Iron in PDB 8zno: Cryo-Em Structure of Arachis Hypogaea BC1 Complex
Enzymatic activity of Cryo-Em Structure of Arachis Hypogaea BC1 Complex
All present enzymatic activity of Cryo-Em Structure of Arachis Hypogaea BC1 Complex:
7.1.1.8;
Other elements in 8zno:
The structure of Cryo-Em Structure of Arachis Hypogaea BC1 Complex also contains other interesting chemical elements:
Iron Binding Sites:
The binding sites of Iron atom in the Cryo-Em Structure of Arachis Hypogaea BC1 Complex
(pdb code 8zno). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 10 binding sites of Iron where determined in the
Cryo-Em Structure of Arachis Hypogaea BC1 Complex, PDB code: 8zno:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 10 in 8zno
Go back to
Iron Binding Sites List in 8zno
Iron binding site 1 out
of 10 in the Cryo-Em Structure of Arachis Hypogaea BC1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Cryo-Em Structure of Arachis Hypogaea BC1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe403
b:61.4
occ:1.00
|
FE
|
C:HEM403
|
0.0
|
61.4
|
1.0
|
|
NA
|
C:HEM403
|
2.0
|
61.4
|
1.0
|
|
NB
|
C:HEM403
|
2.0
|
61.4
|
1.0
|
|
ND
|
C:HEM403
|
2.0
|
61.4
|
1.0
|
|
NC
|
C:HEM403
|
2.0
|
61.4
|
1.0
|
|
NE2
|
C:HIS187
|
2.5
|
61.4
|
1.0
|
|
NE2
|
C:HIS86
|
2.5
|
61.4
|
1.0
|
|
C4A
|
C:HEM403
|
3.0
|
61.4
|
1.0
|
|
C1B
|
C:HEM403
|
3.0
|
61.4
|
1.0
|
|
C1A
|
C:HEM403
|
3.0
|
61.4
|
1.0
|
|
C1D
|
C:HEM403
|
3.1
|
61.4
|
1.0
|
|
C4B
|
C:HEM403
|
3.1
|
61.4
|
1.0
|
|
C4D
|
C:HEM403
|
3.1
|
61.4
|
1.0
|
|
C4C
|
C:HEM403
|
3.1
|
61.4
|
1.0
|
|
C1C
|
C:HEM403
|
3.1
|
61.4
|
1.0
|
|
CD2
|
C:HIS187
|
3.2
|
61.4
|
1.0
|
|
CD2
|
C:HIS86
|
3.3
|
61.4
|
1.0
|
|
CHB
|
C:HEM403
|
3.4
|
61.4
|
1.0
|
|
CHA
|
C:HEM403
|
3.4
|
61.4
|
1.0
|
|
CHD
|
C:HEM403
|
3.4
|
61.4
|
1.0
|
|
CHC
|
C:HEM403
|
3.4
|
61.4
|
1.0
|
|
CE1
|
C:HIS187
|
3.6
|
61.4
|
1.0
|
|
CE1
|
C:HIS86
|
3.6
|
61.4
|
1.0
|
|
C3A
|
C:HEM403
|
4.2
|
61.4
|
1.0
|
|
C2A
|
C:HEM403
|
4.3
|
61.4
|
1.0
|
|
C2B
|
C:HEM403
|
4.3
|
61.4
|
1.0
|
|
C2D
|
C:HEM403
|
4.3
|
61.4
|
1.0
|
|
C3B
|
C:HEM403
|
4.3
|
61.4
|
1.0
|
|
C3D
|
C:HEM403
|
4.3
|
61.4
|
1.0
|
|
C2C
