Iron in PDB 9cg3: Human Kidney Respiratory Complex III
Enzymatic activity of Human Kidney Respiratory Complex III
All present enzymatic activity of Human Kidney Respiratory Complex III:
7.1.1.8;
Iron Binding Sites:
The binding sites of Iron atom in the Human Kidney Respiratory Complex III
(pdb code 9cg3). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 10 binding sites of Iron where determined in the
Human Kidney Respiratory Complex III, PDB code: 9cg3:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 10 in 9cg3
Go back to
Iron Binding Sites List in 9cg3
Iron binding site 1 out
of 10 in the Human Kidney Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Human Kidney Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe301
b:20.0
occ:1.00
|
FE1
|
C:FES301
|
0.0
|
20.0
|
1.0
|
|
ND1
|
C:HIS239
|
1.8
|
36.4
|
1.0
|
|
ND1
|
C:HIS219
|
1.9
|
26.5
|
1.0
|
|
S2
|
C:FES301
|
2.2
|
20.0
|
1.0
|
|
S1
|
C:FES301
|
2.2
|
20.0
|
1.0
|
|
CE1
|
C:HIS239
|
2.7
|
38.3
|
1.0
|
|
CG
|
C:HIS239
|
2.7
|
40.2
|
1.0
|
|
O
|
C:HIS219
|
2.9
|
44.2
|
1.0
|
|
CE1
|
C:HIS219
|
2.9
|
23.8
|
1.0
|
|
CG
|
C:HIS219
|
2.9
|
19.9
|
1.0
|
|
FE2
|
C:FES301
|
3.1
|
20.0
|
1.0
|
|
CB
|
C:HIS239
|
3.2
|
45.2
|
1.0
|
|
CB
|
C:HIS219
|
3.3
|
21.9
|
1.0
|
|
C
|
C:HIS219
|
3.5
|
36.3
|
1.0
|
|
NE2
|
C:HIS239
|
3.7
|
39.4
|
1.0
|
|
CD2
|
C:HIS239
|
3.7
|
40.9
|
1.0
|
|
NE2
|
C:HIS219
|
4.0
|
22.6
|
1.0
|
|
SG
|
C:CYS236
|
4.0
|
35.0
|
1.0
|
|
CD2
|
C:HIS219
|
4.0
|
25.1
|
1.0
|
|
CA
|
C:HIS219
|
4.0
|
33.1
|
1.0
|
|
CB
|
C:LEU220
|
4.0
|
24.4
|
1.0
|
|
N
|
C:HIS239
|
4.1
|
48.0
|
1.0
|
|
CG
|
C:LEU220
|
4.1
|
22.4
|
1.0
|
|
SG
|
C:CYS217
|
4.3
|
30.0
|
1.0
|
|
CA
|
C:HIS239
|
4.3
|
48.1
|
1.0
|
|
CB
|
C:CYS238
|
4.3
|
30.0
|
1.0
|
|
CG
|
C:PRO253
|
4.3
|
60.5
|
1.0
|
|
N
|
C:LEU220
|
4.4
|
33.1
|
1.0
|
|
OG
|
C:SER241
|
4.5
|
32.5
|
1.0
|
|
CA
|
C:LEU220
|
4.7
|
29.4
|
1.0
|
|
SG
|
C:CYS222
|
4.8
|
30.0
|
1.0
|
|
CD1
|
C:LEU220
|
4.8
|
28.5
|
1.0
|
|
C
|
C:CYS238
|
4.8
|
50.1
|
1.0
|
|
N
|
C:HIS219
|
4.9
|
