Atomistry » Iron » PDB 8fhc-8gbk » 8fvv
Atomistry »
  Iron »
    PDB 8fhc-8gbk »
      8fvv »

Iron in PDB 8fvv: Rubrerythrin From B. Pseudomallei: Iron-Bound

Protein crystallography data

The structure of Rubrerythrin From B. Pseudomallei: Iron-Bound, PDB code: 8fvv was solved by D.C.F.Monteiro, M.E.Snell, G.R.Budziszewski, S.E.J.Bowman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.90 / 1.93
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 202.17, 202.17, 69.825, 90, 90, 120
R / Rfree (%) 16.1 / 20.9

Iron Binding Sites:

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 12;

Binding sites:

The binding sites of Iron atom in the Rubrerythrin From B. Pseudomallei: Iron-Bound (pdb code 8fvv). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 12 binding sites of Iron where determined in the Rubrerythrin From B. Pseudomallei: Iron-Bound, PDB code: 8fvv:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Iron binding site 1 out of 12 in 8fvv

Go back to Iron Binding Sites List in 8fvv
Iron binding site 1 out of 12 in the Rubrerythrin From B. Pseudomallei: Iron-Bound


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Rubrerythrin From B. Pseudomallei: Iron-Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:21.2
occ:0.62
HD1 A:HIS127 1.3 17.9 0.0
OE1 A:GLU124 1.9 26.6 1.0
OE2 A:GLU90 2.0 26.4 1.0
OE2 B:GLU53 2.1 22.5 1.0
ND1 A:HIS127 2.2 17.2 1.0
O A:HOH325 2.4 21.1 0.5
CD A:GLU90 2.6 29.1 1.0
OE1 A:GLU90 2.6 37.1 1.0
CD A:GLU124 2.8 25.1 1.0
CD B:GLU53 3.0 19.7 1.0
CE1 A:HIS127 3.1 17.3 1.0
OE2 A:GLU124 3.1 35.4 1.0
OE1 B:GLU53 3.2 21.7 1.0
HE1 A:HIS127 3.2 17.1 1.0
CG A:HIS127 3.2 17.5 1.0
HB2 A:HIS127 3.4 17.4 1.0
HB3 A:HIS127 3.4 17.4 1.0
O A:HOH325 3.4 14.0 0.5
HE2 B:TYR27 3.4 17.6 1.0
CB A:HIS127 3.6 17.5 1.0
HA A:GLU124 3.6 18.1 1.0
FE B:FE202 3.8 59.5 0.5
HG23 B:THR49 3.9 16.7 1.0
OH B:TYR27 4.1 18.2 1.0
CG A:GLU90 4.1 28.1 1.0
HG22 B:THR49 4.2 16.7 1.0
CG A:GLU124 4.2 22.6 1.0
NE2 A:HIS127 4.3 16.4 1.0
HG21 B:THR49 4.3 16.7 1.0
CE2 B:TYR27 4.3 17.5 1.0
CG2 B:THR49 4.3 16.4 1.0
CD2 A:HIS127 4.3 16.4 1.0
HG3 A:GLU90 4.3 27.3 1.0
CG B:GLU53 4.4 18.1 1.0
CA A:GLU124 4.5 18.2 1.0
HB3 A:GLU124 4.5 20.1 1.0
HG2 A:GLU90 4.5 27.2 1.0
HG3 B:GLU53 4.6 18.0 1.0
HG2 B:GLU53 4.6 18.0 1.0
HD1 B:HIS56 4.6 17.6 0.0
CB A:GLU124 4.6 20.1 1.0
HG3 A:GLU124 4.6 22.6 1.0
HE1 B:HIS56 4.7 17.0 1.0
HE2 A:TYR131 4.7 18.8 1.0
CZ B:TYR27 4.7 17.8 1.0
HH B:TYR27 4.7 18.2 0.0
OE1 A:GLU93 4.7 33.4 1.0
HG2 A:GLU124 4.8 22.6 1.0
HB3 A:GLU90 4.9 24.0 1.0
OE2 A:GLU93 5.0 39.5 1.0
HA A:GLU90 5.0 20.9 1.0