|
C:HEM403
|
4.3
|
61.4
|
1.0
|
|
C3C
|
C:HEM403
|
4.3
|
61.4
|
1.0
|
|
CG
|
C:HIS187
|
4.4
|
61.4
|
1.0
|
|
CG
|
C:HIS86
|
4.5
|
61.4
|
1.0
|
|
ND1
|
C:HIS187
|
4.6
|
61.4
|
1.0
|
|
ND1
|
C:HIS86
|
4.6
|
61.4
|
1.0
|
|
Iron binding site 2 out
of 10 in 8zno
Go back to
Iron Binding Sites List in 8zno
Iron binding site 2 out
of 10 in the Cryo-Em Structure of Arachis Hypogaea BC1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Cryo-Em Structure of Arachis Hypogaea BC1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe404
b:61.4
occ:1.00
|
FE
|
C:HEM404
|
0.0
|
61.4
|
1.0
|
|
NB
|
C:HEM404
|
2.0
|
61.4
|
1.0
|
|
NA
|
C:HEM404
|
2.0
|
61.4
|
1.0
|
|
NC
|
C:HEM404
|
2.0
|
61.4
|
1.0
|
|
ND
|
C:HEM404
|
2.0
|
61.4
|
1.0
|
|
NE2
|
C:HIS100
|
2.6
|
61.4
|
1.0
|
|
NE2
|
C:HIS201
|
2.6
|
61.4
|
1.0
|
|
CD2
|
C:HIS100
|
2.9
|
61.4
|
1.0
|
|
C1B
|
C:HEM404
|
3.0
|
61.4
|
1.0
|
|
C4B
|
C:HEM404
|
3.0
|
61.4
|
1.0
|
|
C4A
|
C:HEM404
|
3.0
|
61.4
|
1.0
|
|
C1D
|
C:HEM404
|
3.1
|
61.4
|
1.0
|
|
C1C
|
C:HEM404
|
3.1
|
61.4
|
1.0
|
|
C1A
|
C:HEM404
|
3.1
|
61.4
|
1.0
|
|
C4C
|
C:HEM404
|
3.1
|
61.4
|
1.0
|
|
C4D
|
C:HEM404
|
3.1
|
61.4
|
1.0
|
|
CHB
|
C:HEM404
|
3.4
|
61.4
|
1.0
|
|
CHC
|
C:HEM404
|
3.4
|
61.4
|
1.0
|
|
CHD
|
C:HEM404
|
3.4
|
61.4
|
1.0
|
|
CHA
|
C:HEM404
|
3.4
|
61.4
|
1.0
|
|
CD2
|
C:HIS201
|
3.5
|
61.4
|
1.0
|
|
CE1
|
C:HIS201
|
3.5
|
61.4
|
1.0
|
|
CE1
|
C:HIS100
|
3.8
|
61.4
|
1.0
|
|
CG
|
C:HIS100
|
4.2
|
61.4
|
1.0
|
|
C2B
|
C:HEM404
|
4.2
|
61.4
|
1.0
|
|
C3B
|
C:HEM404
|
4.2
|
61.4
|
1.0
|
|
C3A
|
C:HEM404
|
4.3
|
61.4
|
1.0
|
|
C2D
|
C:HEM404
|
4.3
|
61.4
|
1.0
|
|
C2A
|
C:HEM404
|
4.3
|
61.4
|
1.0
|
|
C2C
|
C:HEM404
|
4.3
|
61.4
|
1.0
|
|
C3C
|
C:HEM404
|
4.3
|
61.4
|
1.0
|
|
C3D
|
C:HEM404
|
4.3
|
61.4
|
1.0
|
|
ND1
|
C:HIS201
|
4.6
|
61.4
|
1.0
|
|
CG
|
C:HIS201
|
4.6
|
61.4
|
1.0
|
|
ND1
|
C:HIS100
|
4.6
|
61.4
|
1.0
|
|
Iron binding site 3 out
of 10 in 8zno
Go back to
Iron Binding Sites List in 8zno
Iron binding site 3 out
of 10 in the Cryo-Em Structure of Arachis Hypogaea BC1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Cryo-Em Structure of Arachis Hypogaea BC1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe402