33.5
|
1.0
|
|
Iron binding site 2 out
of 10 in 9cg3
Go back to
Iron Binding Sites List in 9cg3
Iron binding site 2 out
of 10 in the Human Kidney Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Human Kidney Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe301
b:20.0
occ:1.00
|
FE2
|
C:FES301
|
0.0
|
20.0
|
1.0
|
|
SG
|
C:CYS236
|
1.2
|
35.0
|
1.0
|
|
SG
|
C:CYS217
|
1.5
|
30.0
|
1.0
|
|
S2
|
C:FES301
|
2.2
|
20.0
|
1.0
|
|
S1
|
C:FES301
|
2.2
|
20.0
|
1.0
|
|
CB
|
C:CYS236
|
2.6
|
39.5
|
1.0
|
|
CB
|
C:CYS217
|
3.1
|
30.0
|
1.0
|
|
FE1
|
C:FES301
|
3.1
|
20.0
|
1.0
|
|
O
|
C:HIS219
|
3.2
|
44.2
|
1.0
|
|
OG
|
C:SER241
|
3.8
|
32.5
|
1.0
|
|
CA
|
C:CYS236
|
3.9
|
37.1
|
1.0
|
|
CB
|
C:CYS222
|
4.0
|
30.0
|
1.0
|
|
CB
|
C:HIS219
|
4.1
|
21.9
|
1.0
|
|
CB
|
C:SER241
|
4.2
|
42.7
|
1.0
|
|
C
|
C:HIS219
|
4.2
|
36.3
|
1.0
|
|
ND1
|
C:HIS239
|
4.3
|
36.4
|
1.0
|
|
SG
|
C:CYS222
|
4.3
|
30.0
|
1.0
|
|
CA
|
C:CYS217
|
4.3
|
29.8
|
1.0
|
|
N
|
C:HIS219
|
4.4
|
33.5
|
1.0
|
|
C
|
C:CYS236
|
4.4
|
35.8
|
1.0
|
|
CA
|
C:HIS219
|
4.4
|
33.1
|
1.0
|
|
ND1
|
C:HIS219
|
4.5
|
26.5
|
1.0
|
|
O
|
C:CYS236
|
4.5
|
26.5
|
1.0
|
|
C
|
C:CYS217
|
4.6
|
33.0
|
1.0
|
|
OH
|
C:TYR243
|
4.6
|
28.7
|
1.0
|
|
CB
|
C:CYS238
|
4.6
|
30.0
|
1.0
|
|
N
|
C:HIS239
|
4.7
|
48.0
|
1.0
|
|
CG
|
C:HIS219
|
4.8
|
19.9
|
1.0
|
|
N
|
C:CYS222
|
4.8
|
38.1
|
1.0
|
|
N
|
C:SER241
|
4.9
|
44.3
|
1.0
|
|
O
|
C:CYS217
|
4.9
|
34.3
|
1.0
|
|
CA
|
C:CYS222
|
5.0
|
40.2
|
1.0
|
|
N
|
C:CYS236
|
5.0
|
36.6
|
1.0
|
|
Iron binding site 3 out
of 10 in 9cg3
Go back to
Iron Binding Sites List in 9cg3
Iron binding site 3 out
of 10 in the Human Kidney Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Human Kidney Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Fe401
b:20.0
occ:1.00
|
FE
|
H:HEC401
|
0.0
|
20.0
|
1.0
|
|
NE2
|
H:HIS125
|
2.0
|
20.0
|
1.0
|
|
NC
|
H:HEC401
|
2.1
|
20.0
|
1.0
|
|
ND
|
H:HEC401
|
2.1
|
20.0
|
1.0
|
|
NB
|
H:HEC401
|
2.1
|
20.0
|
1.0
|
|
NA
|
H:HEC401
|
2.1
|
20.0
|
1.0
|
|
SD
|
H:MET244
