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Iron in PDB 6dcd: Mycobacterium Marinum Cytochrome P450 CYP150A6 in the Substrate-Free Form

Protein crystallography data

The structure of Mycobacterium Marinum Cytochrome P450 CYP150A6 in the Substrate-Free Form, PDB code: 6dcd was solved by S.A.Child, J.B.Bruning, S.G.Bell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.47 / 1.55
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 80.570, 80.570, 134.760, 90.00, 90.00, 120.00
R / Rfree (%) 22.2 / 24.6

Iron Binding Sites:

The binding sites of Iron atom in the Mycobacterium Marinum Cytochrome P450 CYP150A6 in the Substrate-Free Form (pdb code 6dcd). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Mycobacterium Marinum Cytochrome P450 CYP150A6 in the Substrate-Free Form, PDB code: 6dcd:

Iron binding site 1 out of 1 in 6dcd

Go back to Iron Binding Sites List in 6dcd
Iron binding site 1 out of 1 in the Mycobacterium Marinum Cytochrome P450 CYP150A6 in the Substrate-Free Form


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Mycobacterium Marinum Cytochrome P450 CYP150A6 in the Substrate-Free Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:23.2
occ:1.00
FE A:HEM501 0.0 23.2 1.0
NB A:HEM501 2.0 20.3 1.0
ND A:HEM501 2.0 22.1 1.0
NA A:HEM501 2.1 22.4 1.0
NC A:HEM501 2.1 24.4 1.0
O A:HOH649 2.2 22.5 1.0
SG A:CYS363 2.3 10.1 1.0
C1B A:HEM501 3.0 22.1 1.0
C4B A:HEM501 3.1 22.9 1.0
C4D A:HEM501 3.1 22.4 1.0
C1D A:HEM501 3.1 26.0 1.0
C1C A:HEM501 3.1 23.3 1.0
C4C A:HEM501 3.1 23.1 1.0
C1A A:HEM501 3.1 21.1 1.0
C4A A:HEM501 3.1 23.3 1.0
CB A:CYS363 3.4 9.9 1.0
CHA A:HEM501 3.4 22.7 1.0
CHC A:HEM501 3.4 22.2 1.0
CHB A:HEM501 3.4 20.7 1.0
CHD A:HEM501 3.4 24.4 1.0
O A:HOH892 4.0 46.3 1.0
O A:ALA252 4.2 21.5 1.0
CA A:CYS363 4.2 10.2 1.0
C2B A:HEM501 4.3 22.2 1.0
C2C A:HEM501 4.3 24.2 1.0
C3C A:HEM501 4.3 28.2 1.0
C3B A:HEM501 4.3 23.6 1.0
C3D A:HEM501 4.3 21.4 1.0
C2D A:HEM501 4.3 23.1 1.0
C2A A:HEM501 4.3 23.4 1.0
C3A A:HEM501 4.3 22.3 1.0
O A:HOH930 4.5 49.4 1.0
CB A:ALA252 4.7 23.4 1.0
CD A:PRO364 4.9 14.5 1.0
C A:ALA252 4.9 20.2 1.0
N A:GLY365 4.9 10.9 1.0
C A:CYS363 4.9 11.9 1.0

Reference:

S.A.Child, K.L.Flint, J.B.Bruning, S.G.Bell. The Characterisation of Two Members of the Cytochrome P450 CYP150 Family: CYP150A5 and CYP150A6 From Mycobacterium Marinum. Biochim Biophys Acta Gen V.1863 925 2019SUBJ.
ISSN: ISSN 1872-8006
PubMed: 30826435
DOI: 10.1016/J.BBAGEN.2019.02.016
Page generated: Tue Aug 6 16:24:30 2024

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