b:55.9
occ:1.00
|
FE
|
D:HEC402
|
0.0
|
55.9
|
1.0
|
|
NA
|
D:HEC402
|
2.0
|
55.9
|
1.0
|
|
ND
|
D:HEC402
|
2.1
|
55.9
|
1.0
|
|
NC
|
D:HEC402
|
2.1
|
55.9
|
1.0
|
|
NB
|
D:HEC402
|
2.1
|
55.9
|
1.0
|
|
NE2
|
D:HIS107
|
2.5
|
51.2
|
1.0
|
|
CE
|
D:MET226
|
2.9
|
58.2
|
1.0
|
|
SD
|
D:MET226
|
3.0
|
58.2
|
1.0
|
|
C1A
|
D:HEC402
|
3.0
|
55.9
|
1.0
|
|
C4D
|
D:HEC402
|
3.0
|
55.9
|
1.0
|
|
C4B
|
D:HEC402
|
3.1
|
55.9
|
1.0
|
|
C4C
|
D:HEC402
|
3.1
|
55.9
|
1.0
|
|
C1D
|
D:HEC402
|
3.1
|
55.9
|
1.0
|
|
C1C
|
D:HEC402
|
3.1
|
55.9
|
1.0
|
|
C1B
|
D:HEC402
|
3.1
|
55.9
|
1.0
|
|
C4A
|
D:HEC402
|
3.1
|
55.9
|
1.0
|
|
CHA
|
D:HEC402
|
3.4
|
55.9
|
1.0
|
|
CE1
|
D:HIS107
|
3.4
|
51.2
|
1.0
|
|
CHC
|
D:HEC402
|
3.4
|
55.9
|
1.0
|
|
CHD
|
D:HEC402
|
3.4
|
55.9
|
1.0
|
|
CHB
|
D:HEC402
|
3.5
|
55.9
|
1.0
|
|
CD2
|
D:HIS107
|
3.5
|
51.2
|
1.0
|
|
CB
|
D:MET226
|
4.2
|
58.2
|
1.0
|
|
CG
|
D:MET226
|
4.3
|
58.2
|
1.0
|
|
C2A
|
D:HEC402
|
4.3
|
55.9
|
1.0
|
|
C3D
|
D:HEC402
|
4.3
|
55.9
|
1.0
|
|
C3C
|
D:HEC402
|
4.3
|
55.9
|
1.0
|
|
C3B
|
D:HEC402
|
4.3
|
55.9
|
1.0
|
|
C2B
|
D:HEC402
|
4.3
|
55.9
|
1.0
|
|
C3A
|
D:HEC402
|
4.3
|
55.9
|
1.0
|
|
C2C
|
D:HEC402
|
4.3
|
55.9
|
1.0
|
|
C2D
|
D:HEC402
|
4.3
|
55.9
|
1.0
|
|
ND1
|
D:HIS107
|
4.6
|
51.2
|
1.0
|
|
CG
|
D:HIS107
|
4.7
|
51.2
|
1.0
|
|
SG
|
D:CYS106
|
4.9
|
54.5
|
1.0
|
|
Iron binding site 4 out
of 10 in 8zno
Go back to
Iron Binding Sites List in 8zno
Iron binding site 4 out
of 10 in the Cryo-Em Structure of Arachis Hypogaea BC1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Cryo-Em Structure of Arachis Hypogaea BC1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe301
b:144.9
occ:1.00
|
FE1
|
E:FES301
|
0.0
|
144.9
|
1.0
|
|
S1
|
E:FES301
|
2.2
|
144.9
|
1.0
|
|
S2
|
E:FES301
|
2.2
|
144.9
|
1.0
|
|
SG
|
E:CYS230
|
2.3
|
123.8
|
1.0
|
|
SG
|
E:CYS211
|
2.3
|
115.0
|
1.0
|
|
FE2
|
E:FES301
|
2.7
|
144.9
|
1.0
|
|
CB
|
E:CYS230
|
2.8
|
123.8
|
1.0
|
|
OG
|
E:SER235
|
3.0
|
126.8
|
1.0
|
|
CB
|
E:SER235
|
3.3
|
126.8
|
1.0
|
|
CB
|
E:CYS211
|
3.5
|
115.0
|
1.0
|
|
CB
|
