Iron in PDB 1v5h: Crystal Structure of Human Cytoglobin (Ferric Form)

The structure of Crystal Structure of Human Cytoglobin (Ferric Form), PDB code: 1v5h was solved by H.Sugimoto, M.Makino, H.Sawai, N.Kawada, K.Yoshizato, Y.Shiro, Riken Structural Genomics/Proteomics Initiative (Rsgi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 2.40
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	74.401, 74.401, 59.634, 90.00, 90.00, 120.00
R / Rfree (%)	24.8 / 25

The binding sites of Iron atom in the Crystal Structure of Human Cytoglobin (Ferric Form) (pdb code 1v5h). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Human Cytoglobin (Ferric Form), PDB code: 1v5h:

Iron binding site 1 out of 1 in the Crystal Structure of Human Cytoglobin (Ferric Form)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Human Cytoglobin (Ferric Form) within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe191 b:46.3 occ:1.00 FE A:HEM191 0.0 46.3 1.0 ND A:HEM191 2.0 38.4 1.0 NB A:HEM191 2.0 43.6 1.0 NE2 A:HIS113 2.1 42.2 1.0 NA A:HEM191 2.1 46.2 1.0 NE2 A:HIS81 2.2 44.8 1.0 NC A:HEM191 2.2 46.4 1.0 C4D A:HEM191 2.9 45.3 1.0 C1A A:HEM191 3.0 38.0 1.0 CD2 A:HIS113 3.0 37.9 1.0 C4B A:HEM191 3.1 50.0 1.0 C1D A:HEM191 3.1 47.0 1.0 CD2 A:HIS81 3.1 48.7 1.0 C1B A:HEM191 3.1 43.8 1.0 CE1 A:HIS113 3.1 40.2 1.0 C1C A:HEM191 3.1 46.6 1.0 CE1 A:HIS81 3.2 42.6 1.0 C4A A:HEM191 3.2 41.7 1.0 C4C A:HEM191 3.2 46.2 1.0 CHA A:HEM191 3.3 44.9 1.0 CHC A:HEM191 3.4 45.4 1.0 CHD A:HEM191 3.5 45.7 1.0 CHB A:HEM191 3.6 46.3 1.0 CG A:HIS113 4.2 55.2 1.0 C3D A:HEM191 4.2 47.6 1.0 ND1 A:HIS113 4.2 48.3 1.0 C2D A:HEM191 4.3 48.5 1.0 CG A:HIS81 4.3 47.1 1.0 ND1 A:HIS81 4.3 54.2 1.0 C2A A:HEM191 4.3 45.6 1.0 C3B A:HEM191 4.3 49.1 1.0 C2B A:HEM191 4.3 40.4 1.0 C2C A:HEM191 4.4 55.3 1.0 C3A A:HEM191 4.4 45.7 1.0 C3C A:HEM191 4.5 44.8 1.0 CG2 A:VAL85 4.7 50.2 1.0

H.Sugimoto, M.Makino, H.Sawai, N.Kawada, K.Yoshizato, Y.Shiro. Structural Basis of Human Cytoglobin For Ligand Binding. J.Mol.Biol. V. 339 873 2004.
ISSN: ISSN 0022-2836
PubMed: 15165856
DOI: 10.1016/J.JMB.2004.04.024