron Binding Sites List in 6cz7
Iron binding site 6 out
of 40 in the The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe301
b:18.7
occ:1.00
|
FE2
|
B:SF4301
|
0.0
|
18.7
|
1.0
|
S3
|
B:SF4301
|
2.3
|
18.9
|
1.0
|
S1
|
B:SF4301
|
2.3
|
18.5
|
1.0
|
S4
|
B:SF4301
|
2.3
|
18.3
|
1.0
|
SG
|
B:CYS12
|
2.3
|
17.0
|
1.0
|
FE3
|
B:SF4301
|
2.7
|
18.2
|
1.0
|
FE4
|
B:SF4301
|
2.7
|
18.5
|
1.0
|
FE1
|
B:SF4301
|
2.7
|
18.1
|
1.0
|
HA
|
B:CYS12
|
3.1
|
18.9
|
1.0
|
H
|
B:GLY14
|
3.2
|
20.7
|
1.0
|
CB
|
B:CYS12
|
3.3
|
17.1
|
1.0
|
H
|
B:VAL13
|
3.3
|
19.5
|
1.0
|
HB2
|
B:CYS12
|
3.4
|
20.5
|
1.0
|
HG3
|
B:PRO54
|
3.4
|
23.1
|
1.0
|
CA
|
B:CYS12
|
3.7
|
15.8
|
1.0
|
O
|
B:HOH589
|
3.8
|
53.5
|
1.0
|
S2
|
B:SF4301
|
3.9
|
17.5
|
1.0
|
N
|
B:VAL13
|
3.9
|
16.2
|
1.0
|
HG2
|
B:PRO54
|
3.9
|
23.1
|
1.0
|
N
|
B:GLY14
|
3.9
|
17.2
|
1.0
|
H
|
B:CYS15
|
4.0
|
20.1
|
1.0
|
CG
|
B:PRO54
|
4.1
|
19.3
|
1.0
|
HA2
|
B:GLY14
|
4.1
|
19.7
|
1.0
|
HE1
|
B:TYR52
|
4.2
|
21.6
|
1.0
|
HB3
|
B:CYS12
|
4.2
|
20.5
|
1.0
|
C
|
B:CYS12
|
4.2
|
15.8
|
1.0
|
HB3
|
B:ALA187
|
4.3
|
23.0
|
1.0
|
CA
|
B:GLY14
|
4.6
|
16.4
|
1.0
|
HG22
|
B:VAL13
|
4.6
|
21.6
|
1.0
|
HD1
|
B:TYR52
|
4.7
|
19.8
|
1.0
|
CE1
|
B:TYR52
|
4.7
|
18.0
|
1.0
|
H
|
B:GLY16
|
4.7
|
20.7
|
1.0
|
N
|
B:CYS15
|
4.7
|
16.8
|
1.0
|
SG
|
B:CYS183
|
4.8
|
17.7
|
1.0
|
HH11
|
B:ARG188
|
4.8
|
20.7
|
1.0
|
HB3
|
B:PRO54
|
4.9
|
21.6
|
1.0
|
C
|
B:VAL13
|
4.9
|
18.4
|
1.0
|
SG
|
B:CYS18
|
4.9
|
18.7
|
1.0
|
HB2
|
B:ALA187
|
4.9
|
23.0
|
1.0
|
N
|
B:CYS12
|
4.9
|
15.9
|
1.0
|
HD3
|
B:PRO54
|
5.0
|
21.0
|
1.0
|
CD1
|
B:TYR52
|
5.0
|
16.5
|
1.0
|
CA
|
B:VAL13
|
5.0
|
17.6
|
1.0
|
CB
|
B:ALA187
|
5.0
|
19.1
|
1.0
|
|
Iron binding site 7 out
of 40 in 6cz7
Go back to
Iron Binding Sites List in 6cz7
Iron binding site 7 out
of 40 in the The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe301
b:18.2
occ:1.00
|
FE3
|
B:SF4301
|
0.0
|
18.2
|
1.0
|
S2
|
B:SF4301
|
2.3
|
17.5
|
1.0
|
S1
|
B:SF4301
|
2.3
|
18.5
|
1.0
|
S4
|
B:SF4301
|
2.3
|
18.3
|
1.0
|
SG
|
B:CYS183
|
2.4
|
17.7
|
1.0
|
FE2
|
B:SF4301
|
2.7
|
18.7
|
1.0
|
FE4
|
B:SF4301
|
2.7
|
18.5
|
1.0
|
FE1
|
B:SF4301
|
2.7
|
18.1
|
1.0
|
HD2
|
B:PRO184
|
3.1
|
20.2
|
1.0
|
HB2
|
B:CYS183
|
3.1
|
20.4
|
1.0
|
CB
|
B:CYS183
|
3.3
|
17.0