E:HIS213
|
3.9
|
109.4
|
1.0
|
|
ND1
|
E:HIS213
|
4.0
|
109.4
|
1.0
|
|
CA
|
E:CYS230
|
4.2
|
123.8
|
1.0
|
|
OH
|
E:TYR237
|
4.4
|
123.9
|
1.0
|
|
CG
|
E:HIS213
|
4.4
|
109.4
|
1.0
|
|
O
|
E:CYS230
|
4.5
|
123.8
|
1.0
|
|
CA
|
E:SER235
|
4.6
|
126.8
|
1.0
|
|
N
|
E:LEU214
|
4.6
|
100.8
|
1.0
|
|
CE2
|
E:TYR237
|
4.6
|
123.9
|
1.0
|
|
C
|
E:CYS230
|
4.6
|
123.8
|
1.0
|
|
N
|
E:SER235
|
4.7
|
126.8
|
1.0
|
|
CB
|
E:CYS216
|
4.7
|
113.4
|
1.0
|
|
CB
|
E:CYS232
|
4.7
|
117.0
|
1.0
|
|
CA
|
E:HIS213
|
4.9
|
109.4
|
1.0
|
|
N
|
E:HIS213
|
4.9
|
109.4
|
1.0
|
|
CA
|
E:CYS211
|
4.9
|
115.0
|
1.0
|
|
SG
|
E:CYS216
|
4.9
|
113.4
|
1.0
|
|
N
|
E:HIS233
|
4.9
|
108.1
|
1.0
|
|
Iron binding site 5 out
of 10 in 8zno
Go back to
Iron Binding Sites List in 8zno
Iron binding site 5 out
of 10 in the Cryo-Em Structure of Arachis Hypogaea BC1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Cryo-Em Structure of Arachis Hypogaea BC1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe301
b:144.9
occ:1.00
|
FE2
|
E:FES301
|
0.0
|
144.9
|
1.0
|
|
S2
|
E:FES301
|
2.2
|
144.9
|
1.0
|
|
S1
|
E:FES301
|
2.2
|
144.9
|
1.0
|
|
FE1
|
E:FES301
|
2.7
|
144.9
|
1.0
|
|
CB
|
E:LEU214
|
3.0
|
100.8
|
1.0
|
|
ND1
|
E:HIS213
|
3.0
|
109.4
|
1.0
|
|
CB
|
E:CYS232
|
3.4
|
117.0
|
1.0
|
|
CG
|
E:LEU214
|
3.5
|
100.8
|
1.0
|
|
N
|
E:LEU214
|
3.6
|
100.8
|
1.0
|
|
CD1
|
E:LEU214
|
3.6
|
100.8
|
1.0
|
|
SG
|
E:CYS230
|
3.7
|
123.8
|
1.0
|
|
CA
|
E:LEU214
|
3.8
|
100.8
|
1.0
|
|
CG
|
E:HIS213
|
3.9
|
109.4
|
1.0
|
|
CE1
|
E:HIS213
|
3.9
|
109.4
|
1.0
|
|
SG
|
E:CYS216
|
3.9
|
113.4
|
1.0
|
|
N
|
E:HIS233
|
4.0
|
108.1
|
1.0
|
|
CB
|
E:HIS213
|
4.0
|
109.4
|
1.0
|
|
SG
|
E:CYS211
|
4.2
|
115.0
|
1.0
|
|
CB
|
E:HIS233
|
4.3
|
108.1
|
1.0
|
|
SG
|
E:CYS232
|
4.3
|
117.0
|
1.0
|
|
CA
|
E:CYS232
|
4.4
|
117.0
|
1.0
|
|
C
|
E:HIS213
|
4.4
|
109.4
|
1.0
|
|
C
|
E:CYS232
|
4.4
|
117.0
|
1.0
|
|
C
|
E:LEU214
|
4.4
|
100.8
|
1.0
|
|
OG
|
E:SER235
|
4.5
|
126.8
|
1.0
|
|
ND1
|
E:HIS233
|
4.5
|
108.1
|
1.0
|
|
CB
|
E:CYS216
|
4.7
|
113.4
|
1.0
|
|
CA
|
E:HIS233
|
4.7
|
108.1
|
1.0
|
|
CG
|
E:HIS233
|
4.7
|
108.1
|
1.0
|
|
CA
|
E:HIS213
|
