Iron in PDB 6ymy: Cytochrome C Oxidase From Saccharomyces Cerevisiae

All present enzymatic activity of Cytochrome C Oxidase From Saccharomyces Cerevisiae:
1.9.3.1;

The structure of Cytochrome C Oxidase From Saccharomyces Cerevisiae also contains other interesting chemical elements:

Zinc	(Zn)	1 atom
Copper	(Cu)	3 atoms

The binding sites of Iron atom in the Cytochrome C Oxidase From Saccharomyces Cerevisiae (pdb code 6ymy). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Cytochrome C Oxidase From Saccharomyces Cerevisiae, PDB code: 6ymy:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Cytochrome C Oxidase From Saccharomyces Cerevisiae


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Cytochrome C Oxidase From Saccharomyces Cerevisiae within 5.0Å range: probe atom residue distance (Å) B Occ a:Fe602 b:100.0 occ:1.00 FE a:HEA602 0.0 100.0 1.0 ND a:HEA602 1.9 100.0 1.0 NB a:HEA602 2.0 100.0 1.0 NA a:HEA602 2.0 100.0 1.0 NC a:HEA602 2.0 100.0 1.0 NE2 a:HIS378 2.7 96.6 1.0 NE2 a:HIS62 2.7 95.7 1.0 C4D a:HEA602 2.9 100.0 1.0 C1D a:HEA602 3.0 100.0 1.0 C1B a:HEA602 3.0 100.0 1.0 C1A a:HEA602 3.0 100.0 1.0 C4C a:HEA602 3.0 100.0 1.0 C4B a:HEA602 3.0 100.0 1.0 C4A a:HEA602 3.1 100.0 1.0 C1C a:HEA602 3.1 100.0 1.0 CHD a:HEA602 3.3 100.0 1.0 CHA a:HEA602 3.3 100.0 1.0 CHB a:HEA602 3.4 100.0 1.0 CHC a:HEA602 3.4 100.0 1.0 CE1 a:HIS378 3.5 96.6 1.0 CE1 a:HIS62 3.6 95.7 1.0 CD2 a:HIS62 3.6 95.7 1.0 CD2 a:HIS378 3.6 96.6 1.0 C3D a:HEA602 4.2 100.0 1.0 C2D a:HEA602 4.2 100.0 1.0 C2B a:HEA602 4.2 100.0 1.0 C2A a:HEA602 4.3 100.0 1.0 C3B a:HEA602 4.3 100.0 1.0 C3C a:HEA602 4.3 100.0 1.0 C3A a:HEA602 4.3 100.0 1.0 C2C a:HEA602 4.3 100.0 1.0 ND1 a:HIS378 4.5 96.6 1.0 CG a:HIS378 4.6 96.6 1.0 ND1 a:HIS62 4.6 95.7 1.0 CG a:HIS62 4.6 95.7 1.0 CE2 a:PHE377 4.8 94.8 1.0

Iron binding site 2 out of 2 in the Cytochrome C Oxidase From Saccharomyces Cerevisiae


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Cytochrome C Oxidase From Saccharomyces Cerevisiae within 5.0Å range: probe atom residue distance (Å) B Occ a:Fe603 b:98.5 occ:1.00 FE a:HEA603 0.0 98.5 1.0 ND a:HEA603 1.9 98.5 1.0 NB a:HEA603 2.0 98.5 1.0 NA a:HEA603 2.0 98.5 1.0 NC a:HEA603 2.0 98.5 1.0 NE2 a:HIS376 2.8 93.2 1.0 C4D a:HEA603 2.9 98.5 1.0 C1D a:HEA603 3.0 98.5 1.0 C1B a:HEA603 3.0 98.5 1.0 C1A a:HEA603 3.0 98.5 1.0 C4C a:HEA603 3.0 98.5 1.0 C4B a:HEA603 3.0 98.5 1.0 C4A a:HEA603 3.0 98.5 1.0 C1C a:HEA603 3.1 98.5 1.0 CHD a:HEA603 3.3 98.5 1.0 CHA a:HEA603 3.3 98.5 1.0 CHB a:HEA603 3.3 98.5 1.0 CHC a:HEA603 3.4 98.5 1.0 CD2 a:HIS376 3.7 93.2 1.0 CE1 a:HIS376 3.7 93.2 1.0 CU a:CU601 4.2 0.2 1.0 C3D a:HEA603 4.2 98.5 1.0 C2B a:HEA603 4.2 98.5 1.0 C2D a:HEA603 4.2 98.5 1.0 C2A a:HEA603 4.3 98.5 1.0 C3B a:HEA603 4.3 98.5 1.0 C3A a:HEA603 4.3 98.5 1.0 C3C a:HEA603 4.3 98.5 1.0 C2C a:HEA603 4.3 98.5 1.0 CE1 a:HIS241 4.8 98.4 1.0 ND1 a:HIS376 4.8 93.2 1.0 CG a:HIS376 4.9 93.2 1.0 CG1 a:VAL244 5.0 98.3 1.0

J.Berndtsson, A.Aufschnaiter, S.Rathore, L.Marin-Buera, H.Dawitz, J.Diessl, V.Kohler, A.Barrientos, S.Buttner, F.Fontanesi, M.Ott. Mitochondrial Respiratory Supercomplex Formation Improves Bioenergetics and Confers A Selectable Fitness Advantage To Be Published.