|
1.0
|
HA
|
B:CYS183
|
3.3
|
18.7
|
1.0
|
HB3
|
B:ALA187
|
3.5
|
23.0
|
1.0
|
HD2
|
B:ARG188
|
3.7
|
26.6
|
1.0
|
CA
|
B:CYS183
|
3.8
|
15.6
|
1.0
|
S3
|
B:SF4301
|
3.8
|
18.9
|
1.0
|
CD
|
B:PRO184
|
4.0
|
16.9
|
1.0
|
HG3
|
B:ARG188
|
4.1
|
22.9
|
1.0
|
HA
|
B:CYS12
|
4.1
|
18.9
|
1.0
|
HB3
|
B:CYS183
|
4.1
|
20.4
|
1.0
|
HB3
|
B:CYS18
|
4.3
|
22.4
|
1.0
|
HB2
|
B:ALA187
|
4.3
|
23.0
|
1.0
|
CB
|
B:ALA187
|
4.4
|
19.1
|
1.0
|
H
|
B:ALA187
|
4.4
|
20.5
|
1.0
|
H
|
B:SER185
|
4.5
|
19.9
|
1.0
|
HD3
|
B:PRO184
|
4.5
|
20.2
|
1.0
|
C
|
B:CYS183
|
4.5
|
16.1
|
1.0
|
CD
|
B:ARG188
|
4.5
|
22.2
|
1.0
|
HG
|
B:SER185
|
4.5
|
21.9
|
1.0
|
N
|
B:PRO184
|
4.6
|
16.5
|
1.0
|
H
|
B:VAL13
|
4.6
|
19.5
|
1.0
|
OG
|
B:SER185
|
4.6
|
18.3
|
1.0
|
HD3
|
B:ARG188
|
4.6
|
26.6
|
1.0
|
HH11
|
B:ARG188
|
4.6
|
20.7
|
1.0
|
H
|
B:CYS18
|
4.7
|
20.1
|
1.0
|
HG2
|
B:PRO184
|
4.7
|
21.9
|
1.0
|
CG
|
B:ARG188
|
4.8
|
19.1
|
1.0
|
SG
|
B:CYS12
|
4.8
|
17.0
|
1.0
|
SG
|
B:CYS18
|
4.9
|
18.7
|
1.0
|
SG
|
B:CYS15
|
4.9
|
18.0
|
1.0
|
O
|
B:HOH589
|
4.9
|
53.5
|
1.0
|
HB2
|
B:CYS12
|
4.9
|
20.5
|
1.0
|
HB1
|
B:ALA187
|
4.9
|
23.0
|
1.0
|
N
|
B:CYS183
|
4.9
|
16.4
|
1.0
|
CG
|
B:PRO184
|
5.0
|
18.2
|
1.0
|
HG22
|
B:VAL13
|
5.0
|
21.6
|
1.0
|
|
Iron binding site 8 out
of 40 in 6cz7
Go back to
Iron Binding Sites List in 6cz7
Iron binding site 8 out
of 40 in the The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe301
b:18.5
occ:1.00
|
FE4
|
B:SF4301
|
0.0
|
18.5
|
1.0
|
S2
|
B:SF4301
|
2.3
|
17.5
|
1.0
|
S1
|
B:SF4301
|
2.3
|
18.5
|
1.0
|
S3
|
B:SF4301
|
2.3
|
18.9
|
1.0
|
O
|
B:HOH589
|
2.4
|
53.5
|
1.0
|
SG
|
B:CYS18
|
2.4
|
18.7
|
1.0
|
FE3
|
B:SF4301
|
2.7
|
18.2
|
1.0
|
FE2
|
B:SF4301
|
2.7
|
18.7
|
1.0
|
FE1
|
B:SF4301
|
2.7
|
18.1
|
1.0
|
H
|
B:CYS18
|
3.0
|
20.1
|
1.0
|
HB3
|
B:CYS18
|
3.0
|
22.4
|
1.0
|
CB
|
B:CYS18
|
3.3
|
18.6
|
1.0
|
HH11
|
B:ARG188
|
3.5
|
20.7
|
1.0
|
HD2
|
B:ARG188
|
3.6
|
26.6
|
1.0
|
N
|
B:CYS18
|
3.8
|
16.7
|
1.0
|
S4
|
B:SF4301
|
3.9
|
18.3
|
1.0
|
HG3
|
B:PRO54
|
4.0
|
23.1
|
1.0
|
HB2
|
B:CYS18
|
4.0
|
22.4
|
1.0
|
H
|
B:GLY16
|
4.1
|
20.7
|
1.0
|
NH1
|
B:ARG188
|
4.1
|
17.2
|
1.0
|
HB3
|
B:PRO54
|
4.1
|
21.6
|
1.0
|
H
|
B:GLY17
|
4.1
|
19.2
|
1.0
|
CA
|
B:CYS18
|
4.2
|
18.6
|
1.0
|
HH12
|
B:ARG188
|
