Iron in PDB 6e1c: Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis
Protein crystallography data
The structure of Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis, PDB code: 6e1c
was solved by
L.M.K.Dassama,
A.C.Rosenzweig,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
42.88 /
2.62
|
Space group
|
P 21 21 21
|
Cell size a, b, c (Å), α, β, γ (°)
|
71.557,
85.757,
133.600,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
19.8 /
27.8
|
Other elements in 6e1c:
The structure of Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis also contains other interesting chemical elements:
Iron Binding Sites:
The binding sites of Iron atom in the Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis
(pdb code 6e1c). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the
Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis, PDB code: 6e1c:
Jump to Iron binding site number:
1;
2;
3;
4;
Iron binding site 1 out
of 4 in 6e1c
Go back to
Iron Binding Sites List in 6e1c
Iron binding site 1 out
of 4 in the Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe401
b:14.9
occ:1.00
|
FE
|
A:HEC401
|
0.0
|
14.9
|
1.0
|
NA
|
A:HEC401
|
2.1
|
13.6
|
1.0
|
NB
|
A:HEC401
|
2.1
|
14.5
|
1.0
|
ND
|
A:HEC401
|
2.1
|
12.9
|
1.0
|
NC
|
A:HEC401
|
2.1
|
14.1
|
1.0
|
NE2
|
A:HIS227
|
2.2
|
12.7
|
1.0
|
OH
|
A:TYR312
|
2.4
|
26.8
|
1.0
|
C4A
|
A:HEC401
|
3.1
|
13.8
|
1.0
|
C1D
|
A:HEC401
|
3.1
|
12.6
|
1.0
|
CD2
|
A:HIS227
|
3.1
|
13.5
|
1.0
|
C1A
|
A:HEC401
|
3.1
|
13.0
|
1.0
|
C4B
|
A:HEC401
|
3.1
|
14.6
|
1.0
|
C4C
|
A:HEC401
|
3.1
|
14.1
|
1.0
|
C4D
|
A:HEC401
|
3.1
|
12.3
|
1.0
|
C1B
|
A:HEC401
|
3.1
|
14.6
|
1.0
|
C1C
|
A:HEC401
|
3.1
|
14.7
|
1.0
|
CZ
|
A:TYR312
|
3.2
|
26.9
|
1.0
|
CE1
|
A:HIS227
|
3.2
|
13.1
|
1.0
|
CHD
|
A:HEC401
|
3.4
|
12.9
|
1.0
|
CHB
|
A:HEC401
|
3.4
|
14.3
|
1.0
|
CHA
|
A:HEC401
|
3.4
|
12.7
|
1.0
|
CHC
|
A:HEC401
|
3.5
|
14.6
|
1.0
|
CE2
|
A:TYR312
|
3.8
|
26.1
|
1.0
|
CE1
|
A:TYR312
|
4.0
|
27.2
|
1.0
|
CG
|
A:HIS227
|
4.3
|
13.8
|
1.0
|
ND1
|
A:HIS227
|
4.3
|
13.5
|
1.0
|
C3B
|
A:HEC401
|
4.4
|
15.3
|
1.0
|
C3A
|
A:HEC401
|
4.4
|
13.0
|
1.0
|
C3C
|
A:HEC401
|
4.4
|
15.1
|
1.0
|
C3D
|
A:HEC401
|
4.4
|
11.8
|
1.0
|
C2D
|
A:HEC401
|
4.4
|
12.3
|
1.0
|
C2A
|
A:HEC401
|
4.4
|
12.9
|
1.0
|
C2B
|
A:HEC401