|
2.5
|
23.4
|
1.0
|
|
CD2
|
H:HIS125
|
2.9
|
20.0
|
1.0
|
|
CE1
|
H:HIS125
|
3.0
|
20.0
|
1.0
|
|
C4B
|
H:HEC401
|
3.1
|
20.0
|
1.0
|
|
C1C
|
H:HEC401
|
3.1
|
20.0
|
1.0
|
|
C1D
|
H:HEC401
|
3.1
|
20.0
|
1.0
|
|
C4C
|
H:HEC401
|
3.1
|
20.0
|
1.0
|
|
C4D
|
H:HEC401
|
3.1
|
20.0
|
1.0
|
|
C4A
|
H:HEC401
|
3.1
|
20.0
|
1.0
|
|
C1A
|
H:HEC401
|
3.1
|
20.0
|
1.0
|
|
C1B
|
H:HEC401
|
3.1
|
20.0
|
1.0
|
|
CHC
|
H:HEC401
|
3.4
|
20.0
|
1.0
|
|
CHD
|
H:HEC401
|
3.4
|
20.0
|
1.0
|
|
CHB
|
H:HEC401
|
3.4
|
20.0
|
1.0
|
|
CHA
|
H:HEC401
|
3.4
|
20.0
|
1.0
|
|
CG
|
H:MET244
|
3.8
|
35.9
|
1.0
|
|
CE
|
H:MET244
|
3.9
|
36.2
|
1.0
|
|
CG
|
H:HIS125
|
4.1
|
20.0
|
1.0
|
|
ND1
|
H:HIS125
|
4.1
|
20.0
|
1.0
|
|
CB
|
H:MET244
|
4.3
|
38.1
|
1.0
|
|
C3B
|
H:HEC401
|
4.4
|
20.0
|
1.0
|
|
C3C
|
H:HEC401
|
4.4
|
20.0
|
1.0
|
|
C2D
|
H:HEC401
|
4.4
|
20.0
|
1.0
|
|
C3D
|
H:HEC401
|
4.4
|
20.0
|
1.0
|
|
C3A
|
H:HEC401
|
4.4
|
20.0
|
1.0
|
|
C2A
|
H:HEC401
|
4.4
|
20.0
|
1.0
|
|
C2C
|
H:HEC401
|
4.4
|
20.0
|
1.0
|
|
C2B
|
H:HEC401
|
4.4
|
20.0
|
1.0
|
|
Iron binding site 4 out
of 10 in 9cg3
Go back to
Iron Binding Sites List in 9cg3
Iron binding site 4 out
of 10 in the Human Kidney Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Human Kidney Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:Fe401
b:3.5
occ:1.00
|
FE
|
J:HEM401
|
0.0
|
3.5
|
1.0
|
|
NE2
|
J:HIS83
|
1.8
|
22.2
|
1.0
|
|
NC
|
J:HEM401
|
2.0
|
6.7
|
1.0
|
|
ND
|
J:HEM401
|
2.0
|
5.9
|
1.0
|
|
NB
|
J:HEM401
|
2.1
|
3.5
|
1.0
|
|
NA
|
J:HEM401
|
2.1
|
4.2
|
1.0
|
|
NE2
|
J:HIS182
|
2.5
|
7.0
|
1.0
|
|
CE1
|
J:HIS83
|
2.6
|
30.3
|
1.0
|
|
CD2
|
J:HIS83
|
3.0
|
26.9
|
1.0
|
|
C1C
|
J:HEM401
|
3.0
|
2.2
|
1.0
|
|
C4D
|
J:HEM401
|
3.1
|
6.3
|
1.0
|
|
C4C
|
J:HEM401
|
3.1
|
6.2
|
1.0
|
|
C4B
|
J:HEM401
|
3.1
|
2.4
|
1.0
|
|
C1D
|
J:HEM401
|
3.1
|
5.0
|
1.0
|
|
C1A
|
J:HEM401
|
3.1
|
11.5
|
1.0
|
|
C4A
|
J:HEM401
|
3.1
|
4.8
|
1.0
|
|
C1B
|
J:HEM401
|
3.1
|
5.3
|
1.0
|
|
CD2
|
J:HIS182
|
3.4
|
5.4
|
1.0
|
|
CHC
|
J:HEM401
|
3.4
|
2.2