4.8
|
109.4
|
1.0
|
|
N
|
E:CYS232
|
4.9
|
117.0
|
1.0
|
|
O
|
E:LEU214
|
4.9
|
100.8
|
1.0
|
|
CD2
|
E:LEU214
|
4.9
|
100.8
|
1.0
|
|
NE2
|
E:HIS213
|
4.9
|
109.4
|
1.0
|
|
N
|
E:GLY215
|
4.9
|
108.9
|
1.0
|
|
CD2
|
E:HIS213
|
5.0
|
109.4
|
1.0
|
|
CB
|
E:CYS230
|
5.0
|
123.8
|
1.0
|
|
Iron binding site 6 out
of 10 in 8zno
Go back to
Iron Binding Sites List in 8zno
Iron binding site 6 out
of 10 in the Cryo-Em Structure of Arachis Hypogaea BC1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Cryo-Em Structure of Arachis Hypogaea BC1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
O:Fe403
b:61.4
occ:1.00
|
FE
|
O:HEM403
|
0.0
|
61.4
|
1.0
|
|
NB
|
O:HEM403
|
2.0
|
61.4
|
1.0
|
|
ND
|
O:HEM403
|
2.0
|
61.4
|
1.0
|
|
NA
|
O:HEM403
|
2.0
|
61.4
|
1.0
|
|
NC
|
O:HEM403
|
2.1
|
61.4
|
1.0
|
|
NE2
|
O:HIS187
|
2.5
|
61.4
|
1.0
|
|
NE2
|
O:HIS86
|
2.5
|
61.4
|
1.0
|
|
C1B
|
O:HEM403
|
3.0
|
61.4
|
1.0
|
|
C4B
|
O:HEM403
|
3.0
|
61.4
|
1.0
|
|
C4D
|
O:HEM403
|
3.0
|
61.4
|
1.0
|
|
C1C
|
O:HEM403
|
3.1
|
61.4
|
1.0
|
|
C4A
|
O:HEM403
|
3.1
|
61.4
|
1.0
|
|
C1D
|
O:HEM403
|
3.1
|
61.4
|
1.0
|
|
C1A
|
O:HEM403
|
3.1
|
61.4
|
1.0
|
|
C4C
|
O:HEM403
|
3.1
|
61.4
|
1.0
|
|
CD2
|
O:HIS187
|
3.1
|
61.4
|
1.0
|
|
CD2
|
O:HIS86
|
3.3
|
61.4
|
1.0
|
|
CHB
|
O:HEM403
|
3.4
|
61.4
|
1.0
|
|
CHC
|
O:HEM403
|
3.4
|
61.4
|
1.0
|
|
CHA
|
O:HEM403
|
3.4
|
61.4
|
1.0
|
|
CHD
|
O:HEM403
|
3.4
|
61.4
|
1.0
|
|
CE1
|
O:HIS86
|
3.6
|
61.4
|
1.0
|
|
CE1
|
O:HIS187
|
3.6
|
61.4
|
1.0
|
|
C2B
|
O:HEM403
|
4.2
|
61.4
|
1.0
|
|
C3B
|
O:HEM403
|
4.3
|
61.4
|
1.0
|
|
C3D
|
O:HEM403
|
4.3
|
61.4
|
1.0
|
|
C2D
|
O:HEM403
|
4.3
|
61.4
|
1.0
|
|
C3A
|
O:HEM403
|
4.3
|
61.4
|
1.0
|
|
C2C
|
O:HEM403
|
4.3
|
61.4
|
1.0
|
|
C2A
|
O:HEM403
|
4.3
|
61.4
|
1.0
|
|
C3C
|
O:HEM403
|
4.3
|
61.4
|
1.0
|
|
CG
|
O:HIS187
|
4.4
|
61.4
|
1.0
|
|
CG
|
O:HIS86
|
4.5
|
61.4
|
1.0
|
|
ND1
|
O:HIS187
|
4.6
|
61.4
|
1.0
|
|
ND1
|
O:HIS86
|
4.6
|
61.4
|
1.0
|
|
Iron binding site 7 out
of 10 in 8zno
Go back to
Iron Binding Sites List in 8zno
Iron binding site 7 out
