Iron in PDB 6e1c: Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis

Protein crystallography data

The structure of Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis, PDB code: 6e1c was solved by L.M.K.Dassama, A.C.Rosenzweig, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.88 / 2.62
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 71.557, 85.757, 133.600, 90.00, 90.00, 90.00
R / Rfree (%) 19.8 / 27.8

Other elements in 6e1c:

The structure of Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis (pdb code 6e1c). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis, PDB code: 6e1c:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in 6e1c

Go back to Iron Binding Sites List in 6e1c
Iron binding site 1 out of 4 in the Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe401

b:14.9
occ:1.00
FE A:HEC401 0.0 14.9 1.0
NA A:HEC401 2.1 13.6 1.0
NB A:HEC401 2.1 14.5 1.0
ND A:HEC401 2.1 12.9 1.0
NC A:HEC401 2.1 14.1 1.0
NE2 A:HIS227 2.2 12.7 1.0
OH A:TYR312 2.4 26.8 1.0
C4A A:HEC401 3.1 13.8 1.0
C1D A:HEC401 3.1 12.6 1.0
CD2 A:HIS227 3.1 13.5 1.0
C1A A:HEC401 3.1 13.0 1.0
C4B A:HEC401 3.1 14.6 1.0
C4C A:HEC401 3.1 14.1 1.0
C4D A:HEC401 3.1 12.3 1.0
C1B A:HEC401 3.1 14.6 1.0
C1C A:HEC401 3.1 14.7 1.0
CZ A:TYR312 3.2 26.9 1.0
CE1 A:HIS227 3.2 13.1 1.0
CHD A:HEC401 3.4 12.9 1.0
CHB A:HEC401 3.4 14.3 1.0
CHA A:HEC401 3.4 12.7 1.0
CHC A:HEC401 3.5 14.6 1.0
CE2 A:TYR312 3.8 26.1 1.0
CE1 A:TYR312 4.0 27.2 1.0
CG A:HIS227 4.3 13.8 1.0
ND1 A:HIS227 4.3 13.5 1.0
C3B A:HEC401 4.4 15.3 1.0
C3A A:HEC401 4.4 13.0 1.0
C3C A:HEC401 4.4 15.1 1.0
C3D A:HEC401 4.4 11.8 1.0
C2D A:HEC401 4.4 12.3 1.0
C2A A:HEC401 4.4 12.9 1.0
C2B A:HEC401 4.4 15.2 1.0
C2C A:HEC401 4.4 15.1 1.0
CD2 A:TYR312 5.0 26.4 1.0

Iron binding site 2 out of 4 in 6e1c

Go back to Iron Binding Sites List in 6e1c
Iron binding site 2 out of 4 in the Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe402

b:10.1
occ:1.00
FE A:HEC402 0.0 10.1 1.0
NC A:HEC402 2.1 9.2 1.0
ND A:HEC402 2.1 9.2 1.0
NB A:HEC402 2.1 9.3 1.0
NA A:HEC402 2.1 9.8 1.0
NE2 A:HIS74 2.3 6.4 1.0
C4B A:HEC402 3.0 9.1 1.0
C1C A:HEC402 3.0 9.1 1.0
C4D A:HEC402 3.0 9.7 1.0
C4C A:HEC402 3.1 9.3 1.0
C1A A:HEC402 3.1 10.2 1.0
C1D A:HEC402 3.1 9.5 1.0
C4A A:HEC402 3.1 10.0 1.0
C1B A:HEC402 3.1 9.3 1.0
CD2 A:HIS74 3.3 6.6 1.0
CE1 A:HIS74 3.3 6.5 1.0
CHC A:HEC402 3.3 9.1 1.0
CHA A:HEC402 3.4 9.6 1.0
CHB A:HEC402 3.4 9.6 1.0
CHD A:HEC402 3.4 9.4 1.0
C3B A:HEC402 4.3 9.2 1.0
CG A:PRO128 4.3 11.9 1.0
C3C A:HEC402 4.3 9.5 1.0
C2C A:HEC402 4.4 9.4 1.0
C3D A:HEC402 4.4 9.6 1.0
C2D A:HEC402 4.4 9.5 1.0
C2B A:HEC402 4.4 9.2 1.0
ND1 A:HIS74 4.4 6.8 1.0
C2A A:HEC402 4.4 11.4 1.0
C3A A:HEC402 4.4 10.8 1.0
CG A:HIS74 4.4 6.8 1.0
OE2 A:GLU136 4.6 24.4 1.0
CB A:PRO128 4.7 11.8 1.0
NE2 A:GLN124 4.8 14.1 1.0

