Iron in PDB 8ips: Cryo-Em Structure of Heme Transporter Cyddc From Escherichia Coli in the Inward Facing Heme Loading State

The binding sites of Iron atom in the Cryo-Em Structure of Heme Transporter Cyddc From Escherichia Coli in the Inward Facing Heme Loading State (pdb code 8ips). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Cryo-Em Structure of Heme Transporter Cyddc From Escherichia Coli in the Inward Facing Heme Loading State, PDB code: 8ips:

Iron binding site 1 out of 1 in the Cryo-Em Structure of Heme Transporter Cyddc From Escherichia Coli in the Inward Facing Heme Loading State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cryo-Em Structure of Heme Transporter Cyddc From Escherichia Coli in the Inward Facing Heme Loading State within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe601 b:38.6 occ:1.00 FE A:HEM601 0.0 38.6 1.0 ND A:HEM601 1.9 38.6 1.0 NA A:HEM601 2.0 38.6 1.0 NC A:HEM601 2.1 38.6 1.0 NB A:HEM601 2.1 38.6 1.0 NE2 B:HIS312 2.2 18.3 1.0 NE2 A:HIS85 2.3 11.1 1.0 C4D A:HEM601 2.8 38.6 1.0 C1D A:HEM601 2.9 38.6 1.0 C1A A:HEM601 2.9 38.6 1.0 CE1 A:HIS85 3.0 11.1 1.0 C4C A:HEM601 3.0 38.6 1.0 C4A A:HEM601 3.0 38.6 1.0 C4B A:HEM601 3.1 38.6 1.0 C1B A:HEM601 3.1 38.6 1.0 C1C A:HEM601 3.1 38.6 1.0 CD2 B:HIS312 3.1 18.3 1.0 CE1 B:HIS312 3.2 18.3 1.0 CHA A:HEM601 3.3 38.6 1.0 CHD A:HEM601 3.3 38.6 1.0 CD2 A:HIS85 3.5 11.1 1.0 CHB A:HEM601 3.5 38.6 1.0 CHC A:HEM601 3.5 38.6 1.0 C2A A:HEM601 4.1 38.6 1.0 C3D A:HEM601 4.1 38.6 1.0 C2D A:HEM601 4.1 38.6 1.0 C3A A:HEM601 4.1 38.6 1.0 ND1 A:HIS85 4.2 11.1 1.0 C3C A:HEM601 4.2 38.6 1.0 C2C A:HEM601 4.3 38.6 1.0 C2B A:HEM601 4.3 38.6 1.0 ND1 B:HIS312 4.3 18.3 1.0 C3B A:HEM601 4.3 38.6 1.0 CG B:HIS312 4.3 18.3 1.0 CG A:HIS85 4.5 11.1 1.0

C.Zhu, Y.Shi, J.Yu, W.Zhao, L.Li, L.Jingxi, X.Yang, B.Zhang, Y.Zhao, Y.Gao, X.Chen, X.Yang, L.Zhang, L.W.Guddat, L.Liu, H.Yang, Z.Rao, J.Li. Cryo-Em Structures of A Prokaryotic Heme Transporter Cyddc. Protein Cell 2023.
ISSN: ESSN 1674-8018
PubMed: 37144855
DOI: 10.1093/PROCEL/PWAD022