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Iron in PDB 8f9j: H64A Swmb-Prno Adduct

Protein crystallography data

The structure of H64A Swmb-Prno Adduct, PDB code: 8f9j was solved by V.E.Herrera, L.M.Thomas, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.75
Space group P 6
Cell size a, b, c (Å), α, β, γ (°) 90.59, 90.59, 45.376, 90, 90, 120
R / Rfree (%) 16.4 / 19.2

Iron Binding Sites:

The binding sites of Iron atom in the H64A Swmb-Prno Adduct (pdb code 8f9j). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the H64A Swmb-Prno Adduct, PDB code: 8f9j:

Iron binding site 1 out of 1 in 8f9j

Go back to Iron Binding Sites List in 8f9j
Iron binding site 1 out of 1 in the H64A Swmb-Prno Adduct


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of H64A Swmb-Prno Adduct within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe200

b:10.7
occ:1.00
FE A:HEM200 0.0 10.7 1.0
N1 A:XEM201 1.9 12.3 1.0
NA A:HEM200 1.9 9.7 1.0
ND A:HEM200 2.0 9.3 1.0
NE2 A:HIS93 2.0 9.4 1.0
NC A:HEM200 2.0 9.3 1.0
NB A:HEM200 2.1 9.3 1.0
O1 A:XEM201 2.7 13.4 1.0
C3 A:XEM201 2.9 14.0 1.0
C1D A:HEM200 3.0 10.0 1.0
CE1 A:HIS93 3.0 10.8 1.0
C4D A:HEM200 3.0 9.8 1.0
C4B A:HEM200 3.0 9.1 1.0
C1A A:HEM200 3.0 10.5 1.0
C4A A:HEM200 3.0 9.7 1.0
C1C A:HEM200 3.0 8.2 1.0
C1B A:HEM200 3.0 8.8 1.0
CD2 A:HIS93 3.1 10.0 1.0
C4C A:HEM200 3.1 8.8 1.0
CHC A:HEM200 3.4 8.9 1.0
CHD A:HEM200 3.4 9.9 1.0
CHA A:HEM200 3.4 9.4 1.0
CHB A:HEM200 3.4 9.9 1.0
ND1 A:HIS93 4.1 9.5 1.0
CG A:HIS93 4.2 9.2 1.0
C2A A:HEM200 4.2 11.2 1.0
C3A A:HEM200 4.2 11.5 1.0
C2 A:XEM201 4.2 14.1 1.0
C2D A:HEM200 4.2 10.6 1.0
C2C A:HEM200 4.3 8.7 1.0
C3D A:HEM200 4.3 11.2 1.0
C3C A:HEM200 4.3 9.7 1.0
C3B A:HEM200 4.3 8.7 1.0
C2B A:HEM200 4.3 9.2 1.0
C1 A:XEM201 4.5 14.6 1.0
O A:HOH361 4.9 15.8 1.0
CD1 A:LEU89 5.0 18.0 1.0

Reference:

V.E.Herrera, T.P.Charles, T.G.Scott, K.Y.Prather, N.T.Nguyen, C.D.Sohl, L.M.Thomas, G.B.Richter-Addo. Insights Into Nitrosoalkane Binding to Myoglobin Provided By Crystallography of Wild-Type and Distal Pocket Mutant Derivatives. Biochemistry V. 62 1406 2023.
ISSN: ISSN 0006-2960
PubMed: 37011611
DOI: 10.1021/ACS.BIOCHEM.2C00725
Page generated: Sat Aug 10 03:35:38 2024

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