Iron in PDB 9e4r: Escherichia Coli Encapsulin-Associated Dyp Peroxidase

The binding sites of Iron atom in the Escherichia Coli Encapsulin-Associated Dyp Peroxidase (pdb code 9e4r). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Escherichia Coli Encapsulin-Associated Dyp Peroxidase, PDB code: 9e4r:

Iron binding site 1 out of 1 in the Escherichia Coli Encapsulin-Associated Dyp Peroxidase


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Escherichia Coli Encapsulin-Associated Dyp Peroxidase within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe401 b:51.0 occ:1.00 FE A:HEM401 0.0 51.0 1.0 NC A:HEM401 2.0 51.0 1.0 NA A:HEM401 2.0 51.0 1.0 NB A:HEM401 2.0 51.0 1.0 ND A:HEM401 2.0 51.0 1.0 NE2 A:HIS225 2.1 85.0 1.0 C1C A:HEM401 3.1 51.0 1.0 C1D A:HEM401 3.1 51.0 1.0 C4D A:HEM401 3.1 51.0 1.0 C4A A:HEM401 3.1 51.0 1.0 C4B A:HEM401 3.1 51.0 1.0 C1A A:HEM401 3.1 51.0 1.0 C4C A:HEM401 3.1 51.0 1.0 C1B A:HEM401 3.1 51.0 1.0 CE1 A:HIS225 3.1 85.0 1.0 CD2 A:HIS225 3.2 85.0 1.0 CHA A:HEM401 3.4 51.0 1.0 CHC A:HEM401 3.4 51.0 1.0 CHD A:HEM401 3.4 51.0 1.0 CHB A:HEM401 3.4 51.0 1.0 NH1 A:ARG242 4.1 79.6 1.0 ND1 A:HIS225 4.2 85.0 1.0 C2D A:HEM401 4.3 51.0 1.0 C3D A:HEM401 4.3 51.0 1.0 C3A A:HEM401 4.3 51.0 1.0 C2A A:HEM401 4.3 51.0 1.0 C2C A:HEM401 4.3 51.0 1.0 C2B A:HEM401 4.3 51.0 1.0 CG A:HIS225 4.3 85.0 1.0 C3B A:HEM401 4.3 51.0 1.0 C3C A:HEM401 4.3 51.0 1.0 ND2 A:ASN244 4.7 71.8 1.0 CZ A:ARG242 4.8 79.6 1.0 CD A:ARG242 5.0 79.6 1.0

N.C.Ubilla-Rodriguez, M.P.Andreas, T.W.Giessen. Structural and Biochemical Characterization of A Widespread Enterobacterial Peroxidase Encapsulin. Biorxiv 2024.
ISSN: ISSN 2692-8205
PubMed: 39651212
DOI: 10.1101/2024.11.27.625667