4.3
|
20.7
|
1.0
|
HE1
|
B:TYR52
|
4.3
|
21.6
|
1.0
|
O
|
B:HOH434
|
4.4
|
19.8
|
1.0
|
N
|
B:GLY17
|
4.5
|
16.0
|
1.0
|
HG2
|
B:PRO54
|
4.5
|
23.1
|
1.0
|
HH
|
B:TYR52
|
4.5
|
27.1
|
1.0
|
CD
|
B:ARG188
|
4.5
|
22.2
|
1.0
|
HB2
|
B:CYS183
|
4.6
|
20.4
|
1.0
|
HA2
|
B:GLY16
|
4.6
|
19.0
|
1.0
|
CG
|
B:PRO54
|
4.6
|
19.3
|
1.0
|
N
|
B:GLY16
|
4.7
|
17.2
|
1.0
|
H
|
B:CYS15
|
4.7
|
20.1
|
1.0
|
HA
|
B:CYS18
|
4.8
|
22.3
|
1.0
|
SG
|
B:CYS15
|
4.8
|
18.0
|
1.0
|
CB
|
B:PRO54
|
4.8
|
18.0
|
1.0
|
HA
|
B:CYS183
|
4.8
|
18.7
|
1.0
|
H
|
B:SER19
|
4.8
|
19.5
|
1.0
|
SG
|
B:CYS12
|
4.8
|
17.0
|
1.0
|
SG
|
B:CYS183
|
4.9
|
17.7
|
1.0
|
C
|
B:GLY16
|
4.9
|
16.7
|
1.0
|
C
|
B:GLY17
|
4.9
|
17.2
|
1.0
|
CZ
|
B:ARG188
|
4.9
|
16.6
|
1.0
|
HD3
|
B:ARG188
|
4.9
|
26.6
|
1.0
|
CA
|
B:GLY16
|
4.9
|
15.9
|
1.0
|
HD2
|
B:PRO184
|
5.0
|
20.2
|
1.0
|
|
Iron binding site 9 out
of 40 in 6cz7
Go back to
Iron Binding Sites List in 6cz7
Iron binding site 9 out
of 40 in the The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe302
b:15.9
occ:1.00
|
FE1
|
B:SF4302
|
0.0
|
15.9
|
1.0
|
S3
|
B:SF4302
|
2.3
|
16.3
|
1.0
|
S2
|
B:SF4302
|
2.3
|
16.2
|
1.0
|
S4
|
B:SF4302
|
2.3
|
16.2
|
1.0
|
SG
|
B:CYS167
|
2.3
|
16.1
|
1.0
|
FE3
|
B:SF4302
|
2.7
|
16.5
|
1.0
|
FE2
|
B:SF4302
|
2.7
|
16.0
|
1.0
|
FE4
|
B:SF4302
|
2.7
|
16.0
|
1.0
|
H
|
B:CYS167
|
3.0
|
19.1
|
1.0
|
N
|
B:CYS167
|
3.3
|
15.9
|
1.0
|
CB
|
B:CYS167
|
3.3
|
15.1
|
1.0
|
HB2
|
B:CYS167
|
3.4
|
18.2
|
1.0
|
HB3
|
B:PRO177
|
3.4
|
21.8
|
1.0
|
HD21
|
B:ASN26
|
3.4
|
20.5
|
1.0
|
CA
|
B:CYS167
|
3.7
|
14.8
|
1.0
|
HA
|
B:CYS167
|
3.8
|
17.7
|
1.0
|
S1
|
B:SF4302
|
3.9
|
16.3
|
1.0
|
H
|
B:ALA178
|
3.9
|
20.6
|
1.0
|
HA
|
B:PHE166
|
3.9
|
21.4
|
1.0
|
C
|
B:PHE166
|
4.0
|
17.6
|
1.0
|
ND2
|
B:ASN26
|
4.1
|
17.1
|
1.0
|
H
|
B:CYS179
|
4.1
|
20.7
|
1.0
|
HB3
|
B:CYS167
|
4.2
|
18.2
|
1.0
|
CB
|
B:PRO177
|
4.3
|
18.2
|
1.0
|
HA
|
B:PRO177
|
4.3
|
20.9
|
1.0
|
HD22
|
B:ASN26
|
4.3
|
20.5
|
1.0
|
CA
|
B:PHE166
|
4.4
|
17.9
|
1.0
|
H
|
B:PHE166
|
4.4
|
21.3
|
1.0
|
HB3
|
B:ALA178
|
4.4
|
21.1
|
1.0
|
N
|
B:ALA178
|
4.5
|
17.2
|
1.0
|
SG
|
B:CYS179
|
4.5
|
17.5
|
1.0
|
N
|
B:PHE166
|
4.6
|
17.8
|
1.0
|
HB2
|
B:PRO177
|
4.6
|
21.8
|
1.0
|
HG2
|
B:GLU25
|
4.7
|
19.5
|
1.0
|
O
|
B:PHE166
|
