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Iron in PDB 8euk: Cytochrome P450TERP (CYP108A1) Bound to Ethylene Glycol

Protein crystallography data

The structure of Cytochrome P450TERP (CYP108A1) Bound to Ethylene Glycol, PDB code: 8euk was solved by J.A.Gable, A.H.Follmer, T.L.Poulos, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 59.52 / 1.98
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 68.73, 68.73, 457.039, 90, 90, 120
R / Rfree (%) 18 / 20.6

Iron Binding Sites:

The binding sites of Iron atom in the Cytochrome P450TERP (CYP108A1) Bound to Ethylene Glycol (pdb code 8euk). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Cytochrome P450TERP (CYP108A1) Bound to Ethylene Glycol, PDB code: 8euk:

Iron binding site 1 out of 1 in 8euk

Go back to Iron Binding Sites List in 8euk
Iron binding site 1 out of 1 in the Cytochrome P450TERP (CYP108A1) Bound to Ethylene Glycol


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome P450TERP (CYP108A1) Bound to Ethylene Glycol within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:22.8
occ:1.00
FE A:HEM501 0.0 22.8 1.0
ND A:HEM501 1.9 24.9 1.0
NA A:HEM501 1.9 19.7 1.0
NC A:HEM501 2.0 18.8 1.0
NB A:HEM501 2.1 19.9 1.0
SG A:CYS377 2.4 26.9 1.0
O2 A:EDO512 2.6 37.7 1.0
C1D A:HEM501 2.9 17.6 1.0
C4D A:HEM501 3.0 17.8 1.0
C1A A:HEM501 3.0 25.3 1.0
C4A A:HEM501 3.0 27.4 1.0
C4C A:HEM501 3.0 21.5 1.0
C1B A:HEM501 3.1 19.5 1.0
C4B A:HEM501 3.1 17.9 1.0
C1C A:HEM501 3.1 22.4 1.0
CHD A:HEM501 3.4 21.4 1.0
CB A:CYS377 3.4 26.1 1.0
CHB A:HEM501 3.4 19.8 1.0
CHA A:HEM501 3.4 23.9 1.0
CHC A:HEM501 3.5 20.8 1.0
C2 A:EDO512 3.8 44.7 1.0
CA A:CYS377 4.0 26.6 1.0
C3A A:HEM501 4.2 21.3 1.0
C2A A:HEM501 4.2 19.1 1.0
C2D A:HEM501 4.2 23.3 1.0
C3C A:HEM501 4.2 19.4 1.0
C3D A:HEM501 4.2 20.6 1.0
C2C A:HEM501 4.3 17.2 1.0
O A:ALA267 4.3 24.8 1.0
C2B A:HEM501 4.3 17.7 1.0
C3B A:HEM501 4.4 17.3 1.0
CB A:ALA267 4.5 23.6 1.0
O1 A:EDO512 4.6 57.8 1.0
C A:CYS377 4.6 24.5 1.0
N A:GLY379 4.7 25.5 1.0
N A:LEU378 4.7 25.8 1.0
C1 A:EDO512 4.8 56.0 1.0
C A:ALA267 4.9 23.8 1.0

Reference:

J.A.Gable, T.L.Poulos, A.H.Follmer. Cooperative Substrate Binding Controls Catalysis in Bacterial Cytochrome P450TERP (CYP108A1). J.Am.Chem.Soc. 2023.
ISSN: ESSN 1520-5126
PubMed: 36779970
DOI: 10.1021/JACS.2C12388
Page generated: Sat Aug 10 02:25:27 2024

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