Iron binding site 3 out of 4 in 6e1c

Go back to Iron Binding Sites List in 6e1c
Iron binding site 3 out of 4 in the Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe401

b:17.7
occ:1.00
FE B:HEC401 0.0 17.7 1.0
NB B:HEC401 2.1 15.9 1.0
NC B:HEC401 2.1 15.8 1.0
NA B:HEC401 2.1 17.1 1.0
ND B:HEC401 2.1 16.6 1.0
NE2 B:HIS74 2.4 7.9 1.0
C4B B:HEC401 3.0 15.2 1.0
C1B B:HEC401 3.1 15.3 1.0
C4D B:HEC401 3.1 17.3 1.0
C4C B:HEC401 3.1 15.7 1.0
C1D B:HEC401 3.1 16.6 1.0
C1C B:HEC401 3.1 15.4 1.0
C1A B:HEC401 3.1 17.9 1.0
C4A B:HEC401 3.1 16.6 1.0
CHC B:HEC401 3.4 14.7 1.0
CE1 B:HIS74 3.4 8.1 1.0
CD2 B:HIS74 3.4 8.3 1.0
CHA B:HEC401 3.4 17.9 1.0
CHD B:HEC401 3.4 16.2 1.0
CHB B:HEC401 3.4 15.2 1.0
C3B B:HEC401 4.3 15.4 1.0
C3C B:HEC401 4.4 16.0 1.0
C2B B:HEC401 4.4 15.6 1.0
C2D B:HEC401 4.4 17.5 1.0
C3D B:HEC401 4.4 18.3 1.0
C2A B:HEC401 4.4 18.9 1.0
C3A B:HEC401 4.4 18.0 1.0
C2C B:HEC401 4.4 15.6 1.0
ND1 B:HIS74 4.5 8.2 1.0
CG B:HIS74 4.5 8.5 1.0
CG B:PRO128 4.6 29.0 1.0
NE2 B:GLN124 4.7 29.5 1.0

Iron binding site 4 out of 4 in 6e1c

Go back to Iron Binding Sites List in 6e1c
Iron binding site 4 out of 4 in the Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe402

b:19.9
occ:1.00
FE B:HEC402 0.0 19.9 1.0
NB B:HEC402 2.1 18.7 1.0
NA B:HEC402 2.1 17.8 1.0
ND B:HEC402 2.1 18.3 1.0
NC B:HEC402 2.1 19.9 1.0
NE2 B:HIS227 2.2 26.6 1.0
OH B:TYR312 2.3 25.9 1.0
C4B B:HEC402 3.1 18.7 1.0
C1B B:HEC402 3.1 18.8 1.0
C4A B:HEC402 3.1 17.1 1.0
C1A B:HEC402 3.1 17.8 1.0
C4D B:HEC402 3.1 18.2 1.0
C4C B:HEC402 3.1 19.6 1.0
C1C B:HEC402 3.1 20.4 1.0
C1D B:HEC402 3.1 19.3 1.0
CE1 B:HIS227 3.2 26.6 1.0
CD2 B:HIS227 3.2 28.1 1.0
CZ B:TYR312 3.2 24.4 1.0
CHB B:HEC402 3.4 18.4 1.0
CHA B:HEC402 3.4 17.7 1.0
CHC B:HEC402 3.5 19.7 1.0
CHD B:HEC402 3.5 19.3 1.0
CE2 B:TYR312 3.8 23.8 1.0
CE1 B:TYR312 4.0 24.5 1.0
ND1 B:HIS227 4.3 27.7 1.0
CG B:HIS227 4.3 29.4 1.0
C3B B:HEC402 4.4 18.4 1.0
C3C B:HEC402 4.4 20.8 1.0
C3A B:HEC402 4.4 16.9 1.0
C2A B:HEC402 4.4 16.9 1.0
C3D B:HEC402 4.4 19.6 1.0
C2B B:HEC402 4.4 18.1 1.0
C2C B:HEC402 4.4 21.0 1.0
C2D B:HEC402 4.4 19.8 1.0
CD2 B:TYR312 5.0 22.9 1.0

Reference:

L.M.K.Dassama, A.C.Rosenzweig. Periplasmic Protein To Be Published.
Page generated: Sun Dec 13 16:24:46 2020

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