4.7
|
17.2
|
1.0
|
CA
|
B:PRO177
|
4.7
|
17.4
|
1.0
|
H
|
B:THR165
|
4.8
|
19.2
|
1.0
|
SG
|
B:CYS22
|
4.8
|
16.0
|
1.0
|
SG
|
B:CYS164
|
4.9
|
15.8
|
1.0
|
HE3
|
B:TRP34
|
4.9
|
18.2
|
1.0
|
HB3
|
B:CYS179
|
4.9
|
20.7
|
1.0
|
N
|
B:CYS179
|
5.0
|
17.3
|
1.0
|
HA
|
B:CYS22
|
5.0
|
18.5
|
1.0
|
|
Iron binding site 10 out
of 40 in 6cz7
Go back to
Iron Binding Sites List in 6cz7
Iron binding site 10 out
of 40 in the The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of The Arsenate Respiratory Reductase (Arr) Complex From Shewanella Sp. Ana-3 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe302
b:16.0
occ:1.00
|
FE2
|
B:SF4302
|
0.0
|
16.0
|
1.0
|
S4
|
B:SF4302
|
2.2
|
16.2
|
1.0
|
S1
|
B:SF4302
|
2.3
|
16.3
|
1.0
|
S3
|
B:SF4302
|
2.3
|
16.3
|
1.0
|
SG
|
B:CYS22
|
2.4
|
16.0
|
1.0
|
FE4
|
B:SF4302
|
2.7
|
16.0
|
1.0
|
FE3
|
B:SF4302
|
2.7
|
16.5
|
1.0
|
FE1
|
B:SF4302
|
2.7
|
15.9
|
1.0
|
HB2
|
B:CYS22
|
2.9
|
18.4
|
1.0
|
CB
|
B:CYS22
|
3.2
|
15.3
|
1.0
|
HD22
|
B:ASN26
|
3.3
|
20.5
|
1.0
|
HD21
|
B:ASN26
|
3.4
|
20.5
|
1.0
|
HE3
|
B:TRP34
|
3.6
|
18.2
|
1.0
|
ND2
|
B:ASN26
|
3.7
|
17.1
|
1.0
|
HA
|
B:CYS22
|
3.7
|
18.5
|
1.0
|
HB2
|
B:SER35
|
3.7
|
21.4
|
1.0
|
HB2
|
B:TRP34
|
3.8
|
18.3
|
1.0
|
S2
|
B:SF4302
|
3.9
|
16.2
|
1.0
|
HB3
|
B:CYS22
|
4.0
|
18.4
|
1.0
|
CA
|
B:CYS22
|
4.1
|
15.4
|
1.0
|
HB2
|
B:CYS164
|
4.2
|
18.2
|
1.0
|
H
|
B:SER35
|
4.2
|
20.7
|
1.0
|
HB3
|
B:TRP34
|
4.3
|
18.3
|
1.0
|
HB3
|
B:CYS179
|
4.3
|
20.7
|
1.0
|
HA
|
B:CYS164
|
4.3
|
18.4
|
1.0
|
HB3
|
B:SER35
|
4.4
|
21.4
|
1.0
|
CB
|
B:SER35
|
4.5
|
17.9
|
1.0
|
CE3
|
B:TRP34
|
4.5
|
15.2
|
1.0
|
CB
|
B:TRP34
|
4.5
|
15.3
|
1.0
|
N
|
B:SER35
|
4.6
|
17.2
|
1.0
|
SG
|
B:CYS167
|
4.6
|
16.1
|
1.0
|
SG
|
B:CYS164
|
4.7
|
15.8
|
1.0
|
CB
|
B:CYS164
|
4.8
|
15.2
|
1.0
|
H
|
B:CYS179
|
4.9
|
20.7
|
1.0
|
SG
|
B:CYS179
|
4.9
|
17.5
|
1.0
|
CG
|
B:ASN26
|
4.9
|
17.1
|
1.0
|
|
Reference:
N.R.Glasser,
P.H.Oyala,
T.H.Osborne,
J.M.Santini,
D.K.Newman.
Structural and Mechanistic Analysis of the Arsenate Respiratory Reductase Provides Insight Into Environmental Arsenic Transformations. Proc. Natl. Acad. Sci. V. 115 E8614 2018U.S.A..
ISSN: ESSN 1091-6490
PubMed: 30104376
DOI: 10.1073/PNAS.1807984115
Page generated: Tue Aug 6 16:04:56 2024
|