|
1.0
|
|
CHA
|
J:HEM401
|
3.4
|
10.7
|
1.0
|
|
CHD
|
J:HEM401
|
3.4
|
4.4
|
1.0
|
|
CHB
|
J:HEM401
|
3.5
|
3.2
|
1.0
|
|
CE1
|
J:HIS182
|
3.5
|
2.2
|
1.0
|
|
ND1
|
J:HIS83
|
3.8
|
28.5
|
1.0
|
|
CG
|
J:HIS83
|
4.0
|
24.3
|
1.0
|
|
C3D
|
J:HEM401
|
4.3
|
8.5
|
1.0
|
|
C2C
|
J:HEM401
|
4.3
|
2.2
|
1.0
|
|
C2D
|
J:HEM401
|
4.3
|
2.2
|
1.0
|
|
C3C
|
J:HEM401
|
4.3
|
3.5
|
1.0
|
|
C3A
|
J:HEM401
|
4.3
|
6.0
|
1.0
|
|
C2A
|
J:HEM401
|
4.3
|
7.4
|
1.0
|
|
C3B
|
J:HEM401
|
4.3
|
5.6
|
1.0
|
|
C2B
|
J:HEM401
|
4.3
|
2.2
|
1.0
|
|
CG
|
J:HIS182
|
4.5
|
2.2
|
1.0
|
|
ND1
|
J:HIS182
|
4.5
|
7.6
|
1.0
|
|
NE2
|
J:GLN44
|
4.6
|
28.4
|
1.0
|
|
CA
|
J:GLY48
|
4.9
|
6.4
|
1.0
|
|
Iron binding site 5 out
of 10 in 9cg3
Go back to
Iron Binding Sites List in 9cg3
Iron binding site 5 out
of 10 in the Human Kidney Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Human Kidney Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:Fe402
b:2.6
occ:1.00
|
FE
|
J:HEM402
|
0.0
|
2.6
|
1.0
|
|
NC
|
J:HEM402
|
2.0
|
2.2
|
1.0
|
|
NB
|
J:HEM402
|
2.0
|
6.7
|
1.0
|
|
ND
|
J:HEM402
|
2.0
|
2.2
|
1.0
|
|
NA
|
J:HEM402
|
2.0
|
4.5
|
1.0
|
|
NE2
|
J:HIS196
|
2.1
|
2.2
|
1.0
|
|
NE2
|
J:HIS97
|
2.7
|
8.9
|
1.0
|
|
CD2
|
J:HIS196
|
2.8
|
6.5
|
1.0
|
|
C4A
|
J:HEM402
|
3.0
|
2.2
|
1.0
|
|
C1B
|
J:HEM402
|
3.0
|
4.8
|
1.0
|
|
C1C
|
J:HEM402
|
3.0
|
6.2
|
1.0
|
|
C1D
|
J:HEM402
|
3.0
|
5.9
|
1.0
|
|
C4C
|
J:HEM402
|
3.1
|
6.0
|
1.0
|
|
C4B
|
J:HEM402
|
3.1
|
5.5
|
1.0
|
|
C4D
|
J:HEM402
|
3.1
|
6.0
|
1.0
|
|
C1A
|
J:HEM402
|
3.1
|
6.7
|
1.0
|
|
CE1
|
J:HIS196
|
3.2
|
7.3
|
1.0
|
|
CD2
|
J:HIS97
|
3.3
|
5.7
|
1.0
|
|
CHB
|
J:HEM402
|
3.4
|
2.2
|
1.0
|
|
CHD
|
J:HEM402
|
3.4
|
5.8
|
1.0
|
|
CHC
|
J:HEM402
|
3.4
|
5.7
|
1.0
|
|
CHA
|
J:HEM402
|
3.4
|
7.2
|
1.0
|
|
CE1
|
J:HIS97
|
3.9
|
4.0
|
1.0
|
|
CG
|
J:HIS196
|
3.9
|
6.7
|
1.0
|
|
ND1
|
J:HIS196
|
4.1
|
6.3
|
1.0
|
|
C3A
|
J:HEM402
|
4.3
|
5.7
|
1.0
|
|
C2C
|
J:HEM402
|
4.3
|
2.2
|
1.0
|
|
C2D
|
J:HEM402
|
4.3
|
2.2
|
1.0
|
|
C3C
|
J:HEM402
|
4.3
|
2.2
|
1.0
|
|