|
4.4
|
15.2
|
1.0
|
C2C
|
A:HEC401
|
4.4
|
15.1
|
1.0
|
CD2
|
A:TYR312
|
5.0
|
26.4
|
1.0
|
|
Iron binding site 2 out
of 4 in 6e1c
Go back to
Iron Binding Sites List in 6e1c
Iron binding site 2 out
of 4 in the Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe402
b:10.1
occ:1.00
|
FE
|
A:HEC402
|
0.0
|
10.1
|
1.0
|
NC
|
A:HEC402
|
2.1
|
9.2
|
1.0
|
ND
|
A:HEC402
|
2.1
|
9.2
|
1.0
|
NB
|
A:HEC402
|
2.1
|
9.3
|
1.0
|
NA
|
A:HEC402
|
2.1
|
9.8
|
1.0
|
NE2
|
A:HIS74
|
2.3
|
6.4
|
1.0
|
C4B
|
A:HEC402
|
3.0
|
9.1
|
1.0
|
C1C
|
A:HEC402
|
3.0
|
9.1
|
1.0
|
C4D
|
A:HEC402
|
3.0
|
9.7
|
1.0
|
C4C
|
A:HEC402
|
3.1
|
9.3
|
1.0
|
C1A
|
A:HEC402
|
3.1
|
10.2
|
1.0
|
C1D
|
A:HEC402
|
3.1
|
9.5
|
1.0
|
C4A
|
A:HEC402
|
3.1
|
10.0
|
1.0
|
C1B
|
A:HEC402
|
3.1
|
9.3
|
1.0
|
CD2
|
A:HIS74
|
3.3
|
6.6
|
1.0
|
CE1
|
A:HIS74
|
3.3
|
6.5
|
1.0
|
CHC
|
A:HEC402
|
3.3
|
9.1
|
1.0
|
CHA
|
A:HEC402
|
3.4
|
9.6
|
1.0
|
CHB
|
A:HEC402
|
3.4
|
9.6
|
1.0
|
CHD
|
A:HEC402
|
3.4
|
9.4
|
1.0
|
C3B
|
A:HEC402
|
4.3
|
9.2
|
1.0
|
CG
|
A:PRO128
|
4.3
|
11.9
|
1.0
|
C3C
|
A:HEC402
|
4.3
|
9.5
|
1.0
|
C2C
|
A:HEC402
|
4.4
|
9.4
|
1.0
|
C3D
|
A:HEC402
|
4.4
|
9.6
|
1.0
|
C2D
|
A:HEC402
|
4.4
|
9.5
|
1.0
|
C2B
|
A:HEC402
|
4.4
|
9.2
|
1.0
|
ND1
|
A:HIS74
|
4.4
|
6.8
|
1.0
|
C2A
|
A:HEC402
|
4.4
|
11.4
|
1.0
|
C3A
|
A:HEC402
|
4.4
|
10.8
|
1.0
|
CG
|
A:HIS74
|
4.4
|
6.8
|
1.0
|
OE2
|
A:GLU136
|
4.6
|
24.4
|
1.0
|
CB
|
A:PRO128
|
4.7
|
11.8
|
1.0
|
NE2
|
A:GLN124
|
4.8
|
14.1
|
1.0
|
|
Iron binding site 3 out
of 4 in 6e1c
Go back to
Iron Binding Sites List in 6e1c
Iron binding site 3 out
of 4 in the Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe401
b:17.7
occ:1.00
|
FE
|
B:HEC401
|
0.0
|
17.7
|
1.0
|
NB
|
B:HEC401
|
2.1
|
15.9
|
1.0
|
NC
|
B:HEC401
|
2.1
|
15.8
|
1.0
|
NA
|
B:HEC401
|
2.1
|
17.1
|
1.0
|
ND
|
B:HEC401
|
2.1
|
16.6
|
1.0
|
NE2
|
B:HIS74
|
2.4
|
7.9
|
1.0
|
C4B
|
B:HEC401
|
3.0
|
15.2
|
1.0
|
C1B
|
B:HEC401
|
3.1
|
15.3
|
1.0
|
C4D
|
B:HEC401
|
3.1
|
17.3
|
1.0
|
C4C
|
B:HEC401
|
3.1
|
15.7
|
1.0
|
C1D
|
B:HEC401
|
3.1
|
16.6
|
1.0
|
C1C
|
B:HEC401
|
3.1
|
15.4
|
1.0
|
C1A
|
B:HEC401
|
3.1
|
17.9
|
1.0
|
C4A
|
B:HEC401
|
3.1
|
16.6
|
1.0
|
CHC
|
B:HEC401
|
3.4
|
14.7
|
1.0
|
CE1
|
B:HIS74
|
3.4
|
8.1
|
1.0
|
CD2
|
B:HIS74
|
3.4
|