of 10 in the Cryo-Em Structure of Arachis Hypogaea BC1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Cryo-Em Structure of Arachis Hypogaea BC1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
O:Fe404
b:61.4
occ:1.00
|
FE
|
O:HEM404
|
0.0
|
61.4
|
1.0
|
|
NB
|
O:HEM404
|
2.0
|
61.4
|
1.0
|
|
NA
|
O:HEM404
|
2.0
|
61.4
|
1.0
|
|
NC
|
O:HEM404
|
2.0
|
61.4
|
1.0
|
|
ND
|
O:HEM404
|
2.1
|
61.4
|
1.0
|
|
NE2
|
O:HIS100
|
2.5
|
61.4
|
1.0
|
|
NE2
|
O:HIS201
|
2.5
|
61.4
|
1.0
|
|
CD2
|
O:HIS100
|
3.0
|
61.4
|
1.0
|
|
C1B
|
O:HEM404
|
3.0
|
61.4
|
1.0
|
|
C4A
|
O:HEM404
|
3.0
|
61.4
|
1.0
|
|
C4B
|
O:HEM404
|
3.0
|
61.4
|
1.0
|
|
C1C
|
O:HEM404
|
3.1
|
61.4
|
1.0
|
|
C1D
|
O:HEM404
|
3.1
|
61.4
|
1.0
|
|
C4C
|
O:HEM404
|
3.1
|
61.4
|
1.0
|
|
C1A
|
O:HEM404
|
3.1
|
61.4
|
1.0
|
|
C4D
|
O:HEM404
|
3.1
|
61.4
|
1.0
|
|
CHB
|
O:HEM404
|
3.4
|
61.4
|
1.0
|
|
CE1
|
O:HIS201
|
3.4
|
61.4
|
1.0
|
|
CHC
|
O:HEM404
|
3.4
|
61.4
|
1.0
|
|
CHD
|
O:HEM404
|
3.4
|
61.4
|
1.0
|
|
CHA
|
O:HEM404
|
3.5
|
61.4
|
1.0
|
|
CD2
|
O:HIS201
|
3.5
|
61.4
|
1.0
|
|
CE1
|
O:HIS100
|
3.8
|
61.4
|
1.0
|
|
C2B
|
O:HEM404
|
4.2
|
61.4
|
1.0
|
|
C3B
|
O:HEM404
|
4.3
|
61.4
|
1.0
|
|
C3A
|
O:HEM404
|
4.3
|
61.4
|
1.0
|
|
C2A
|
O:HEM404
|
4.3
|
61.4
|
1.0
|
|
C2C
|
O:HEM404
|
4.3
|
61.4
|
1.0
|
|
CG
|
O:HIS100
|
4.3
|
61.4
|
1.0
|
|
C3C
|
O:HEM404
|
4.3
|
61.4
|
1.0
|
|
C2D
|
O:HEM404
|
4.3
|
61.4
|
1.0
|
|
C3D
|
O:HEM404
|
4.3
|
61.4
|
1.0
|
|
ND1
|
O:HIS201
|
4.5
|
61.4
|
1.0
|
|
CG
|
O:HIS201
|
4.6
|
61.4
|
1.0
|
|
ND1
|
O:HIS100
|
4.6
|
61.4
|
1.0
|
|
Iron binding site 8 out
of 10 in 8zno
Go back to
Iron Binding Sites List in 8zno
Iron binding site 8 out
of 10 in the Cryo-Em Structure of Arachis Hypogaea BC1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Cryo-Em Structure of Arachis Hypogaea BC1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe403
b:53.7
occ:1.00
|
FE
|
P:HEC403
|
0.0
|
53.7
|
1.0
|
|
NA
|
P:HEC403
|
2.0
|
53.7
|
1.0
|
|
NC
|
P:HEC403
|
2.0
|
53.7
|
1.0
|
|
ND
|
P:HEC403
|
2.1
|
53.7
|
1.0
|
|
NB
|
P:HEC403
|
2.1
|
53.7
|
1.0
|
|
NE2
|
P:HIS107
|
2.6
|
47.8
|
1.0
|
|
CE
|
P:MET226
|
3.0
|
54.9
|
1.0
|
|
C1A
|
P:HEC403
|
3.0
|
53.7
|
1.0
|
|
C4D
|
P:HEC403
|
3.1
