Iron in PDB 8c0z: Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum
Other elements in 8c0z:
The structure of Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum also contains other interesting chemical elements:
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
40;
Binding sites:
The binding sites of Iron atom in the Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum
(pdb code 8c0z). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 40 binding sites of Iron where determined in the
Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum, PDB code: 8c0z:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 40 in 8c0z
Go back to
Iron Binding Sites List in 8c0z
Iron binding site 1 out
of 40 in the Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe701
b:21.0
occ:1.00
|
FE1
|
A:SF4701
|
0.0
|
21.0
|
1.0
|
SG
|
A:CYS302
|
2.3
|
15.9
|
1.0
|
S4
|
A:SF4701
|
2.3
|
21.0
|
1.0
|
S2
|
A:SF4701
|
2.3
|
21.0
|
1.0
|
S3
|
A:SF4701
|
2.3
|
21.0
|
1.0
|
FE2
|
A:SF4701
|
2.7
|
21.0
|
1.0
|
FE3
|
A:SF4701
|
2.7
|
21.0
|
1.0
|
FE4
|
A:SF4701
|
2.7
|
21.0
|
1.0
|
CB
|
A:CYS302
|
3.7
|
15.9
|
1.0
|
S1
|
A:SF4701
|
3.9
|
21.0
|
1.0
|
N
|
A:CYS302
|
4.0
|
15.9
|
1.0
|
CA
|
A:CYS302
|
4.3
|
15.9
|
1.0
|
CD2
|
A:PHE511
|
4.6
|
22.1
|
1.0
|
C
|
A:CYS302
|
4.6
|
15.9
|
1.0
|
SG
|
A:CYS298
|
4.7
|
9.5
|
1.0
|
NH2
|
A:ARG181
|
4.8
|
20.4
|
1.0
|
SG
|
A:CYS509
|
4.8
|
17.1
|
1.0
|
SG
|
A:CYS295
|
4.8
|
9.5
|
1.0
|
N
|
A:GLY303
|
4.9
|
16.1
|
1.0
|
CE2
|
A:PHE511
|
4.9
|
22.1
|
1.0
|
|
Iron binding site 2 out
of 40 in 8c0z
Go back to
Iron Binding Sites List in 8c0z
Iron binding site 2 out
of 40 in the Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe701
b:21.0
occ:1.00
|
FE2
|
A:SF4701
|
0.0
|
21.0
|
1.0
|
SG
|
A:CYS298
|
2.3
|
9.5
|
1.0
|
S3
|
A:SF4701
|
2.3
|
21.0
|
1.0
|
S4
|
A:SF4701
|
2.3
|
21.0
|
1.0
|
S1
|
A:SF4701
|
2.3
|
21.0
|
1.0
|
FE4
|
A:SF4701
|
2.7
|
21.0
|
1.0
|
FE1
|
A:SF4701
|
2.7
|
21.0
|
1.0
|
FE3
|
A:SF4701
|
2.7
|
21.0
|
1.0
|
CB
|
A:CYS298
|
3.1
|
9.5
|
1.0
|
S2
|
A:SF4701
|
3.9
|
21.0
|
1.0
|
N
|
A:ALA301
|
4.4
|
12.1
|
1.0
|
CG2
|
A:THR72
|
4.4
|
12.2
|
1.0
|
CA
|
A:CYS298
|
4.5
|
9.5
|
1.0
|
CB
|
A:ILE300
|
4.6
|
11.9
|
1.0
|
SG
|
A:CYS295
|
4.6
|
9.5
|
1.0
|
SG
|
A:CYS509
|
4.7
|
17.1
|
1.0
|
SG
|
A:CYS302
|
4.7
|
15.9
|
1.0
|
CB
|
A:CYS295
|
4.7
|
9.5
|
1.0
|
N
|
A:CYS295
|
4.8
|
9.5
|
1.0
|
N
|
A:CYS302
|
4.9
|
15.9
|
1.0
|
CB
|
A:THR72
|
4.9
|
12.2
|
1.0
|
CA
|
A:ALA301
|
5.0
|
12.1
|
1.0
|
|
