Iron in PDB 7czl: Structural Insights Into A Dimeric PSB27-Photosystem II Complex From A Cyanobacterium Thermosynechococcus Vulcanus

Enzymatic activity of Structural Insights Into A Dimeric PSB27-Photosystem II Complex From A Cyanobacterium Thermosynechococcus Vulcanus

All present enzymatic activity of Structural Insights Into A Dimeric PSB27-Photosystem II Complex From A Cyanobacterium Thermosynechococcus Vulcanus:
1.10.3.9;

Other elements in 7czl:

The structure of Structural Insights Into A Dimeric PSB27-Photosystem II Complex From A Cyanobacterium Thermosynechococcus Vulcanus also contains other interesting chemical elements:

Magnesium (Mg) 70 atoms
Calcium (Ca) 2 atoms
Chlorine (Cl) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Structural Insights Into A Dimeric PSB27-Photosystem II Complex From A Cyanobacterium Thermosynechococcus Vulcanus (pdb code 7czl). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Structural Insights Into A Dimeric PSB27-Photosystem II Complex From A Cyanobacterium Thermosynechococcus Vulcanus, PDB code: 7czl:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in 7czl

Go back to Iron Binding Sites List in 7czl
Iron binding site 1 out of 4 in the Structural Insights Into A Dimeric PSB27-Photosystem II Complex From A Cyanobacterium Thermosynechococcus Vulcanus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structural Insights Into A Dimeric PSB27-Photosystem II Complex From A Cyanobacterium Thermosynechococcus Vulcanus within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe401

b:60.3
occ:1.00
 O2 A:BCT411 2.5 72.6 1.0
NE2 D:HIS214 2.5 61.6 1.0
NE2 A:HIS215 2.6 63.3 1.0
CD2 D:HIS268 2.7 60.4 1.0
CD2 D:HIS214 2.7 61.7 1.0
CD2 A:HIS215 2.7 64.2 1.0
NE2 D:HIS268 2.9 60.0 1.0
SD D:MET271 2.9 58.3 1.0
CE1 D:HIS214 3.1 62.3 1.0
CG D:HIS214 3.3 62.5 1.0
ND1 D:HIS214 3.6 62.1 1.0
C A:BCT411 3.6 74.0 1.0
CG D:HIS268 3.7 60.8 1.0
CE1 A:HIS215 3.7 62.2 1.0
CG A:HIS215 3.8 63.0 1.0
CE1 D:HIS268 3.9 60.4 1.0
CE D:MET271 3.9 59.4 1.0
CD2 D:LEU267 4.1 55.1 1.0
O A:HIS215 4.1 64.3 1.0
O3 A:BCT411 4.2 73.6 1.0
ND1 A:HIS215 4.3 62.9 1.0
ND1 D:HIS268 4.3 60.8 1.0
CB D:HIS214 4.4 62.5 1.0
CG D:MET271 4.5 60.3 1.0
C A:HIS215 4.6 63.3 1.0
CB D:HIS268 4.6 60.7 1.0
O1 A:BCT411 4.6 73.8 1.0
CA D:HIS268 4.7 61.8 1.0
CB A:HIS215 4.8 61.9 1.0
N A:GLY216 4.9 63.7 1.0
NE2 A:HIS272 4.9 53.8 1.0
CA A:GLY216 4.9 64.2 1.0

Iron binding site 2 out of 4 in 7czl

Go back to Iron Binding Sites List in 7czl
Iron binding site 2 out of 4 in the Structural Insights Into A Dimeric PSB27-Photosystem II Complex From A Cyanobacterium Thermosynechococcus Vulcanus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structural Insights Into A Dimeric PSB27-Photosystem II Complex From A Cyanobacterium Thermosynechococcus Vulcanus within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Fe101

b:82.8
occ:1.00
 FE F:HEM101 0.0 82.8 1.0
NC F:HEM101 2.0 83.6 1.0
NA F:HEM101 2.0 84.9 1.0
NB F:HEM101 2.0 83.8 1.0
ND F:HEM101 2.0 83.5 1.0
NE2 F:HIS24 2.5 77.2 1.0
CE1 E:HIS23 2.8 83.3 1.0
CD2 F:HIS24 3.0 76.9 1.0
C4A F:HEM101 3.0 86.3 1.0
C4C F:HEM101 3.0 83.0 1.0
C1D F:HEM101 3.0 84.4 1.0
C1C F:HEM101 3.0 83.4 1.0
C1B F:HEM101 3.0 84.3 1.0
C1A F:HEM101 3.0 85.8 1.0
C4D F:HEM101 3.1 84.7 1.0
C4B F:HEM101 3.1 83.6 1.0
CHD F:HEM101 3.3 83.4 1.0
CHB F:HEM101 3.4 86.2 1.0
CHC F:HEM101 3.4 83.7 1.0
CHA F:HEM101 3.4 85.2 1.0
ND1 E:HIS23 3.6 83.9 1.0
CE1 F:HIS24 3.7 77.8 1.0
NE2 E:HIS23 3.8 83.0 1.0
NE1 F:TRP20 4.2 63.1 1.0
C2D F:HEM101 4.2 85.5 1.0
C3A F:HEM101 4.2 87.5 1.0
C2C F:HEM101 4.2 83.0 1.0
C3D F:HEM101 4.2 85.5 1.0
C3C F:HEM101 4.2 82.3 1.0
C2A F:HEM101 4.2 87.7 1.0
C2B F:HEM101 4.3 84.0 1.0
CG F:HIS24 4.3 76.0 1.0
C3B F:HEM101 4.3 83.6 1.0
ND1 F:HIS24 4.6 76.7 1.0
CD1 F:TRP20 4.7 64.0 1.0
CG E:HIS23 4.9 82.2 1.0
CD2 E:HIS23 5.0 82.1 1.0