C2B
|
J:HEM402
|
4.3
|
2.2
|
1.0
|
|
C3B
|
J:HEM402
|
4.3
|
5.9
|
1.0
|
|
C3D
|
J:HEM402
|
4.3
|
6.3
|
1.0
|
|
C2A
|
J:HEM402
|
4.3
|
6.3
|
1.0
|
|
CG
|
J:HIS97
|
4.5
|
2.2
|
1.0
|
|
ND1
|
J:HIS97
|
4.8
|
4.4
|
1.0
|
|
Iron binding site 6 out
of 10 in 9cg3
Go back to
Iron Binding Sites List in 9cg3
Iron binding site 6 out
of 10 in the Human Kidney Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Human Kidney Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe301
b:20.0
occ:1.00
|
FE1
|
P:FES301
|
0.0
|
20.0
|
1.0
|
|
ND1
|
P:HIS219
|
1.8
|
26.5
|
1.0
|
|
S1
|
P:FES301
|
2.2
|
20.0
|
1.0
|
|
S2
|
P:FES301
|
2.2
|
20.0
|
1.0
|
|
CG
|
P:HIS219
|
2.6
|
19.9
|
1.0
|
|
CB
|
P:HIS219
|
2.8
|
21.9
|
1.0
|
|
CE1
|
P:HIS219
|
2.9
|
23.8
|
1.0
|
|
FE2
|
P:FES301
|
3.1
|
20.0
|
1.0
|
|
N
|
P:LEU220
|
3.2
|
33.1
|
1.0
|
|
ND1
|
P:HIS239
|
3.4
|
36.4
|
1.0
|
|
CB
|
P:LEU220
|
3.5
|
24.4
|
1.0
|
|
CG
|
P:HIS239
|
3.5
|
40.2
|
1.0
|
|
CG
|
P:LEU220
|
3.6
|
22.4
|
1.0
|
|
CB
|
P:HIS239
|
3.6
|
45.2
|
1.0
|
|
CD2
|
P:HIS219
|
3.8
|
25.1
|
1.0
|
|
C
|
P:HIS219
|
3.9
|
36.3
|
1.0
|
|
CA
|
P:HIS219
|
3.9
|
33.1
|
1.0
|
|
NE2
|
P:HIS219
|
3.9
|
22.6
|
1.0
|
|
CA
|
P:LEU220
|
3.9
|
29.4
|
1.0
|
|
SG
|
P:CYS217
|
4.1
|
30.0
|
1.0
|
|
CD1
|
P:LEU220
|
4.1
|
28.5
|
1.0
|
|
SG
|
P:CYS236
|
4.1
|
35.0
|
1.0
|
|
CE1
|
P:HIS239
|
4.1
|
38.3
|
1.0
|
|
CD2
|
P:HIS239
|
4.3
|
40.9
|
1.0
|
|
OG
|
P:SER241
|
4.4
|
32.5
|
1.0
|
|
N
|
P:HIS239
|
4.5
|
48.0
|
1.0
|
|
CB
|
P:CYS238
|
4.6
|
30.0
|
1.0
|
|
NE2
|
P:HIS239
|
4.6
|
39.4
|
1.0
|
|
CG
|
P:PRO253
|
4.6
|
60.5
|
1.0
|
|
CA
|
P:HIS239
|
4.7
|
48.1
|
1.0
|
|
C
|
P:LEU220
|
4.7
|
29.7
|
1.0
|
|
N
|
P:HIS219
|
4.8
|
33.5
|
1.0
|
|
O
|
P:LEU220
|
4.9
|
32.8
|
1.0
|
|
O
|
P:HIS219
|
4.9
|
44.2
|
1.0
|
|
CD2
|
P:LEU220
|
4.9
|
20.7
|
1.0
|
|
Iron binding site 7 out
of 10 in 9cg3
Go back to
Iron Binding Sites List in 9cg3
Iron binding site 7 out
of 10 in the Human Kidney Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Human Kidney Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
