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Iron in PDB 8bf6: X-Ray Structure of the Ceue Homologue From Parageobacillus Thermoglucosidasius - Azotochelin Complex

Protein crystallography data

The structure of X-Ray Structure of the Ceue Homologue From Parageobacillus Thermoglucosidasius - Azotochelin Complex, PDB code: 8bf6 was solved by K.S.Wilson, A.-K.Duhme-Klair, E.V.Blagova, A.Miller, R.Booth, E.J.Dodson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 70.84 / 1.97
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 36.295, 116.711, 141.471, 90, 90, 90
R / Rfree (%) 20.5 / 25.5

Other elements in 8bf6:

The structure of X-Ray Structure of the Ceue Homologue From Parageobacillus Thermoglucosidasius - Azotochelin Complex also contains other interesting chemical elements:

Nickel (Ni) 5 atoms

Iron Binding Sites:

The binding sites of Iron atom in the X-Ray Structure of the Ceue Homologue From Parageobacillus Thermoglucosidasius - Azotochelin Complex (pdb code 8bf6). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the X-Ray Structure of the Ceue Homologue From Parageobacillus Thermoglucosidasius - Azotochelin Complex, PDB code: 8bf6:

Iron binding site 1 out of 1 in 8bf6

Go back to Iron Binding Sites List in 8bf6
Iron binding site 1 out of 1 in the X-Ray Structure of the Ceue Homologue From Parageobacillus Thermoglucosidasius - Azotochelin Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of X-Ray Structure of the Ceue Homologue From Parageobacillus Thermoglucosidasius - Azotochelin Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe301

b:48.2
occ:1.00
HH A:TYR276 1.4 47.7 1.0
OAF A:95B302 2.0 46.2 1.0
OAE A:95B302 2.0 44.0 1.0
OAG A:95B302 2.0 48.0 1.0
OAH A:95B302 2.0 48.1 1.0
OH A:TYR276 2.0 48.6 1.0
NE2 A:HIS215 2.2 50.7 1.0
H2 A:95B302 2.3 46.0 1.0
H22 A:95B302 2.6 30.0 0.0
H21 A:95B302 2.6 30.0 0.0
H1 A:95B302 2.6 30.0 0.0
CAX A:95B302 2.8 46.4 1.0
CAZ A:95B302 2.8 46.5 1.0
CAY A:95B302 2.9 46.8 1.0
CBA A:95B302 2.9 47.5 1.0
CZ A:TYR276 3.1 44.8 1.0
CE1 A:HIS215 3.2 55.9 1.0
CD2 A:HIS215 3.3 54.2 1.0
HE A:ARG105 3.3 44.6 1.0
HE1 A:HIS215 3.3 54.2 1.0
HH11 A:ARG105 3.4 30.0 0.0
HE A:ARG237 3.4 51.6 1.0
HH22 A:ARG237 3.4 51.4 1.0
HD2 A:HIS215 3.4 52.9 1.0
HH12 A:ARG193 3.4 30.0 0.0
HE2 A:TYR276 3.7 43.8 1.0
CE2 A:TYR276 3.8 44.4 1.0
H6 A:95B302 3.8 55.3 1.0
H17 A:95B302 3.8 52.3 1.0
HE1 A:MET85 3.8 65.7 1.0
HE3 A:MET85 3.9 66.0 1.0
HH21 A:ARG193 3.9 43.6 1.0
CE1 A:TYR276 4.1 47.9 1.0
NE A:ARG105 4.1 43.1 1.0
HE1 A:TYR276 4.1 46.8 1.0
CAK A:95B302 4.2 45.5 1.0
NH2 A:ARG237 4.2 50.0 1.0
CE A:MET85 4.2 68.1 1.0
NH1 A:ARG105 4.2 43.5 1.0
NE A:ARG237 4.2 51.4 1.0
CBB A:95B302 4.2 50.3 1.0
HE2 A:MET85 4.2 67.1 1.0
CAL A:95B302 4.2 47.0 1.0
HG23 A:THR214 4.3 51.9 1.0
CBC A:95B302 4.3 51.7 1.0
NH1 A:ARG193 4.3 46.0 1.0
ND1 A:HIS215 4.3 54.5 1.0
H11 A:95B302 4.3 55.0 1.0
CG A:HIS215 4.4 55.0 1.0
H20 A:95B302 4.6 46.0 1.0
CZ A:ARG105 4.6 45.4 1.0
NAS A:95B302 4.6 53.7 1.0
H3 A:95B302 4.6 46.0 1.0
N A:95B302 4.6 54.8 1.0
NH2 A:ARG193 4.6 42.7 1.0
CZ A:ARG237 4.7 56.6 1.0
HH12 A:ARG105 4.8 30.0 0.0
HG2 A:ARG105 4.8 45.5 1.0
HH21 A:ARG237 4.8 52.2 1.0
HG21 A:THR214 4.9 51.8 1.0
HH11 A:ARG193 4.9 30.0 0.0
HG21 A:VAL241 4.9 49.9 1.0
CG2 A:THR214 4.9 52.4 1.0
HG22 A:THR214 4.9 51.1 1.0
CAV A:95B302 4.9 48.7 1.0
CZ A:ARG193 5.0 47.1 1.0

Reference:

E.V.Blagova, A.Miller, M.Bennett, R.Booth, E.J.Dodson, A.-K.Duhme-Klair, K.S.Wilson. Thermostable Homologues of the Periplasmic Siderophore-Binding Protein Ceue From and Acta Crystallogr.,Sect.D 2023.
ISSN: ESSN 1399-0047
Page generated: Thu Aug 7 13:49:27 2025

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