Iron binding site 2 out of 12 in 8fvv

Go back to Iron Binding Sites List in 8fvv
Iron binding site 2 out of 12 in the Rubrerythrin From B. Pseudomallei: Iron-Bound


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Rubrerythrin From B. Pseudomallei: Iron-Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe202

b:30.1
occ:0.22
HD1 A:HIS56 1.5 19.6 0.0
OE2 B:GLU124 1.9 33.1 1.0
OE1 A:GLU53 1.9 21.4 1.0
OE2 A:GLU20 1.9 39.7 1.0
ND1 A:HIS56 2.4 20.0 1.0
CD A:GLU20 2.4 32.6 1.0
OE1 A:GLU20 2.6 44.7 1.0
CD A:GLU53 3.1 20.1 1.0
CD B:GLU124 3.1 27.3 1.0
HB2 A:HIS56 3.1 18.5 1.0
HA A:GLU53 3.2 16.7 1.0
CG A:HIS56 3.3 18.8 1.0
CE1 A:HIS56 3.4 22.2 1.0
CB A:HIS56 3.5 18.7 1.0
O B:HOH336 3.5 24.4 1.0
HB3 A:HIS56 3.5 18.5 1.0
HE1 A:HIS56 3.6 21.5 1.0
OE2 A:GLU53 3.6 22.3 1.0
CG A:GLU20 3.7 28.1 1.0
FE B:FE201 3.8 34.8 1.0
OE1 B:GLU124 3.8 29.4 1.0
HG3 A:GLU20 3.8 28.2 1.0
HE2 B:TYR98 4.0 24.8 1.0
HE1 B:HIS127 4.0 20.0 1.0
CA A:GLU53 4.1 16.3 1.0
HB3 A:GLU20 4.1 24.2 1.0
CG B:GLU124 4.2 24.7 1.0
HG2 B:GLU124 4.2 24.5 1.0
HD1 B:HIS127 4.2 20.5 0.0
HB3 A:GLU53 4.3 17.9 1.0
CG A:GLU53 4.3 19.4 1.0
HG3 B:GLU124 4.3 24.6 1.0
HD12 B:LEU120 4.3 23.4 1.0
HG2 A:GLU20 4.4 28.0 1.0
CB A:GLU53 4.4 17.9 1.0
OE1 B:GLU93 4.4 39.0 1.0
CD2 A:HIS56 4.4 19.4 1.0
CB A:GLU20 4.5 24.4 1.0
NE2 A:HIS56 4.5 21.6 1.0
OH B:TYR98 4.5 25.8 1.0
HA A:GLU20 4.5 20.8 1.0
CE1 B:HIS127 4.7 20.6 1.0
N A:GLU53 4.7 16.6 1.0
ND1 B:HIS127 4.7 19.9 1.0
HB3 B:LEU120 4.8 24.2 1.0
HG3 A:GLU53 4.8 19.2 1.0
CE2 B:TYR98 4.8 23.9 1.0
O A:GLY52 4.9 19.1 1.0
HG2 A:GLU53 4.9 19.1 1.0

Iron binding site 3 out of 12 in 8fvv

Go back to Iron Binding Sites List in 8fvv
Iron binding site 3 out of 12 in the Rubrerythrin From B. Pseudomallei: Iron-Bound