P:Fe301
b:20.0
occ:1.00
|
FE2
|
P:FES301
|
0.0
|
20.0
|
1.0
|
|
SG
|
P:CYS236
|
1.8
|
35.0
|
1.0
|
|
SG
|
P:CYS217
|
1.9
|
30.0
|
1.0
|
|
S2
|
P:FES301
|
2.2
|
20.0
|
1.0
|
|
S1
|
P:FES301
|
2.2
|
20.0
|
1.0
|
|
CB
|
P:CYS236
|
2.7
|
39.5
|
1.0
|
|
CB
|
P:CYS217
|
2.8
|
30.0
|
1.0
|
|
FE1
|
P:FES301
|
3.1
|
20.0
|
1.0
|
|
OG
|
P:SER241
|
3.7
|
32.5
|
1.0
|
|
CB
|
P:HIS219
|
3.9
|
21.9
|
1.0
|
|
CB
|
P:SER241
|
4.0
|
42.7
|
1.0
|
|
CA
|
P:CYS236
|
4.1
|
37.1
|
1.0
|
|
CB
|
P:CYS222
|
4.1
|
30.0
|
1.0
|
|
CA
|
P:CYS217
|
4.2
|
29.8
|
1.0
|
|
OH
|
P:TYR243
|
4.3
|
28.7
|
1.0
|
|
N
|
P:LEU220
|
4.4
|
33.1
|
1.0
|
|
SG
|
P:CYS222
|
4.6
|
30.0
|
1.0
|
|
ND1
|
P:HIS219
|
4.6
|
26.5
|
1.0
|
|
CB
|
P:CYS238
|
4.6
|
30.0
|
1.0
|
|
N
|
P:HIS219
|
4.7
|
33.5
|
1.0
|
|
C
|
P:CYS217
|
4.7
|
33.0
|
1.0
|
|
CG
|
P:HIS219
|
4.8
|
19.9
|
1.0
|
|
N
|
P:HIS239
|
4.8
|
48.0
|
1.0
|
|
CA
|
P:HIS219
|
4.8
|
33.1
|
1.0
|
|
C
|
P:CYS236
|
4.8
|
35.8
|
1.0
|
|
N
|
P:CYS222
|
4.9
|
38.1
|
1.0
|
|
N
|
P:SER241
|
4.9
|
44.3
|
1.0
|
|
CE1
|
P:TYR243
|
5.0
|
37.5
|
1.0
|
|
Iron binding site 8 out
of 10 in 9cg3
Go back to
Iron Binding Sites List in 9cg3
Iron binding site 8 out
of 10 in the Human Kidney Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Human Kidney Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
U:Fe401
b:37.1
occ:1.00
|
FE
|
U:HEC401
|
0.0
|
37.1
|
1.0
|
|
NE2
|
U:HIS125
|
1.8
|
20.0
|
1.0
|
|
NC
|
U:HEC401
|
2.0
|
37.2
|
1.0
|
|
ND
|
U:HEC401
|
2.0
|
43.2
|
1.0
|
|
NA
|
U:HEC401
|
2.1
|
40.5
|
1.0
|
|
NB
|
U:HEC401
|
2.1
|
34.0
|
1.0
|
|
CE1
|
U:HIS125
|
2.6
|
20.0
|
1.0
|
|
CD2
|
U:HIS125
|
2.9
|
20.0
|
1.0
|
|
SD
|
U:MET244
|
3.0
|
23.4
|
1.0
|
|
C1B
|
U:HEC401
|
3.0
|
33.9
|
1.0
|
|
C4A
|
U:HEC401
|
3.0
|
40.6
|
1.0
|
|
C1D
|
U:HEC401
|
3.0
|
41.4
|
1.0
|
|
C1A
|
U:HEC401
|
3.0
|
44.7
|
1.0
|
|
C4B
|
U:HEC401
|
3.1
|
34.3
|
1.0
|
|
C4D
|
U:HEC401
|
3.1
|
44.4
|
1.0
|
|
C1C
|
U:HEC401
|
3.1
|
36.1
|
1.0
|
|
C4C
|
U:HEC401
|
3.1
|
35.5
|
1.0
|
|
CHB