|
53.7
|
1.0
|
|
C4C
|
P:HEC403
|
3.1
|
53.7
|
1.0
|
|
C1C
|
P:HEC403
|
3.1
|
53.7
|
1.0
|
|
C4B
|
P:HEC403
|
3.1
|
53.7
|
1.0
|
|
SD
|
P:MET226
|
3.1
|
54.9
|
1.0
|
|
C1B
|
P:HEC403
|
3.1
|
53.7
|
1.0
|
|
C1D
|
P:HEC403
|
3.1
|
53.7
|
1.0
|
|
C4A
|
P:HEC403
|
3.1
|
53.7
|
1.0
|
|
CE1
|
P:HIS107
|
3.3
|
47.8
|
1.0
|
|
CHA
|
P:HEC403
|
3.4
|
53.7
|
1.0
|
|
CHC
|
P:HEC403
|
3.4
|
53.7
|
1.0
|
|
CHD
|
P:HEC403
|
3.4
|
53.7
|
1.0
|
|
CHB
|
P:HEC403
|
3.5
|
53.7
|
1.0
|
|
CD2
|
P:HIS107
|
3.6
|
47.8
|
1.0
|
|
CB
|
P:MET226
|
4.2
|
54.9
|
1.0
|
|
C2A
|
P:HEC403
|
4.3
|
53.7
|
1.0
|
|
C2C
|
P:HEC403
|
4.3
|
53.7
|
1.0
|
|
C3C
|
P:HEC403
|
4.3
|
53.7
|
1.0
|
|
C2B
|
P:HEC403
|
4.3
|
53.7
|
1.0
|
|
C3D
|
P:HEC403
|
4.3
|
53.7
|
1.0
|
|
C3B
|
P:HEC403
|
4.3
|
53.7
|
1.0
|
|
C3A
|
P:HEC403
|
4.3
|
53.7
|
1.0
|
|
CG
|
P:MET226
|
4.3
|
54.9
|
1.0
|
|
C2D
|
P:HEC403
|
4.3
|
53.7
|
1.0
|
|
ND1
|
P:HIS107
|
4.5
|
47.8
|
1.0
|
|
CG
|
P:HIS107
|
4.7
|
47.8
|
1.0
|
|
Iron binding site 9 out
of 10 in 8zno
Go back to
Iron Binding Sites List in 8zno
Iron binding site 9 out
of 10 in the Cryo-Em Structure of Arachis Hypogaea BC1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Cryo-Em Structure of Arachis Hypogaea BC1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
Q:Fe301
b:150.0
occ:1.00
|
FE1
|
Q:FES301
|
0.0
|
150.0
|
1.0
|
|
CB
|
Q:CYS230
|
2.1
|
132.0
|
1.0
|
|
S1
|
Q:FES301
|
2.2
|
150.0
|
1.0
|
|
S2
|
Q:FES301
|
2.2
|
150.0
|
1.0
|
|
SG
|
Q:CYS230
|
2.3
|
132.0
|
1.0
|
|
SG
|
Q:CYS211
|
2.3
|
120.5
|
1.0
|
|
FE2
|
Q:FES301
|
2.7
|
150.0
|
1.0
|
|
CA
|
Q:CYS230
|
3.6
|
132.0
|
1.0
|
|
OG
|
Q:SER235
|
3.7
|
128.3
|
1.0
|
|
ND1
|
Q:HIS213
|
3.7
|
114.7
|
1.0
|
|
CB
|
Q:SER235
|
3.8
|
128.3
|
1.0
|
|
CB
|
Q:CYS211
|
3.8
|
120.5
|
1.0
|
|
CG
|
Q:PRO218
|
3.8
|
122.7
|
1.0
|
|
CB
|
Q:HIS213
|
4.1
|
114.7
|
1.0
|
|
O
|
Q:CYS230
|
4.1
|
132.0
|
1.0
|
|
N
|
Q:CYS230
|
4.2
|
132.0
|
1.0
|
|
C
|
Q:CYS230
|
4.3
|
132.0
|
1.0
|
|
CG
|
Q:HIS213
|
4.3
|
114.7
|
1.0
|
|
CB
|
Q:PRO218
|
4.4
|
122.7
|
1.0
|
|
CE1
|
Q:TYR237
|
4.5
|
122.0
|
1.0
|
|
N
|
Q:LEU214
|
4.7
|
100.9
|
1.0
|
|
CD
|
Q:PRO218
|
4.8
|
122.7