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Rubrerythrin From B. Pseudomallei: Iron-Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:34.8
occ:1.00
HD1 B:HIS127 1.4 20.5 0.0
OE1 B:GLU124 1.9 29.4 1.0
OE2 A:GLU53 2.0 22.3 1.0
OE2 B:GLU90 2.2 36.4 1.0
ND1 B:HIS127 2.3 19.9 1.0
OE1 B:GLU90 2.5 48.3 1.0
CD B:GLU90 2.6 38.0 1.0
CD B:GLU124 2.8 27.3 1.0
O B:HOH336 2.8 24.4 1.0
OE2 B:GLU124 2.9 33.1 1.0
CD A:GLU53 2.9 20.1 1.0
OE1 A:GLU53 3.2 21.4 1.0
CE1 B:HIS127 3.2 20.6 1.0
CG B:HIS127 3.3 19.1 1.0
HE1 B:HIS127 3.4 20.0 1.0
HB2 B:HIS127 3.4 19.2 1.0
HB3 B:HIS127 3.4 19.2 1.0
HE2 A:TYR27 3.5 15.4 1.0
CB B:HIS127 3.6 19.4 1.0
HA B:GLU124 3.7 20.8 1.0
HG23 A:THR49 3.8 16.6 1.0
FE A:FE202 3.8 30.1 0.2
OH A:TYR27 4.1 16.5 1.0
HG22 A:THR49 4.1 16.6 1.0
CG B:GLU90 4.2 31.9 1.0
CG B:GLU124 4.2 24.7 1.0
HG21 A:THR49 4.2 16.6 1.0
CG2 A:THR49 4.2 16.7 1.0
CG A:GLU53 4.3 19.4 1.0
CE2 A:TYR27 4.4 15.3 1.0
NE2 B:HIS127 4.4 18.8 1.0
CD2 B:HIS127 4.4 18.8 1.0
HD1 A:HIS56 4.5 19.6 0.0
HG3 B:GLU90 4.5 31.7 1.0
HG2 A:GLU53 4.5 19.1 1.0
HG3 A:GLU53 4.5 19.2 1.0
HG2 B:GLU90 4.6 31.4 1.0
HB3 B:GLU124 4.6 22.1 1.0
CA B:GLU124 4.6 20.6 1.0
HE2 B:TYR131 4.6 20.0 1.0
HG3 B:GLU124 4.6 24.6 1.0
OE1 B:GLU93 4.6 39.0 1.0
HH A:TYR27 4.7 16.7 0.0
CB B:GLU124 4.7 21.7 1.0
CZ A:TYR27 4.7 15.3 1.0
HG2 B:GLU124 4.8 24.5 1.0
HB3 B:GLU90 4.8 26.6 1.0
O A:HOH397 4.8 10.9 0.1
OE1 A:GLU20 4.9 44.7 1.0
HE1 A:HIS56 4.9 21.5 1.0
HB1 A:ALA23 4.9 15.4 1.0

Iron binding site 4 out of 12 in 8fvv

Go back to Iron Binding Sites List in 8fvv
Iron binding site 4 out of 12 in the Rubrerythrin From B. Pseudomallei: Iron-Bound


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Rubrerythrin From B. Pseudomallei: Iron-Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe202

b:59.5
occ:0.45
HD1 B:HIS56 1.6 17.6 0.0
OE2 B:GLU20 1.9 37.7 1.0
OE2 A:GLU124 1.9 35.4 1.0
OE1 B:GLU53 2.1 21.7 1.0
ND1 B:HIS56 2.4 17.0 1.0
OE1 B:GLU20 2.5 33.9 1.0
CD B:GLU20 2.5 33.2 1.0
O A:HOH325 2.6 14.0 0.5
CD A:GLU124 3.0 25.1 1.0
CD B:GLU53 3.1 19.7 1.0
CE1 B:HIS56 3.3 17.2 1.0
HB2 B:HIS56 3.4 16.0 1.0
HE1 B:HIS56 3.4 17.0 1.0
HA B:GLU53 3.4 15.8 1.0
CG B:HIS56 3.5 17.0 1.0
OE1 A:GLU124 3.6 26.6 1.0
OE2 B:GLU53 3.7 22.5 1.0
FE A:FE201 3.8 21.2 0.6
CB B:HIS56 3.8 15.2 1.0
O A:HOH325 3.8 21.1 0.5
HB3 B:HIS56 3.8 15.9 1.0
CG B:GLU20 3.9 25.6 1.0
HE2 A:TYR98 4.0 22.4 1.0
OE1 A:GLU93 4.0 33.4 1.0
HE1 A:HIS127 4.1 17.1 1.0
CG A:GLU124 4.1 22.6 1.0
HG2 A:GLU124 4.2 22.6 1.0
HG3 B:GLU20 4.2 26.0 1.0
HG3 A:GLU124 4.3 22.6 1.0
HB3 B:GLU53 4.3 16.6 1.0
CG B:GLU53 4.3 18.1 1.0
CA B:GLU53 4.3 15.9 1.0
HD1 A:HIS127 4.3 17.9 0.0
HB3 B:GLU20 4.4 21.4 1.0
HA B:GLU20 4.5 18.1 1.0
NE2 B:HIS56 4.5 16.6 1.0
HG2 B:GLU20 4.5 25.9 1.0
CB B:GLU53 4.5 16.2 1.0
CD2 B:HIS56 4.6 16.8 1.0
OH A:TYR98 4.6 21.4 1.0
CB B:GLU20 4.7 21.2 1.0
HD12 A:LEU120 4.7 21.0 1.0
CE1 A:HIS127 4.7 17.3 1.0
HB3 A:LEU120 4.8 19.9 1.0
CE2 A:TYR98 4.8 23.4 1.0
HG3 B:GLU53 4.8 18.0 1.0
ND1 A:HIS127 4.8 17.2 1.0
N B:GLU53 5.0 15.4 1.0
HG2 B:GLU53 5.0 18.0 1.0

