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Iron in PDB, part 307 (files: 12241-12280), PDB 9evv-9fzz

Experimental structures of coordination spheres of Iron (Fe) in bioorganic molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius around Iron atoms. PDB files: 12241-12280 (PDB 9evv-9fzz).
  1. 9evv (Fe: 8) - HIS579LEU Variant of L-Arabinonate Dehydratase Co-Crystallized with 2- Oxobutyrate
    Other atoms: Mg (4);
  2. 9f0f (Fe: 2) - Coproporphyrin III - Lmcpfc Wt Complex Soaked with FE2+ and Anomalous Densities
    Other atoms: Cl (1);
  3. 9f0g (Fe: 1) - Lmcpfc H182A Variant in Complex with Iron Coproporhyrin III
    Other atoms: Ca (1);
  4. 9f29 (Fe: 1) - Pyrococcus Abyssi Pold in Complex with RPA2 Winged-Helix Domain Class 1 (Composite Map)
    Other atoms: Zn (3);
  5. 9f2a (Fe: 1) - Pyrococcus Abyssi Pold in Complex with RPA2 Winged-Helix Domain Class 2 (Composite Map)
    Other atoms: Zn (3);
  6. 9f46 (Fe: 24) - Crystal Structure of Apo-[Fefe]-Hydrogenase CBA5H From Clostridium Beijerinckii
    Other atoms: Cl (12); Zn (2);
  7. 9f47 (Fe: 28) - Crystal Structure of [Fefe]-Hydrogenase CBA5H From Clostridium Beijerinckii
    Other atoms: Zn (2); Cl (10);
  8. 9f6d (Fe: 4) - Human Dna Polymerase Epsilon Bound to Dna and Pcna (Open Conformation)
    Other atoms: Mg (1);
  9. 9f6e (Fe: 4) - Human Dna Polymerase Epsilon Bound to Dna and Pcna (Ajar Conformation)
  10. 9f6f (Fe: 4) - Human Dna Polymerase Epsilon Bound to Dna and Pcna (Closed Conformation)
  11. 9f6i (Fe: 4) - Human Dna Polymerase Epsilon Bound to T-C Mismatched Dna (Post- Insertion State)
    Other atoms: Ca (1);
  12. 9f6j (Fe: 4) - Human Dna Polymerase Epsilon Bound to T-C Mismatched Dna (Polymerase Arrest State)
  13. 9f6k (Fe: 4) - Human Dna Polymerase Epsilon Bound to T-C Mismatched Dna (Frayed Substrate State)
  14. 9f6l (Fe: 4) - Human Dna Polymerase Epsilon Bound to T-C Mismatched Dna (Mismatch Excision State)
    Other atoms: Ca (2);
  15. 9fbk (Fe: 2) - Diheme Cytochrome C KUSTD1711 From Kuenenia Stuttgartiensis, Without Glycerol Cryoprotectant
    Other atoms: Ca (5);
  16. 9fdj (Fe: 12) - Crystal Structure of the Nuoef Variant R66G (Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions (Short Soak)
    Other atoms: Cl (4); Na (8);
  17. 9fdk (Fe: 12) - Crystal Structure of Oxidized Nuoef Variant R66G(Nuof) From Aquifex Aeolicus
    Other atoms: Cl (3); Na (7);
  18. 9fdv (Fe: 12) - Crystal Structure of Reduced Nuoef Variant R66G(Nuof) From Aquifex Aeolicus
    Other atoms: Na (16); Cl (3);
  19. 9fe0 (Fe: 12) - Crystal Structure of Reduced Nuoef Variant R66G(Nuof) From Aquifex Aeolicus Bound to Nad+
    Other atoms: Na (9); Cl (6);
  20. 9fe5 (Fe: 12) - Crystal Structure of Nuoef Variant R66G(Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions After 10 Min Soaking
    Other atoms: Na (6); Cl (2);
  21. 9fe7 (Fe: 12) - Crystal Structure of Oxidized Nuoef Variant P228R(Nuof) From Aquifex Aeolicus