|
1.0
|
|
CE1
|
Q:HIS213
|
4.8
|
114.7
|
1.0
|
|
N
|
Q:SER235
|
4.8
|
128.3
|
1.0
|
|
O
|
Q:SER235
|
4.9
|
128.3
|
1.0
|
|
CA
|
Q:SER235
|
4.9
|
128.3
|
1.0
|
|
CB
|
Q:CYS216
|
5.0
|
116.8
|
1.0
|
|
Iron binding site 10 out
of 10 in 8zno
Go back to
Iron Binding Sites List in 8zno
Iron binding site 10 out
of 10 in the Cryo-Em Structure of Arachis Hypogaea BC1 Complex
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Cryo-Em Structure of Arachis Hypogaea BC1 Complex within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
Q:Fe301
b:150.0
occ:1.00
|
FE2
|
Q:FES301
|
0.0
|
150.0
|
1.0
|
|
S1
|
Q:FES301
|
2.2
|
150.0
|
1.0
|
|
S2
|
Q:FES301
|
2.2
|
150.0
|
1.0
|
|
SG
|
Q:CYS230
|
2.6
|
132.0
|
1.0
|
|
FE1
|
Q:FES301
|
2.7
|
150.0
|
1.0
|
|
CB
|
Q:LEU214
|
3.1
|
100.9
|
1.0
|
|
ND1
|
Q:HIS213
|
3.2
|
114.7
|
1.0
|
|
CB
|
Q:CYS232
|
3.3
|
121.3
|
1.0
|
|
CB
|
Q:CYS230
|
3.8
|
132.0
|
1.0
|
|
CE1
|
Q:HIS213
|
3.8
|
114.7
|
1.0
|
|
N
|
Q:LEU214
|
3.9
|
100.9
|
1.0
|
|
CG
|
Q:LEU214
|
3.9
|
100.9
|
1.0
|
|
N
|
Q:HIS233
|
3.9
|
108.4
|
1.0
|
|
SG
|
Q:CYS211
|
4.0
|
120.5
|
1.0
|
|
SG
|
Q:CYS216
|
4.0
|
116.8
|
1.0
|
|
CA
|
Q:LEU214
|
4.0
|
100.9
|
1.0
|
|
SG
|
Q:CYS232
|
4.1
|
121.3
|
1.0
|
|
CD1
|
Q:LEU214
|
4.1
|
100.9
|
1.0
|
|
CG
|
Q:HIS213
|
4.2
|
114.7
|
1.0
|
|
CA
|
Q:CYS232
|
4.3
|
121.3
|
1.0
|
|
CB
|
Q:CYS216
|
4.3
|
116.8
|
1.0
|
|
C
|
Q:CYS232
|
4.4
|
121.3
|
1.0
|
|
N
|
Q:CYS232
|
4.5
|
121.3
|
1.0
|
|
O
|
Q:CYS230
|
4.5
|
132.0
|
1.0
|
|
CB
|
Q:HIS213
|
4.5
|
114.7
|
1.0
|
|
CB
|
Q:HIS233
|
4.5
|
108.4
|
1.0
|
|
OG
|
Q:SER235
|
4.5
|
128.3
|
1.0
|
|
C
|
Q:LEU214
|
4.5
|
100.9
|
1.0
|
|
C
|
Q:HIS213
|
4.8
|
114.7
|
1.0
|
|
CA
|
Q:HIS233
|
4.8
|
108.4
|
1.0
|
|
CB
|
Q:CYS211
|
4.8
|
120.5
|
1.0
|
|
N
|
Q:CYS216
|
4.9
|
116.8
|
1.0
|
|
O
|
Q:LEU214
|
4.9
|
100.9
|
1.0
|
|
C
|
Q:CYS230
|
4.9
|
132.0
|
1.0
|
|
CA
|
Q:CYS230
|
5.0
|
132.0
|
1.0
|
|
NE2
|
Q:HIS213
|
5.0
|
114.7
|
1.0
|
|
Reference:
Y.Ye,
J.Q.Dong,
G.F.Yang.
Cryo-Em Structure of Arachis Hypogaea BC1 Complex To Be Published.
Page generated: Fri Aug 8 01:57:56 2025
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