Iron binding site 3 out of 4 in 7czl

Go back to Iron Binding Sites List in 7czl
Iron binding site 3 out of 4 in the Structural Insights Into A Dimeric PSB27-Photosystem II Complex From A Cyanobacterium Thermosynechococcus Vulcanus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Structural Insights Into A Dimeric PSB27-Photosystem II Complex From A Cyanobacterium Thermosynechococcus Vulcanus within 5.0Å range:
probe atom residue distance (Å) B Occ
d:Fe5401

b:75.1
occ:1.00
 O2 a:BCT5412 2.4 75.8 1.0
NE2 a:HIS5215 2.6 69.1 1.0
CD2 a:HIS5215 2.7 68.8 1.0
CD2 d:HIS5268 2.7 64.0 1.0
NE2 d:HIS5214 2.8 65.8 1.0
NE2 d:HIS5268 2.9 63.4 1.0
CD2 d:HIS5214 3.0 65.4 1.0
SD d:MET5271 3.0 63.0 1.0
CE1 d:HIS5214 3.5 65.7 1.0
C a:BCT5412 3.6 77.8 1.0
CG d:HIS5268 3.6 64.5 1.0
CE1 a:HIS5215 3.7 68.5 1.0
CG d:HIS5214 3.7 66.1 1.0
CG a:HIS5215 3.8 69.0 1.0
CE1 d:HIS5268 3.9 62.9 1.0
CE d:MET5271 4.0 62.2 1.0
ND1 d:HIS5214 4.0 65.6 1.0
O a:HIS5215 4.1 68.6 1.0
ND1 d:HIS5268 4.2 63.7 1.0
ND1 a:HIS5215 4.3 68.8 1.0
O3 a:BCT5412 4.3 76.9 1.0
CD2 d:LEU5267 4.4 61.7 1.0
CB d:HIS5268 4.5 64.0 1.0
O1 a:BCT5412 4.5 75.6 1.0
C a:HIS5215 4.6 69.6 1.0
CG d:MET5271 4.6 61.3 1.0
CA d:HIS5268 4.7 64.3 1.0
CB d:HIS5214 4.8 65.2 1.0
CB a:HIS5215 4.8 68.4 1.0
N a:GLY5216 4.9 69.5 1.0
NE2 a:HIS5272 4.9 66.8 1.0
CA a:GLY5216 4.9 69.8 1.0

Iron binding site 4 out of 4 in 7czl

Go back to Iron Binding Sites List in 7czl
Iron binding site 4 out of 4 in the Structural Insights Into A Dimeric PSB27-Photosystem II Complex From A Cyanobacterium Thermosynechococcus Vulcanus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Structural Insights Into A Dimeric PSB27-Photosystem II Complex From A Cyanobacterium Thermosynechococcus Vulcanus within 5.0Å range:
probe atom residue distance (Å) B Occ
f:Fe5101

b:84.8
occ:1.00
 FE f:HEM5101 0.0 84.8 1.0
NC f:HEM5101 2.0 83.9 1.0
NA f:HEM5101 2.0 87.0 1.0
NB f:HEM5101 2.0 84.9 1.0
ND f:HEM5101 2.0 84.3 1.0
CE1 e:HIS5023 2.7 82.3 1.0
C4A f:HEM5101 3.0 87.4 1.0
C1D f:HEM5101 3.0 84.2 1.0
C4C f:HEM5101 3.0 83.5 1.0
C1C f:HEM5101 3.0 83.5 1.0
C1B f:HEM5101 3.0 84.1 1.0
C1A f:HEM5101 3.0 88.8 1.0
C4D f:HEM5101 3.0 86.1 1.0
C4B f:HEM5101 3.1 84.5 1.0
CHD f:HEM5101 3.3 84.1 1.0
CHB f:HEM5101 3.4 85.2 1.0
CHC f:HEM5101 3.4 84.3 1.0
CHA f:HEM5101 3.4 87.8 1.0
ND1 e:HIS5023 3.6 82.6 1.0
NE2 e:HIS5023 3.6 82.8 1.0
NE1 f:TRP5020 4.2 81.3 1.0
C2D f:HEM5101 4.2 84.8 1.0
C3A f:HEM5101 4.2 89.1 1.0
C2C f:HEM5101 4.2 83.0 1.0
C3D f:HEM5101 4.2 86.2 1.0
C3C f:HEM5101 4.2 82.8 1.0
C2A f:HEM5101 4.2 90.8 1.0
C2B f:HEM5101 4.3 84.0 1.0
C3B f:HEM5101 4.3 84.3 1.0
CD1 f:TRP5020 4.7 81.3 1.0
CG e:HIS5023 4.8 82.3 1.0
CD2 e:HIS5023 4.8 82.1 1.0

Reference:

X.Pi, G.Huang, Y.Xiao. Structural Insights Into A Dimeric PSB27-Photosystem II Complex From A Cyanobacterium Thermosynechococcus Vulcanus To Be Published.
Page generated: Sun Jan 24 17:11:24 2021

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