    Other atoms: Na (11); Cl (3);
  22. 9fe8 (Fe: 12) - Crystal Structure of Reduced Nuoef Variant P228R(Nuof) From Aquifex Aeolicus
    Other atoms: Na (8);
  23. 9fea (Fe: 12) - Crystal Structure of Reduced Nuoef Variant P228R(Nuof) From Aquifex Aeolicus Bound to Nad+
    Other atoms: Na (14); Cl (2);
  24. 9fhb (Fe: 2) - Cryo-Em Structure of Human CD163 SRCR2-4 in Complex with Haptoglobin- Hemoglobin
    Other atoms: Ca (2);
  25. 9fif (Fe: 12) - Crystal Structure of Nuoef Variant P228R(Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions
    Other atoms: Na (7);
  26. 9fih (Fe: 12) - Crystal Structure of Nuoef Variant P228R(Nuof) From Aquifex Aeolicus Bound to Nadh Under Anoxic Conditions After 10 Min Soaking
    Other atoms: Na (10);
  27. 9fii (Fe: 12) - Crystal Structure of Oxidized Nuoef Variant E222K(Nuof) From Aquifex Aeolicus
    Other atoms: Cl (5); Na (9);
  28. 9fij (Fe: 12) - Crystal Structure of Reduced Nuoef Variant E222K(Nuof) From Aquifex Aeolicus
    Other atoms: Na (15); Cl (7);
  29. 9fil (Fe: 12) - Crystal Structure of Reduced Nuoef Variant E222K(Nuof) From Aquifex Aeolicus Bound to Nad+
    Other atoms: Na (10); Cl (3);
  30. 9fka (Fe: 3) - Cryo-Em Structure of the Reduced Cytochrome Bd Oxidase From M. Tuberculosis
  31. 9fmu (Fe: 2) - Cryo-Em Structure of Human CD163 SRCR1-9 in Complex with Haptoglobin- Hemoglobin
    Other atoms: Ca (3);
  32. 9fno (Fe: 2) - Cryo-Em Structure of Human CD163 SRCR1-9 in Complex with Haptoglobin- Hemoglobin
    Other atoms: Ca (4);
  33. 9fso (Fe: 4) - Human Rna Polymerase III Class III Open Pre-Initiation Complex 1 (OC1)
    Other atoms: Mg (1); Zn (9);
  34. 9fsp (Fe: 4) - Rna Polymerase III Class III Open Pre-Initation Complex 2 (OC2)
    Other atoms: Zn (9); Mg (1);
  35. 9fsq (Fe: 4) - Rna Polymerase III Class III Melting Pre-Initiation Complex (Mc)
    Other atoms: Mg (1); Zn (9);
  36. 9fsr (Fe: 4) - Rna Polymerase III Class III Open Mini Pre-Initiation Complex 1 (OC1- Mini)
    Other atoms: Zn (9); Mg (1);
  37. 9fss (Fe: 4) - Rna Polymerase III Class III Open Mini Pre-Initiation Complex 2 (OC2- Mini)
    Other atoms: Mg (1); Zn (9);
  38. 9fu0 (Fe: 12) - CIII2/Civ Respiratory Chain Supercomplex From Mycobacterium Smegmatis
    Other atoms: Cu (3); Ca (1); Mg (1);
  39. 9fzy (Fe: 28) - Structure of Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase (Codh/Acs) in Complex with Corrinoid Iron-Sulfur Protein (Cofesp) From Clostridium Autoethanogenum (Composite Structure, Class 3A)
    Other atoms: Co (1); Ni (4);
  40. 9fzz (Fe: 28) - Structure of Carbon Monoxide Dehydrogenase/Acetyl-Coa Synthase (Codh/Acs) in Complex with Corrinoid Iron-Sulfur Protein (Cofesp) From Clostridium Autoethanogenum (Composite Structure, Class 3B)
    Other atoms: Ni (4); Co (1);
Page generated: Tue Feb 25 10:02:20 2025

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