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Iron in PDB 6r4q: Crystal Structure of the Periplasmic Nickel-Binding Protein Nika From Escherichia Coli in Complex with Ru(Bpza)Co H2O Cl

Protein crystallography data

The structure of Crystal Structure of the Periplasmic Nickel-Binding Protein Nika From Escherichia Coli in Complex with Ru(Bpza)Co H2O Cl, PDB code: 6r4q was solved by C.Cavazza, S.Menage, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.52 / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 86.629, 94.101, 124.418, 90.00, 90.00, 90.00
R / Rfree (%) 17.8 / 23.2

Other elements in 6r4q:

The structure of Crystal Structure of the Periplasmic Nickel-Binding Protein Nika From Escherichia Coli in Complex with Ru(Bpza)Co H2O Cl also contains other interesting chemical elements:

Ruthenium (Ru) 1 atom
Chlorine (Cl) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the Periplasmic Nickel-Binding Protein Nika From Escherichia Coli in Complex with Ru(Bpza)Co H2O Cl (pdb code 6r4q). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of the Periplasmic Nickel-Binding Protein Nika From Escherichia Coli in Complex with Ru(Bpza)Co H2O Cl, PDB code: 6r4q:

Iron binding site 1 out of 1 in 6r4q

Go back to Iron Binding Sites List in 6r4q
Iron binding site 1 out of 1 in the Crystal Structure of the Periplasmic Nickel-Binding Protein Nika From Escherichia Coli in Complex with Ru(Bpza)Co H2O Cl


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the Periplasmic Nickel-Binding Protein Nika From Escherichia Coli in Complex with Ru(Bpza)Co H2O Cl within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe601

b:19.0
occ:1.00
O A:HOH701 1.7 29.4 1.0
O14 A:EDT602 1.9 24.1 1.0
O15 A:EDT602 2.1 22.4 1.0
O17 A:EDT602 2.2 29.2 1.0
O19 A:EDT602 2.2 25.0 1.0
N8 A:EDT602 2.3 24.6 1.0
N3 A:EDT602 2.4 27.1 1.0
C12 A:EDT602 2.8 24.7 1.0
C10 A:EDT602 2.9 21.8 1.0
C1 A:EDT602 3.0 32.1 1.0
C5 A:EDT602 3.0 30.5 1.0
C9 A:EDT602 3.1 24.1 1.0
C4 A:EDT602 3.1 28.5 1.0
C11 A:EDT602 3.1 23.5 1.0
C7 A:EDT602 3.2 25.8 1.0
C2 A:EDT602 3.2 29.0 1.0
C6 A:EDT602 3.3 25.2 1.0
O13 A:EDT602 4.0 25.9 1.0
NH2 A:ARG137 4.0 17.6 1.0
O16 A:EDT602 4.1 20.6 1.0
O18 A:EDT602 4.2 34.8 1.0
O20 A:EDT602 4.2 27.9 1.0
CE A:MET27 4.7 27.8 1.0

Reference:

C.Cavazza, S.Menage. Crystal Structure of the Periplasmic Nickel-Binding Protein Nika From Escherichia Coli in Complex with Ru(Bpza)Co H2O Cl To Be Published.
Page generated: Wed Aug 7 08:39:55 2024

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