Iron binding site 5 out of 12 in 8fvv

Go back to Iron Binding Sites List in 8fvv
Iron binding site 5 out of 12 in the Rubrerythrin From B. Pseudomallei: Iron-Bound


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Rubrerythrin From B. Pseudomallei: Iron-Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe201

b:21.6
occ:0.59
HD1 C:HIS127 1.3 18.2 0.0
OE1 C:GLU124 1.9 27.2 1.0
OE2 C:GLU90 2.0 23.8 1.0
OE2 D:GLU53 2.0 21.2 1.0
ND1 C:HIS127 2.2 18.0 1.0
O D:HOH313 2.5 6.8 0.5
OE1 C:GLU90 2.5 34.0 1.0
CD C:GLU90 2.5 27.3 1.0
CD D:GLU53 2.9 18.0 1.0
CD C:GLU124 2.9 24.4 1.0
OE1 D:GLU53 3.1 20.1 1.0
CE1 C:HIS127 3.2 18.5 1.0
CG C:HIS127 3.3 17.9 1.0
HE1 C:HIS127 3.3 18.3 1.0
HE2 D:TYR27 3.3 19.2 1.0
HB2 C:HIS127 3.3 17.7 1.0
OE2 C:GLU124 3.4 30.8 1.0
HB3 C:HIS127 3.5 17.8 1.0
CB C:HIS127 3.6 17.7 1.0
HA C:GLU124 3.6 16.4 1.0
HG23 D:THR49 3.9 17.1 1.0
CG C:GLU90 4.0 25.0 1.0
O D:HOH313 4.1 22.0 0.5
HG22 D:THR49 4.2 17.1 1.0
CE2 D:TYR27 4.2 19.4 1.0
OH D:TYR27 4.2 20.1 1.0
HG21 D:THR49 4.2 17.1 1.0
FE D:FE202 4.2 58.0 0.5
CG C:GLU124 4.3 21.1 1.0
HG3 C:GLU90 4.3 24.7 1.0
CG D:GLU53 4.3 17.2 1.0
CG2 D:THR49 4.3 16.8 1.0
NE2 C:HIS127 4.3 18.2 1.0
CD2 C:HIS127 4.4 17.5 1.0
HG2 C:GLU90 4.4 24.6 1.0
HG3 D:GLU53 4.5 17.1 1.0
HD2 D:HIS56 4.5 18.8 1.0
CA C:GLU124 4.5 16.6 1.0
HG2 D:GLU53 4.6 17.0 1.0
HB3 C:GLU124 4.6 18.3 1.0
HE2 C:TYR131 4.6 19.0 1.0
HG3 C:GLU124 4.6 21.1 1.0
CB C:GLU124 4.7 17.9 1.0
CZ D:TYR27 4.7 19.4 1.0
OE1 C:GLU93 4.8 37.9 1.0
HB3 C:GLU90 4.8 21.8 1.0
HH D:TYR27 4.9 20.1 0.0
HG2 C:GLU124 4.9 21.0 1.0
HE2 D:HIS56 4.9 20.9 0.0
HB1 D:ALA23 4.9 16.9 1.0
HA C:GLU90 5.0 18.9 1.0
CB C:GLU90 5.0 21.8 1.0
OE2 C:GLU93 5.0 39.5 1.0

