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Iron in PDB 8flo: X-Ray Crystal Structure of Substrate Free CYP124A1 From Mycobacterium Marinum

Protein crystallography data

The structure of X-Ray Crystal Structure of Substrate Free CYP124A1 From Mycobacterium Marinum, PDB code: 8flo was solved by A.Ghith, J.B.Bruning, S.G.Bell, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.03 / 1.71
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 98.715, 72.827, 65.343, 90, 109.38, 90
R / Rfree (%) 20.4 / 24.9

Iron Binding Sites:

The binding sites of Iron atom in the X-Ray Crystal Structure of Substrate Free CYP124A1 From Mycobacterium Marinum (pdb code 8flo). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the X-Ray Crystal Structure of Substrate Free CYP124A1 From Mycobacterium Marinum, PDB code: 8flo:

Iron binding site 1 out of 1 in 8flo

Go back to Iron Binding Sites List in 8flo
Iron binding site 1 out of 1 in the X-Ray Crystal Structure of Substrate Free CYP124A1 From Mycobacterium Marinum


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of X-Ray Crystal Structure of Substrate Free CYP124A1 From Mycobacterium Marinum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:32.2
occ:1.00
FE A:HEM501 0.0 32.2 1.0
NC A:HEM501 2.1 29.9 1.0
NA A:HEM501 2.1 36.0 1.0
NB A:HEM501 2.1 31.7 1.0
ND A:HEM501 2.1 32.4 1.0
SG A:CYS383 2.3 31.9 1.0
O A:HOH603 2.4 38.8 1.0
C4A A:HEM501 3.1 33.0 1.0
C4C A:HEM501 3.1 31.3 1.0
C4B A:HEM501 3.1 27.4 1.0
C1B A:HEM501 3.1 31.4 1.0
C1C A:HEM501 3.1 31.7 1.0
C4D A:HEM501 3.1 33.1 1.0
C1A A:HEM501 3.1 29.3 1.0
C1D A:HEM501 3.1 31.2 1.0
CB A:CYS383 3.3 29.4 1.0
CHB A:HEM501 3.4 29.8 1.0
CHA A:HEM501 3.5 33.1 1.0
CHC A:HEM501 3.5 29.6 1.0
CHD A:HEM501 3.5 38.0 1.0
CA A:CYS383 4.0 33.8 1.0
O A:ALA271 4.1 31.1 1.0
O A:HOH795 4.1 38.5 1.0
C2B A:HEM501 4.3 27.6 1.0
C3A A:HEM501 4.3 32.3 1.0
C3C A:HEM501 4.3 33.1 1.0
C3B A:HEM501 4.3 26.8 1.0
C2C A:HEM501 4.3 30.4 1.0
C2A A:HEM501 4.3 30.7 1.0
C3D A:HEM501 4.4 26.2 1.0
C2D A:HEM501 4.4 31.4 1.0
N A:GLY385 4.6 34.9 1.0
C A:CYS383 4.6 32.3 1.0
N A:LEU384 4.6 32.0 1.0
C A:ALA271 4.9 38.2 1.0

Reference:

A.Ghith, J.B.Bruning, S.G.Bell. The Catalytic Activity and Structure of the Lipid Metabolizing CYP124 Cytochrome P450 Enzyme From Mycobacterium Marinum. Arch.Biochem.Biophys. V. 737 09554 2023.
ISSN: ESSN 1096-0384
PubMed: 36842492
DOI: 10.1016/J.ABB.2023.109554
Page generated: Sat Aug 10 04:26:06 2024

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