|
U:HEC401
|
3.4
|
36.3
|
1.0
|
|
CHD
|
U:HEC401
|
3.4
|
36.0
|
1.0
|
|
CHC
|
U:HEC401
|
3.4
|
36.2
|
1.0
|
|
CHA
|
U:HEC401
|
3.4
|
45.1
|
1.0
|
|
ND1
|
U:HIS125
|
3.7
|
20.0
|
1.0
|
|
CE
|
U:MET244
|
3.9
|
36.2
|
1.0
|
|
CG
|
U:HIS125
|
3.9
|
20.0
|
1.0
|
|
CG
|
U:MET244
|
4.0
|
35.9
|
1.0
|
|
C2B
|
U:HEC401
|
4.2
|
34.4
|
1.0
|
|
C3A
|
U:HEC401
|
4.2
|
41.4
|
1.0
|
|
C2A
|
U:HEC401
|
4.2
|
44.0
|
1.0
|
|
C3B
|
U:HEC401
|
4.2
|
35.5
|
1.0
|
|
C2D
|
U:HEC401
|
4.3
|
44.4
|
1.0
|
|
C2C
|
U:HEC401
|
4.3
|
36.1
|
1.0
|
|
C3D
|
U:HEC401
|
4.3
|
45.5
|
1.0
|
|
C3C
|
U:HEC401
|
4.3
|
35.5
|
1.0
|
|
CB
|
U:MET244
|
4.3
|
38.1
|
1.0
|
|
Iron binding site 9 out
of 10 in 9cg3
Go back to
Iron Binding Sites List in 9cg3
Iron binding site 9 out
of 10 in the Human Kidney Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Human Kidney Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
V:Fe401
b:3.5
occ:1.00
|
FE
|
V:HEM401
|
0.0
|
3.5
|
1.0
|
|
ND
|
V:HEM401
|
1.9
|
5.9
|
1.0
|
|
NA
|
V:HEM401
|
2.0
|
4.2
|
1.0
|
|
NC
|
V:HEM401
|
2.1
|
6.7
|
1.0
|
|
NB
|
V:HEM401
|
2.1
|
3.5
|
1.0
|
|
NE2
|
V:HIS83
|
2.2
|
22.2
|
1.0
|
|
NE2
|
V:HIS182
|
2.2
|
7.0
|
1.0
|
|
C4D
|
V:HEM401
|
2.9
|
6.3
|
1.0
|
|
C1D
|
V:HEM401
|
2.9
|
5.0
|
1.0
|
|
C1A
|
V:HEM401
|
3.0
|
11.5
|
1.0
|
|
C4A
|
V:HEM401
|
3.0
|
4.8
|
1.0
|
|
C4C
|
V:HEM401
|
3.0
|
6.2
|
1.0
|
|
CD2
|
V:HIS83
|
3.1
|
26.9
|
1.0
|
|
C1B
|
V:HEM401
|
3.1
|
5.3
|
1.0
|
|
C4B
|
V:HEM401
|
3.1
|
2.4
|
1.0
|
|
CE1
|
V:HIS182
|
3.1
|
2.2
|
1.0
|
|
C1C
|
V:HEM401
|
3.1
|
2.2
|
1.0
|
|
CD2
|
V:HIS182
|
3.1
|
5.4
|
1.0
|
|
CE1
|
V:HIS83
|
3.2
|
30.3
|
1.0
|
|
CHA
|
V:HEM401
|
3.3
|
10.7
|
1.0
|
|
CHD
|
V:HEM401
|
3.4
|
4.4
|
1.0
|
|
CHB
|
V:HEM401
|
3.5
|
3.2
|
1.0
|
|
CHC
|
V:HEM401
|
3.5
|
2.2
|
1.0
|
|
C2D
|
V:HEM401
|
4.1
|
2.2
|
1.0
|
|
C3D
|
V:HEM401
|
4.1
|
8.5
|
1.0
|
|
C2A
|
V:HEM401
|
4.2
|
7.4
|
1.0
|
|
ND1
|
V:HIS182
|
4.2
|
7.6
|
1.0
|
|
C3A
|
V:HEM401
|
4.2
|
6.0
|
1.0
|
|
CG
|
V:HIS83
|
4.2
|
24.3
|
1.0
|
|
CG
|
V:HIS182
|
4.2
|
2.2