Iron binding site 6 out of 12 in 8fvv

Go back to Iron Binding Sites List in 8fvv
Iron binding site 6 out of 12 in the Rubrerythrin From B. Pseudomallei: Iron-Bound


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Rubrerythrin From B. Pseudomallei: Iron-Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Fe202

b:36.2
occ:0.22
HD1 C:HIS56 1.1 20.9 0.0
OE1 C:GLU53 1.9 28.2 1.0
OE2 D:GLU124 1.9 34.0 1.0
ND1 C:HIS56 2.0 20.4 1.0
OE2 C:GLU20 2.2 39.5 1.0
CE1 C:HIS56 2.9 20.1 1.0
CD C:GLU20 2.9 39.5 1.0
CD D:GLU124 3.0 27.8 1.0
CG C:HIS56 3.0 19.6 1.0
CD C:GLU53 3.1 23.4 1.0
HE1 C:HIS56 3.1 20.4 1.0
HA C:GLU53 3.1 17.8 1.0
HB2 C:HIS56 3.1 19.4 1.0
OE1 D:GLU124 3.4 30.3 1.0
OE1 C:GLU20 3.4 52.0 1.0
CB C:HIS56 3.4 19.4 1.0
HB3 C:HIS56 3.5 19.4 1.0
OE2 C:GLU53 3.6 27.3 1.0
FE D:FE201 3.8 27.5 0.8
O C:HOH345 3.8 27.6 1.0
HE1 D:HIS127 3.9 22.3 1.0
HG3 C:GLU20 4.0 30.9 1.0
CA C:GLU53 4.0 17.7 1.0
NE2 C:HIS56 4.0 21.1 1.0
CG C:GLU20 4.0 30.9 1.0
CD2 C:HIS56 4.1 19.6 1.0
HD1 D:HIS127 4.2 18.2 0.0
HD12 D:LEU120 4.2 25.9 1.0
CG C:GLU53 4.2 20.4 1.0
CG D:GLU124 4.3 24.9 1.0
HG2 D:GLU124 4.3 25.0 1.0
HB3 C:GLU53 4.3 18.9 1.0
HE2 D:TYR98 4.4 30.4 1.0
CB C:GLU53 4.4 18.8 1.0
HB3 C:GLU20 4.4 25.6 1.0
CE1 D:HIS127 4.5 23.4 1.0
HG3 D:GLU124 4.5 25.1 1.0
N C:GLU53 4.5 17.1 1.0
OE1 D:GLU93 4.6 37.4 1.0
ND1 D:HIS127 4.6 20.0 1.0
O C:GLY52 4.7 17.8 1.0
OH D:TYR98 4.7 29.9 1.0
HA C:GLU20 4.8 22.6 1.0
CB C:GLU20 4.8 24.6 1.0
HG2 C:GLU20 4.8 30.9 1.0
C C:GLY52 4.8 18.3 1.0
HE2 C:HIS56 4.8 21.5 0.0
HG2 C:GLU53 4.8 20.7 1.0
HG3 C:GLU53 4.8 20.7 1.0
H C:HIS56 4.9 19.2 1.0
HB3 D:LEU120 4.9 23.8 1.0
CA C:HIS56 4.9 19.1 1.0
HD2 C:HIS56 5.0 19.9 1.0

Iron binding site 7 out of 12 in 8fvv

Go back to Iron Binding Sites List in 8fvv
Iron binding site 7 out of 12 in the Rubrerythrin From B. Pseudomallei: Iron-Bound


