Iron in PDB 8fib: Crystal Structure of Erwinia Tracheiphila CYP114

Protein crystallography data

The structure of Crystal Structure of Erwinia Tracheiphila CYP114, PDB code: 8fib was solved by C.E.Stewart Jr., R.Nagel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 67.24 / 1.68
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 92.931, 97.41, 107.6, 90, 90, 90
R / Rfree (%) 16 / 20.4

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Erwinia Tracheiphila CYP114 (pdb code 8fib). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Erwinia Tracheiphila CYP114, PDB code: 8fib:

Iron binding site 1 out of 1 in 8fib

Go back to Iron Binding Sites List in 8fib
Iron binding site 1 out of 1 in the Crystal Structure of Erwinia Tracheiphila CYP114


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Erwinia Tracheiphila CYP114 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe500

b:16.7
occ:1.00
FE A:HEM500 0.0 16.7 1.0
NB A:HEM500 2.0 15.5 1.0
NA A:HEM500 2.0 15.4 1.0
ND A:HEM500 2.0 14.4 1.0
NC A:HEM500 2.0 15.0 1.0
SG A:CYS380 2.4 16.7 1.0
O A:HOH642 2.4 20.8 1.0
C4B A:HEM500 3.0 15.1 1.0
C4A A:HEM500 3.0 16.3 1.0
C1D A:HEM500 3.0 14.0 1.0
C4C A:HEM500 3.0 16.0 1.0
C1B A:HEM500 3.0 15.9 1.0
C1C A:HEM500 3.1 15.1 1.0
C4D A:HEM500 3.1 14.8 1.0
C1A A:HEM500 3.1 15.7 1.0
HB2 A:CYS380 3.2 18.1 1.0
CB A:CYS380 3.4 15.1 1.0
CHC A:HEM500 3.4 14.8 1.0
CHD A:HEM500 3.4 14.1 1.0
CHB A:HEM500 3.4 16.0 1.0
CHA A:HEM500 3.4 14.9 1.0
HA A:CYS380 3.6 18.2 1.0
H A:GLY382 3.8 19.4 1.0
CA A:CYS380 4.0 15.1 1.0
O A:GLY258 4.1 17.2 1.0
HB3 A:CYS380 4.2 18.1 1.0
C3B A:HEM500 4.2 17.1 1.0
C3A A:HEM500 4.2 16.6 1.0
C3C A:HEM500 4.2 16.5 1.0
C2B A:HEM500 4.2 16.1 1.0
C2D A:HEM500 4.3 14.9 1.0
C2C A:HEM500 4.3 16.2 1.0
C2A A:HEM500 4.3 16.6 1.0
HA3 A:GLY258 4.3 19.2 1.0
C3D A:HEM500 4.3 14.7 1.0
H A:LEU381 4.4 19.3 1.0
HD1 A:PHE373 4.4 20.5 1.0
HHC A:HEM500 4.4 17.7 1.0
HHD A:HEM500 4.4 16.9 1.0
HHB A:HEM500 4.4 19.1 1.0
HHA A:HEM500 4.4 17.9 1.0
O A:HOH885 4.5 38.3 1.0
HA2 A:GLY258 4.6 19.2 1.0
O A:HOH884 4.6 27.3 1.0
C A:GLY258 4.6 14.9 1.0
HG1 A:THR262 4.6 23.9 1.0
N A:GLY382 4.6 16.2 1.0
C A:CYS380 4.7 16.3 1.0
N A:LEU381 4.7 16.1 1.0
HA3 A:GLY382 4.7 19.6 1.0
CA A:GLY258 4.7 16.0 1.0
HG21 A:THR262 4.8 23.4 1.0

Reference:

R.Nagel, L.E.Alexander, C.E.Stewart Jr., R.J.Peters. Dual Factors Required For Cytochrome-P450-Mediated Hydrocarbon Ring Contraction in Bacterial Gibberellin Phytohormone Biosynthesis. Proc.Natl.Acad.Sci.Usa V. 120 49120 2023.
ISSN: ESSN 1091-6490
PubMed: 37339230
DOI: 10.1073/PNAS.2221549120
Page generated: Thu Jul 27 17:03:09 2023

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