8.3
|
1.0
|
CHA
|
B:HEC401
|
3.4
|
17.9
|
1.0
|
CHD
|
B:HEC401
|
3.4
|
16.2
|
1.0
|
CHB
|
B:HEC401
|
3.4
|
15.2
|
1.0
|
C3B
|
B:HEC401
|
4.3
|
15.4
|
1.0
|
C3C
|
B:HEC401
|
4.4
|
16.0
|
1.0
|
C2B
|
B:HEC401
|
4.4
|
15.6
|
1.0
|
C2D
|
B:HEC401
|
4.4
|
17.5
|
1.0
|
C3D
|
B:HEC401
|
4.4
|
18.3
|
1.0
|
C2A
|
B:HEC401
|
4.4
|
18.9
|
1.0
|
C3A
|
B:HEC401
|
4.4
|
18.0
|
1.0
|
C2C
|
B:HEC401
|
4.4
|
15.6
|
1.0
|
ND1
|
B:HIS74
|
4.5
|
8.2
|
1.0
|
CG
|
B:HIS74
|
4.5
|
8.5
|
1.0
|
CG
|
B:PRO128
|
4.6
|
29.0
|
1.0
|
NE2
|
B:GLN124
|
4.7
|
29.5
|
1.0
|
|
Iron binding site 4 out
of 4 in 6e1c
Go back to
Iron Binding Sites List in 6e1c
Iron binding site 4 out
of 4 in the Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Crystal Structure of A Maug-Like Protein Associated with Microbial Copper Homeostasis within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe402
b:19.9
occ:1.00
|
FE
|
B:HEC402
|
0.0
|
19.9
|
1.0
|
NB
|
B:HEC402
|
2.1
|
18.7
|
1.0
|
NA
|
B:HEC402
|
2.1
|
17.8
|
1.0
|
ND
|
B:HEC402
|
2.1
|
18.3
|
1.0
|
NC
|
B:HEC402
|
2.1
|
19.9
|
1.0
|
NE2
|
B:HIS227
|
2.2
|
26.6
|
1.0
|
OH
|
B:TYR312
|
2.3
|
25.9
|
1.0
|
C4B
|
B:HEC402
|
3.1
|
18.7
|
1.0
|
C1B
|
B:HEC402
|
3.1
|
18.8
|
1.0
|
C4A
|
B:HEC402
|
3.1
|
17.1
|
1.0
|
C1A
|
B:HEC402
|
3.1
|
17.8
|
1.0
|
C4D
|
B:HEC402
|
3.1
|
18.2
|
1.0
|
C4C
|
B:HEC402
|
3.1
|
19.6
|
1.0
|
C1C
|
B:HEC402
|
3.1
|
20.4
|
1.0
|
C1D
|
B:HEC402
|
3.1
|
19.3
|
1.0
|
CE1
|
B:HIS227
|
3.2
|
26.6
|
1.0
|
CD2
|
B:HIS227
|
3.2
|
28.1
|
1.0
|
CZ
|
B:TYR312
|
3.2
|
24.4
|
1.0
|
CHB
|
B:HEC402
|
3.4
|
18.4
|
1.0
|
CHA
|
B:HEC402
|
3.4
|
17.7
|
1.0
|
CHC
|
B:HEC402
|
3.5
|
19.7
|
1.0
|
CHD
|
B:HEC402
|
3.5
|
19.3
|
1.0
|
CE2
|
B:TYR312
|
3.8
|
23.8
|
1.0
|
CE1
|
B:TYR312
|
4.0
|
24.5
|
1.0
|
ND1
|
B:HIS227
|
4.3
|
27.7
|
1.0
|
CG
|
B:HIS227
|
4.3
|
29.4
|
1.0
|
C3B
|
B:HEC402
|
4.4
|
18.4
|
1.0
|
C3C
|
B:HEC402
|
4.4
|
20.8
|
1.0
|
C3A
|
B:HEC402
|
4.4
|
16.9
|
1.0
|
C2A
|
B:HEC402
|
4.4
|
16.9
|
1.0
|
C3D
|
B:HEC402
|
4.4
|
19.6
|
1.0
|
C2B
|
B:HEC402
|
4.4
|
18.1
|
1.0
|
C2C
|
B:HEC402
|
4.4
|
21.0
|
1.0
|
C2D
|
B:HEC402
|
4.4
|
19.8
|
1.0
|
CD2
|
B:TYR312
|
5.0
|
22.9
|
1.0
|
|
Reference:
L.M.K.Dassama,
A.C.Rosenzweig.
Periplasmic Protein To Be Published.
Page generated: Tue Aug 6 17:12:45 2024
|