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Rubrerythrin From B. Pseudomallei: Iron-Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe201

b:27.5
occ:0.82
HD1 D:HIS127 1.4 18.2 0.0
OE1 D:GLU124 1.8 30.3 1.0
OE2 C:GLU53 2.1 27.3 1.0
OE2 D:GLU90 2.1 30.2 1.0
ND1 D:HIS127 2.3 20.0 1.0
OE1 D:GLU90 2.5 49.9 1.0
CD D:GLU90 2.6 36.2 1.0
O C:HOH345 2.7 27.6 1.0
CD D:GLU124 2.9 27.8 1.0
CD C:GLU53 3.0 23.4 1.0
OE1 C:GLU53 3.2 28.2 1.0
CE1 D:HIS127 3.3 23.4 1.0
CG D:HIS127 3.3 21.9 1.0
HB2 D:HIS127 3.3 22.5 1.0
OE2 D:GLU124 3.3 34.0 1.0
HE1 D:HIS127 3.4 22.3 1.0
HB3 D:HIS127 3.4 22.5 1.0
HE2 C:TYR27 3.5 20.4 1.0
CB D:HIS127 3.6 22.4 1.0
HA D:GLU124 3.7 22.9 1.0
FE C:FE202 3.8 36.2 0.2
HG23 C:THR49 3.9 19.7 1.0
HG22 C:THR49 4.0 19.7 1.0
OH C:TYR27 4.1 23.8 1.0
CG D:GLU90 4.1 32.0 1.0
CG D:GLU124 4.2 24.9 1.0
CG2 C:THR49 4.3 19.3 1.0
HG21 C:THR49 4.3 19.7 1.0
CE2 C:TYR27 4.3 20.4 1.0
CG C:GLU53 4.4 20.4 1.0
NE2 D:HIS127 4.4 22.3 1.0
CD2 D:HIS127 4.4 21.3 1.0
HB3 D:GLU124 4.4 23.3 1.0
HG3 D:GLU90 4.5 32.1 1.0
OE1 D:GLU93 4.5 37.4 1.0
CA D:GLU124 4.5 23.2 1.0
HG2 C:GLU53 4.5 20.7 1.0
HG2 D:GLU90 4.5 32.0 1.0
HD1 C:HIS56 4.6 20.9 0.0
HG3 D:GLU124 4.6 25.1 1.0
HG3 C:GLU53 4.6 20.7 1.0
CB D:GLU124 4.6 22.6 1.0
HE1 C:HIS56 4.7 20.4 1.0
HE2 D:TYR131 4.7 21.8 1.0
HH C:TYR27 4.7 24.6 0.0
CZ C:TYR27 4.7 21.4 1.0
HB3 D:GLU90 4.8 29.2 1.0
HG2 D:GLU124 4.8 25.0 1.0
O C:HOH342 4.8 43.6 1.0
HA D:GLU90 4.9 27.0 1.0
HB1 C:ALA23 5.0 17.7 1.0

Iron binding site 8 out of 12 in 8fvv

Go back to Iron Binding Sites List in 8fvv
Iron binding site 8 out of 12 in the Rubrerythrin From B. Pseudomallei: Iron-Bound


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Rubrerythrin From B. Pseudomallei: Iron-Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Fe202