|
1.0
|
|
ND1
|
V:HIS83
|
4.3
|
28.5
|
1.0
|
|
C3C
|
V:HEM401
|
4.3
|
3.5
|
1.0
|
|
C2C
|
V:HEM401
|
4.3
|
2.2
|
1.0
|
|
C2B
|
V:HEM401
|
4.3
|
2.2
|
1.0
|
|
C3B
|
V:HEM401
|
4.3
|
5.6
|
1.0
|
|
CA
|
V:GLY130
|
4.7
|
6.4
|
1.0
|
|
NE2
|
V:GLN44
|
4.8
|
28.4
|
1.0
|
|
Iron binding site 10 out
of 10 in 9cg3
Go back to
Iron Binding Sites List in 9cg3
Iron binding site 10 out
of 10 in the Human Kidney Respiratory Complex III
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Human Kidney Respiratory Complex III within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
V:Fe402
b:2.6
occ:1.00
|
FE
|
V:HEM402
|
0.0
|
2.6
|
1.0
|
|
NB
|
V:HEM402
|
2.0
|
6.7
|
1.0
|
|
NC
|
V:HEM402
|
2.0
|
2.2
|
1.0
|
|
ND
|
V:HEM402
|
2.0
|
2.2
|
1.0
|
|
NA
|
V:HEM402
|
2.0
|
4.5
|
1.0
|
|
NE2
|
V:HIS196
|
2.1
|
2.2
|
1.0
|
|
CD2
|
V:HIS196
|
2.7
|
6.5
|
1.0
|
|
NE2
|
V:HIS97
|
2.7
|
8.9
|
1.0
|
|
C1C
|
V:HEM402
|
3.0
|
6.2
|
1.0
|
|
C4B
|
V:HEM402
|
3.0
|
5.5
|
1.0
|
|
C4D
|
V:HEM402
|
3.0
|
6.0
|
1.0
|
|
C1B
|
V:HEM402
|
3.1
|
4.8
|
1.0
|
|
C4A
|
V:HEM402
|
3.1
|
2.2
|
1.0
|
|
C1A
|
V:HEM402
|
3.1
|
6.7
|
1.0
|
|
C4C
|
V:HEM402
|
3.1
|
6.0
|
1.0
|
|
C1D
|
V:HEM402
|
3.1
|
5.9
|
1.0
|
|
CE1
|
V:HIS196
|
3.2
|
7.3
|
1.0
|
|
CD2
|
V:HIS97
|
3.3
|
5.7
|
1.0
|
|
CHA
|
V:HEM402
|
3.4
|
7.2
|
1.0
|
|
CHC
|
V:HEM402
|
3.4
|
5.7
|
1.0
|
|
CHB
|
V:HEM402
|
3.4
|
2.2
|
1.0
|
|
CHD
|
V:HEM402
|
3.4
|
5.8
|
1.0
|
|
CG
|
V:HIS196
|
3.9
|
6.7
|
1.0
|
|
CE1
|
V:HIS97
|
3.9
|
4.0
|
1.0
|
|
ND1
|
V:HIS196
|
4.1
|
6.3
|
1.0
|
|
C2C
|
V:HEM402
|
4.3
|
2.2
|
1.0
|
|
C2B
|
V:HEM402
|
4.3
|
2.2
|
1.0
|
|
C3B
|
V:HEM402
|
4.3
|
5.9
|
1.0
|
|
C3A
|
V:HEM402
|
4.3
|
5.7
|
1.0
|
|
C3D
|
V:HEM402
|
4.3
|
6.3
|
1.0
|
|
C2D
|
V:HEM402
|
4.3
|
2.2
|
1.0
|
|
C3C
|
V:HEM402
|
4.3
|
2.2
|
1.0
|
|
C2A
|
V:HEM402
|
4.3
|
6.3
|
1.0
|
|
CG
|
V:HIS97
|
4.5
|
2.2
|
1.0
|
|
ND1
|
V:HIS97
|
4.8
|
4.4
|
1.0
|
|
Reference:
Z.Zhang,
M.Lyu.
Human Kidney Respiratory Complex III To Be Published.
Page generated: Sat Aug 23 02:57:07 2025
|