Iron binding site 3 out
of 40 in 8c0z
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Iron Binding Sites List in 8c0z
Iron binding site 3 out
of 40 in the Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe701
b:21.0
occ:1.00
|
FE3
|
A:SF4701
|
0.0
|
21.0
|
1.0
|
SG
|
A:CYS509
|
2.3
|
17.1
|
1.0
|
S4
|
A:SF4701
|
2.3
|
21.0
|
1.0
|
S1
|
A:SF4701
|
2.3
|
21.0
|
1.0
|
S2
|
A:SF4701
|
2.3
|
21.0
|
1.0
|
FE1
|
A:SF4701
|
2.7
|
21.0
|
1.0
|
FE2
|
A:SF4701
|
2.7
|
21.0
|
1.0
|
FE4
|
A:SF4701
|
2.7
|
21.0
|
1.0
|
CB
|
A:CYS509
|
3.4
|
17.1
|
1.0
|
S3
|
A:SF4701
|
3.9
|
21.0
|
1.0
|
NH1
|
A:ARG75
|
4.2
|
14.7
|
1.0
|
SG
|
A:CYS302
|
4.7
|
15.9
|
1.0
|
CA
|
A:CYS509
|
4.7
|
17.1
|
1.0
|
CD2
|
A:PHE511
|
4.8
|
22.1
|
1.0
|
SG
|
A:CYS298
|
4.8
|
9.5
|
1.0
|
SG
|
A:CYS295
|
4.9
|
9.5
|
1.0
|
N5
|
A:T7R702
|
4.9
|
22.1
|
1.0
|
|
Iron binding site 4 out
of 40 in 8c0z
Go back to
Iron Binding Sites List in 8c0z
Iron binding site 4 out
of 40 in the Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe701
b:21.0
occ:1.00
|
FE4
|
A:SF4701
|
0.0
|
21.0
|
1.0
|
SG
|
A:CYS295
|
2.3
|
9.5
|
1.0
|
S3
|
A:SF4701
|
2.3
|
21.0
|
1.0
|
S1
|
A:SF4701
|
2.3
|
21.0
|
1.0
|
S2
|
A:SF4701
|
2.3
|
21.0
|
1.0
|
FE2
|
A:SF4701
|
2.7
|
21.0
|
1.0
|
FE1
|
A:SF4701
|
2.7
|
21.0
|
1.0
|
FE3
|
A:SF4701
|
2.7
|
21.0
|
1.0
|
CB
|
A:CYS295
|
3.3
|
9.5
|
1.0
|
S4
|
A:SF4701
|
3.9
|
21.0
|
1.0
|
NH2
|
A:ARG181
|
4.0
|
20.4
|
1.0
|
N
|
A:CYS295
|
4.1
|
9.5
|
1.0
|
NH1
|
A:ARG75
|
4.2
|
14.7
|
1.0
|
CA
|
A:CYS295
|
4.3
|
9.5
|
1.0
|
CZ
|
A:ARG181
|
4.5
|
20.4
|
1.0
|
SG
|
A:CYS298
|
4.7
|
9.5
|
1.0
|
NE
|
A:ARG181
|
4.7
|
20.4
|
1.0
|
CB
|
A:CYS298
|
4.8
|
9.5
|
1.0
|
SG
|
A:CYS302
|
4.8
|
15.9
|
1.0
|
SG
|
A:CYS509
|
4.9
|
17.1
|
1.0
|
|
Iron binding site 5 out
of 40 in 8c0z
Go back to
Iron Binding Sites List in 8c0z
Iron binding site 5 out
of 40 in the Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe704
b:23.8
occ:1.00
|
FE1
|
B:SF4704
|
0.0
|
23.8
|
1.0
|
SG
|
B:CYS302
|
2.3
|
14.0
|
1.0
|
S4
|
B:SF4704
|
2.3
|
23.8
|
1.0
|
S3
|
B:SF4704
|
2.3
|
23.8
|
1.0
|
S2
|
B:SF4704
|
2.3
|
23.8
|
1.0
|
FE2
|
B:SF4704
|
2.7
|
23.8
|
1.0
|
FE3
|
B:SF4704
|
2.7
|
23.8
|
1.0
|
FE4
|
B:SF4704
|
2.7
|
23.8
|
1.0
|
CB
|
B:CYS302
|
3.5
|
14.0
|
1.0
|
S1
|
B:SF4704
|
3.9
|
23.8
|
1.0
|
N
|
B:CYS302
|
4.1
|
14.0
|
1.0
|
CA
|
B:CYS302
|
4.3
|
14.0
|
1.0
|
CD2
|
B:PHE511
|
4.4
|
21.6
|
1.0
|
C
|
B:CYS302
|
4.6
|
14.0
|
1.0
|
CE2
|
B:PHE511
|
4.7
|
21.6
|
1.0
|
SG
|
B:CYS295
|
4.7
|
10.8
|
1.0
|
SG
|
B:CYS509
|
4.8
|
17.2
|
1.0
|
SG
|
B:CYS298
|
4.8
|
9.9
|
1.0
|
N
|
B:GLY303
|
4.9
|
14.7
|
1.0
|
|
Iron binding site 6 out
of 40 in 8c0z
Go back to
Iron Binding Sites List in 8c0z
Iron binding site 6 out
of 40 in the Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe704
b:23.8
occ:1.00
|
FE2
|
B:SF4704
|
0.0
|
23.8
|
1.0
|
SG
|
B:CYS298
|
2.3
|
9.9
|
1.0
|
S3
|
B:SF4704
|
2.3
|
23.8
|
1.0
|
S1
|
B:SF4704
|
2.3
|
23.8
|
1.0
|
S4
|
B:SF4704
|
2.3
|
23.8
|
1.0
|
FE4
|
B:SF4704
|
2.7
|
23.8
|
1.0
|
FE1
|
B:SF4704
|
2.7
|
23.8
|
1.0
|
FE3
|
B:SF4704
|
2.7
|
23.8
|
1.0
|
CB
|
B:CYS298
|
3.2
|
9.9
|
1.0
|
S2
|
B:SF4704
|
3.9
|
23.8
|
1.0
|
CG2
|
B:THR72
|
4.4
|
15.6
|
1.0
|
N
|
B:ALA301
|
4.5
|
11.3
|
1.0
|
CA
|
B:CYS298
|
4.6
|
9.9
|
1.0
|
CB
|
B:ILE300
|
4.6
|
11.1
|
1.0
|
SG
|
B:CYS295
|
4.6
|
10.8
|
1.0
|
SG
|
B:CYS509
|
4.7
|
17.2
|
1.0
|
SG
|
B:CYS302
|
4.7
|
14.0
|
1.0
|
N
|
B:CYS302
|
4.8
|
14.0
|
1.0
|
N
|
B:CYS295
|
4.9
|
10.8
|
1.0
|
CB
|
B:CYS295
|
4.9
|
10.8
|
1.0
|
CD1
|
B:ILE300
|
5.0
|
11.1
|
1.0
|
|
Iron binding site 7 out
of 40 in 8c0z
Go back to
Iron Binding Sites List in 8c0z
Iron binding site 7 out
of 40 in the Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe704
b:23.8
occ:1.00
|
FE3
|
B:SF4704
|
0.0
|
23.8
|
1.0
|
SG
|
B:CYS509
|
2.3
|
17.2
|
1.0
|
S1
|
B:SF4704
|
2.3
|
23.8
|
1.0
|
S4
|
B:SF4704
|
2.3
|
23.8
|
1.0
|
S2
|
B:SF4704
|
2.3
|
23.8
|
1.0
|
FE2
|
B:SF4704
|
2.7
|
23.8
|
1.0
|
FE1
|
B:SF4704
|
2.7
|
23.8
|
1.0
|
FE4
|
B:SF4704
|
2.7
|
23.8
|
1.0
|
CB
|
B:CYS509
|
3.4
|
17.2
|
1.0
|
S3
|
B:SF4704
|
3.9
|
23.8
|
1.0
|
NH2
|
B:ARG75
|
3.9
|
18.3
|
1.0
|
CD2
|
B:PHE511
|
4.6
|
21.6
|
1.0
|
N5
|
B:T7R701
|
4.7
|
25.9
|
1.0
|
CZ
|
B:ARG75
|
4.7
|
18.3
|
1.0
|
CA
|
B:CYS509
|
4.8
|
17.2
|
1.0
|
SG
|
B:CYS298
|
4.8
|
9.9
|
1.0
|
SG
|
B:CYS302
|
4.8
|
14.0
|
1.0
|
C27
|
B:T7R701
|
4.9
|
25.9
|
1.0
|
SG
|
B:CYS295
|
4.9
|
10.8
|
1.0
|
CB
|
B:PHE511
|
4.9
|
21.6
|
1.0
|
CG
|
B:PHE511
|
5.0
|
21.6
|
1.0
|
NE
|
B:ARG75
|
5.0
|
18.3
|
1.0
|
|
Iron binding site 8 out
of 40 in 8c0z
Go back to
Iron Binding Sites List in 8c0z
Iron binding site 8 out
of 40 in the Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe704
b:23.8
occ:1.00
|
FE4
|
B:SF4704
|
0.0
|
23.8
|
1.0
|
SG
|
B:CYS295
|
2.3
|
10.8
|
1.0
|
S3
|
B:SF4704
|
2.3
|
23.8
|
1.0
|
S1
|
B:SF4704
|
2.3
|
23.8
|
1.0
|
S2
|
B:SF4704
|
2.3
|
23.8
|
1.0
|
FE2
|
B:SF4704
|
2.7
|
23.8
|
1.0
|
FE1
|
B:SF4704
|
2.7
|
23.8
|
1.0
|
FE3
|
B:SF4704
|
2.7
|
23.8
|
1.0
|
CB
|
B:CYS295
|
3.3
|
10.8
|
1.0
|
NH2
|
B:ARG75
|
3.8
|
18.3
|
1.0
|
S4
|
B:SF4704
|
3.9
|
23.8
|
1.0
|
N
|
B:CYS295
|
4.1
|
10.8
|
1.0
|
CA
|
B:CYS295
|
4.4
|
10.8
|
1.0
|
SG
|
B:CYS298
|
4.7
|
9.9
|
1.0
|
SG
|
B:CYS302
|
4.8
|
14.0
|
1.0
|
CB
|
B:CYS298
|
4.8
|
9.9
|
1.0
|
SG
|
B:CYS509
|
4.8
|
17.2
|
1.0
|
CZ
|
B:ARG75
|
4.9
|
18.3
|
1.0
|
NH2
|
B:ARG181
|
5.0
|
23.3
|
1.0
|
|
Iron binding site 9 out
of 40 in 8c0z
Go back to
Iron Binding Sites List in 8c0z
Iron binding site 9 out
of 40 in the Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe301
b:12.7
occ:1.00
|
FE1
|
C:SF4301
|
0.0
|
12.7
|
1.0
|
SG
|
C:CYS22
|
2.3
|
5.5
|
1.0
|
S4
|
C:SF4301
|
2.3
|
12.7
|
1.0
|
S2
|
C:SF4301
|
2.3
|
12.7
|
1.0
|
S3
|
C:SF4301
|
2.3
|
12.7
|
1.0
|
FE4
|
C:SF4301
|
2.7
|
12.7
|
1.0
|
FE3
|
C:SF4301
|
2.7
|
12.7
|
1.0
|
FE2
|
C:SF4301
|
2.7
|
12.7
|
1.0
|
CB
|
C:CYS22
|
3.4
|
5.5
|
1.0
|
S1
|
C:SF4301
|
3.9
|
12.7
|
1.0
|
CA
|
C:CYS22
|
4.2
|
5.5
|
1.0
|
SG
|
C:CYS116
|
4.6
|
17.2
|
1.0
|
CG
|
C:ARG36
|
4.7
|
4.0
|
1.0
|
SG
|
C:CYS122
|
4.7
|
11.3
|
1.0
|
NE2
|
C:HIS26
|
4.8
|
6.5
|
1.0
|
CB
|
C:ARG36
|
4.8
|
4.0
|
1.0
|
SG
|
C:CYS113
|
4.8
|
7.2
|
1.0
|
CD2
|
C:HIS26
|
4.9
|
6.5
|
1.0
|
O
|
C:CYS22
|
4.9
|
5.5
|
1.0
|
CD
|
C:ARG36
|
5.0
|
4.0
|
1.0
|
|
Iron binding site 10 out
of 40 in 8c0z
Go back to
Iron Binding Sites List in 8c0z
Iron binding site 10 out
of 40 in the Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe301
b:12.7
occ:1.00
|
FE2
|
C:SF4301
|
0.0
|
12.7
|
1.0
|
SG
|
C:CYS113
|
2.3
|
7.2
|
1.0
|
S4
|
C:SF4301
|
2.3
|
12.7
|
1.0
|
S1
|
C:SF4301
|
2.3
|
12.7
|
1.0
|
S3
|
C:SF4301
|
2.3
|
12.7
|
1.0
|
FE3
|
C:SF4301
|
2.7
|
12.7
|
1.0
|
FE4
|
C:SF4301
|
2.7
|
12.7
|
1.0
|
FE1
|
C:SF4301
|
2.7
|
12.7
|
1.0
|
CB
|
C:CYS113
|
3.5
|
7.2
|
1.0
|
S2
|
C:SF4301
|
3.9
|
12.7
|
1.0
|
CA
|
C:CYS113
|
4.0
|
7.2
|
1.0
|
N
|
C:LEU115
|
4.3
|
13.7
|
1.0
|
N
|
C:ASP114
|
4.4
|
10.9
|
1.0
|
C
|
C:CYS113
|
4.6
|
7.2
|
1.0
|
CA
|
C:LEU115
|
4.6
|
13.7
|
1.0
|
SG
|
C:CYS116
|
4.7
|
17.2
|
1.0
|
SG
|
C:CYS122
|
4.8
|
11.3
|
1.0
|
SG
|
C:CYS22
|
4.9
|
5.5
|
1.0
|
OD1
|
C:ASP114
|
4.9
|
10.9
|
1.0
|
|
Reference:
A.Winiarska,
F.Ramirez-Amador,
D.Hege,
Y.Gemmecker,
S.Prinz,
G.Hochberg,
J.Heider,
M.Szaleniec,
J.M.Schuller.
Cryoem Structure of A Tungsten-Containing Aldehyde Oxidoreductase From Aromatoleum Aromaticum To Be Published.
Page generated: Fri Aug 9 20:23:57 2024
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