b:58.0
occ:0.46
OE1 D:GLU20 1.8 35.8 1.0
HD2 D:HIS56 1.8 18.8 1.0
OE2 C:GLU124 1.9 30.8 1.0
OE2 D:GLU20 2.1 34.1 1.0
CD D:GLU20 2.2 32.3 1.0
OE1 D:GLU53 2.6 20.1 1.0
CD2 D:HIS56 2.6 18.3 1.0
O D:HOH313 2.8 22.0 0.5
CD C:GLU124 3.1 24.4 1.0
HB2 D:HIS56 3.2 17.4 1.0
CG D:HIS56 3.3 17.2 1.0
HB3 D:HIS56 3.4 17.3 1.0
HA D:GLU53 3.5 14.9 1.0
CB D:HIS56 3.5 17.6 1.0
CD D:GLU53 3.6 18.0 1.0
HE2 C:TYR98 3.6 20.8 1.0
CG D:GLU20 3.6 26.2 1.0
NE2 D:HIS56 3.7 20.1 1.0
OE1 C:GLU124 3.7 27.2 1.0
O D:HOH313 3.7 6.8 0.5
HD12 C:LEU120 3.8 20.7 1.0
OE1 C:GLU93 3.9 37.9 1.0
HG3 D:GLU20 3.9 26.8 1.0
HE2 D:HIS56 3.9 20.9 0.0
OE2 D:GLU53 4.1 21.2 1.0
HG2 D:GLU20 4.2 26.6 1.0
CG C:GLU124 4.2 21.1 1.0
HG2 C:GLU124 4.2 21.0 1.0
OH C:TYR98 4.2 19.2 1.0
HA D:GLU20 4.2 21.0 1.0
FE C:FE201 4.2 21.6 0.6
HG3 C:GLU124 4.2 21.1 1.0
HB3 D:GLU53 4.3 15.9 1.0
HB3 D:GLU20 4.3 23.5 1.0
CE2 C:TYR98 4.4 21.5 1.0
CA D:GLU53 4.4 14.9 1.0
CB D:GLU20 4.5 23.3 1.0
ND1 D:HIS56 4.5 19.8 1.0
CG D:GLU53 4.6 17.2 1.0
CB D:GLU53 4.6 15.8 1.0
HE1 C:HIS127 4.6 18.3 1.0
CE1 D:HIS56 4.7 18.5 1.0
HB3 C:LEU120 4.7 19.7 1.0
CZ C:TYR98 4.7 21.1 1.0
CD1 C:LEU120 4.8 20.7 1.0
HD1 C:HIS127 4.8 18.2 0.0
HH C:TYR98 4.9 18.8 0.0
CA D:GLU20 4.9 21.3 1.0
HD13 C:LEU120 5.0 20.8 1.0
CD C:GLU93 5.0 30.9 1.0

Iron binding site 9 out of 12 in 8fvv

Go back to Iron Binding Sites List in 8fvv
Iron binding site 9 out of 12 in the Rubrerythrin From B. Pseudomallei: Iron-Bound


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 9 of Rubrerythrin From B. Pseudomallei: Iron-Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Fe201

b:23.7
occ:0.74
HD1 E:HIS127 1.2 15.8 0.0
OE2 F:GLU53 2.0 24.3 1.0
ND1 E:HIS127 2.1 16.8 1.0
OE1 E:GLU124 2.1 27.4 1.0
OE1 E:GLU90 2.4 42.3 1.0
OE2 E:GLU90 2.4 58.1 1.0
OE2 E:GLU124 2.6 26.7 1.0
CD E:GLU124 2.7 26.5 1.0
CD E:GLU90 2.7 40.0 1.0
O F:HOH338 2.7 28.6 1.0
CD F:GLU53 2.9 24.1 1.0
CE1 E:HIS127 3.0 18.0 1.0
HE1 E:HIS127 3.1 17.9 1.0
CG E:HIS127 3.2 17.5 1.0
OE1 F:GLU53 3.2 29.4 1.0
HB2 E:HIS127 3.4 18.3 1.0
HE2 F:TYR27 3.4 21.5 1.0
HB3 E:HIS127 3.4 18.4 1.0
CB E:HIS127 3.6 18.3 1.0
HA E:GLU124 3.7 20.8 1.0
HG23 F:THR49 3.8 19.1 1.0
FE F:FE202 3.8 88.8 0.5
OH F:TYR27 4.0 24.9 1.0
HG22 F:THR49 4.1 19.1 1.0
HG21 F:THR49 4.1 19.1 1.0
CG E:GLU90 4.2 33.6 1.0
CG E:GLU124 4.2 24.4 1.0
CG2 F:THR49 4.2 18.8 1.0
NE2 E:HIS127 4.2 18.7 1.0
CE2 F:TYR27 4.2 21.9 1.0
CD2 E:HIS127 4.3 18.6 1.0
CG F:GLU53 4.3 22.9 1.0
HG2 F:GLU53 4.5 23.1 1.0
HG3 F:GLU53 4.5 23.1 1.0
HG3 E:GLU90 4.5 33.4 1.0
HB3 E:GLU90 4.6 27.9 1.0
HH F:TYR27 4.6 25.4 0.0
HG3 E:GLU124 4.6 24.1 1.0
OE2 E:GLU93 4.6 37.8 1.0
HD1 F:HIS56 4.6 20.1 0.0
CZ F:TYR27 4.6 21.9 1.0
CA E:GLU124 4.6 20.5 1.0
O F:HOH326 4.7 44.4 1.0
HE2 E:TYR131 4.7 20.3 1.0
HG2 E:GLU124 4.7 24.0 1.0
HG2 E:GLU90 4.7 33.1 1.0
CB E:GLU124 4.8 21.1 1.0
HE1 F:HIS56 4.8 19.6 1.0
HB3 E:GLU124 4.9 21.7 1.0
CB E:GLU90 4.9 27.3 1.0

Iron binding site 10 out of 12 in 8fvv

Go back to Iron Binding Sites List in 8fvv
Iron binding site 10 out of 12 in the Rubrerythrin From B. Pseudomallei: Iron-Bound


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 10 of Rubrerythrin From B. Pseudomallei: Iron-Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Fe202

b:66.2
occ:0.43
HD1 E:HIS56 1.7 17.8 0.0
OE1 E:GLU53 1.8 25.5 1.0
OE2 E:GLU20 2.0 43.5 1.0
OE2 F:GLU124 2.2 34.0 1.0
CD E:GLU20 2.4 33.3 1.0
OE1 E:GLU20 2.5 44.9 1.0
ND1 E:HIS56 2.6 18.1 1.0
CD E:GLU53 2.9 23.1 1.0
O F:HOH331 3.1 32.6 1.0
HA E:GLU53 3.2 20.6 1.0
CD F:GLU124 3.3 31.0 1.0
HB2 E:HIS56 3.3 19.0 1.0
OE2 E:GLU53 3.4 23.7 1.0
CE1 E:HIS56 3.5 19.1 1.0
CG E:HIS56 3.5 18.4 1.0
HE1 E:HIS56 3.6 18.6 1.0
FE F:FE201 3.7 31.8 0.9
CG E:GLU20 3.7 29.0 1.0
HB3 E:HIS56 3.7 19.0 1.0
CB E:HIS56 3.7 18.9 1.0
HG3 E:GLU20 4.0 28.8 1.0
HB3 E:GLU20 4.0 24.9 1.0
OE1 F:GLU124 4.0 34.4 1.0
HB3 E:GLU53 4.0 21.8 1.0
CG E:GLU53 4.0 22.5 1.0
CA E:GLU53 4.1 20.6 1.0
HE2 F:TYR98 4.1 29.0 1.0
OE1 F:GLU93 4.2 39.5 1.0
HE1 F:HIS127 4.2 23.8 1.0
CB E:GLU53 4.3 22.1 1.0
HA E:GLU20 4.3 22.9 1.0
HG2 F:GLU124 4.3 28.8 1.0
HD1 F:HIS127 4.3 23.3 0.0
CG F:GLU124 4.3 28.6 1.0
CB E:GLU20 4.4 24.3 1.0
HG3 F:GLU124 4.4 28.8 1.0
HG2 E:GLU20 4.4 28.6 1.0
HG3 E:GLU53 4.5 22.5 1.0
NE2 E:HIS56 4.6 18.0 1.0
CD2 E:HIS56 4.7 17.9 1.0
OH F:TYR98 4.7 26.7 1.0
HG2 E:GLU53 4.7 22.5 1.0
N E:GLU53 4.8 20.3 1.0
HB3 E:ALA23 4.8 19.2 1.0
CE1 F:HIS127 4.8 24.4 1.0
HG F:LEU120 4.9 26.6 1.0
ND1 F:HIS127 4.9 23.1 1.0
CA E:GLU20 4.9 22.8 1.0
CE2 F:TYR98 4.9 29.5 1.0

Reference:

D.C.F.Monteiro, M.E.Snell, G.R.Budziszewski, S.E.J.Bowman. Rubrerythrin From B. Pseudomallei: Iron-Bound To Be Published.
Page generated: Sat Aug 10 04:34:33 2024

Last articles

Al in 2IHB
Al in 2HF7
Al in 2GJ8
Al in 2GJ9
Al in 2GTP
Al in 2GJA
Al in 2G83
Al in 2CNW
Al in 2F90
Al in 2G08
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy