Iron in PDB, part 238 (files: 9481-9520),
PDB 6ydi-6z9g
Experimental structures of coordination spheres of Iron (Fe) in bioorganic
molecules from X-Ray and NMR experiments. Coordination spheres were calculated with 5.0 Angstroms radius
around Iron atoms. PDB files: 9481-9520 (PDB 6ydi-6z9g).
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6ydi (Fe: 2) - Xfel Structure of the Soluble Methane Monooxygenase Hydroxylase and Regulatory Subunit Complex, From Methylosinus Trichosporium OB3B, Diferrous State
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6ydu (Fe: 2) - Xfel Structure of the Soluble Methane Monooxygenase Hydroxylase and Regulatory Subunit Complex, From Methylosinus Trichosporium OB3B, Reoxidized Diferric State, 10S O2 Exposure.
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6yez (Fe: 14) - Plant Psi-Ferredoxin-Plastocyanin Supercomplex
Other atoms:
Mg (157);
Ca (2);
Cu (1);
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6yf4 (Fe: 40) - [Fefe]-Hydrogenase I From Clostridium Pasteurianum (Cpi), Variant E279D
Other atoms:
Mg (3);
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6yj4 (Fe: 28) - Structure of Yarrowia Lipolytica Complex I at 2.7 A
Other atoms:
Zn (1);
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6yka (Fe: 1) - Asymmetric [Fe]-Hydrogenase From Methanolacinia Paynteri Apo and in Complex with Fegp at 2.1-A Resolution
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6ymx (Fe: 12) - CIII2/Civ Respiratory Supercomplex From Saccharomyces Cerevisiae
Other atoms:
Zn (1);
Cu (3);
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6ymy (Fe: 2) - Cytochrome C Oxidase From Saccharomyces Cerevisiae
Other atoms:
Zn (1);
Cu (3);
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6yom (Fe: 2) - Crystal Structure of Tetrameric Human D137N-SAMHD1 (Residues 109-626) with Xtp, Datp, Dcmpnpp, Mn and Mg
Other atoms:
Mg (4);
Mn (2);
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6yp7 (Fe: 4) - Psii-Lhcii C2S2 Supercomplex From Pisum Sativum Grown in High Light Conditions
Other atoms:
Mg (198);
Mn (8);
Ca (2);
Cl (4);
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6ypv (Fe: 1) - Alpha-Ketoglutarate-Dependent Dioxygenase Alkb in Complex with Fe and Akg After Oxygen Exposure Using Ft-Ssx Methods
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6yr4 (Fe: 6) - Dye-Type Peroxidase Dtpb in the Ferryl State: Spectroscopically Validated Composite Structure
Other atoms:
Mg (2);
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6yrc (Fe: 6) - Spectroscopically-Validated Structure of Dtpb From Streptomyces Lividans in the Ferric State
Other atoms:
Mg (5);
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6yrd (Fe: 6) - Sfx Structure of Dye-Type Peroxidase Dtpb in the Ferryl State
Other atoms:
Mg (2);
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6yrj (Fe: 6) - Sfx Structure of Dye-Type Peroxidase Dtpb in the Ferric State
Other atoms:
Mg (1);
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6ytt (Fe: 28) - Co-Dehydrogenase/Acetyl-Coa Synthase (Codh/Acs) From Clostridium Autoethanogenum at 3.0-A Resolution
Other atoms:
F (9);
Ni (6);
Na (6);
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6yu9 (Fe: 40) - Co-Dehydrogenase Homodimer From Clostridium Autoethanogenum at 1.90-A Resolution
Other atoms:
Ni (4);
Cl (1);
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6yua (Fe: 20) - Co-Dehydrogenase Coupled to the N-Terminal Domain of the Acetyl-Coa Synthase From Clostridium Autoethanogenum Isolated After Tryptic Digestion.
Other atoms:
Ni (2);
Mg (4);
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6yvw (Fe: 1) - Hif Prolyl Hydroxylase 2 (PHD2/ EGLN1) in Complex with Monocyclic Bb- 328
Other atoms:
Br (1);
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6yw0 (Fe: 1) - Lysine-N,N-Dimethylated Hif Prolyl Hydroxylase 2 (PHD2/ EGLN1) in Complex with Bb-287
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6yxr (Fe: 12) - Dunaliella Minimal Photosystem I
Other atoms:
Mg (145);
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6yy3 (Fe: 2) - Xfel Structure of the Soluble Methane Monooxygenase Hydroxylase and Regulatory Subunit Complex, From Methylosinus Trichosporium OB3B, T=0 Diferrous State Prior to Oxygen Activation
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6z02 (Fe: 1) - Photosynthetic Reaction Center From Rhodobacter Sphaeroides Strain Rv in Surfo Crystallization
Other atoms:
Mg (4);
K (1);
Na (1);
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6z1j (Fe: 1) - Photosynthetic Reaction Center From Rhodobacter Sphaeroides Strain Rv Lsp Co-Crystallization with Spheroidene
Other atoms:
Mg (4);
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6z1m (Fe: 3) - Structure of An Ancestral Glycosidase (Family 1) Bound to Heme
Other atoms:
Mg (1);
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6z27 (Fe: 1) - Photosynthetic Reaction Center From Rhodobacter Sphaeroides Strain Rv Lcp Crystallization
Other atoms:
Mg (4);
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6z4r (Fe: 1) - Sperm Whale Myoglobin Mutant (H64V V64A) Bearing the Non-Canonical Amino Acid 3-Thienylalanine As Axial Heme Ligand
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6z4t (Fe: 1) - Sperm Whale Myoglobin Mutant (H64V V64A) Bearing the Non-Canonical Amino Acid 2-Amino-3-(Thiazol-5-Yl)Propanoic Acid As Axial Heme Ligand
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6z5r (Fe: 1) - Rc-LH1(16) Complex From Rhodopseudomonas Palustris
Other atoms:
Mg (36);
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6z5s (Fe: 1) - Rc-LH1(14)-W Complex From Rhodopseudomonas Palustris
Other atoms:
Mg (32);
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6z7r (Fe: 36) - Structure of [Nifese] Hydrogenase From Desulfovibrio Vulgaris Hildenborough Pressurized with Krypton Gas - Structure WTKR1
Other atoms:
Ni (2);
Kr (42);
Cl (2);
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6z8a (Fe: 1) - Outer Membrane Foxa in Complex with Nocardamine
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6z8j (Fe: 36) - Structure of [Nifese] Hydrogenase From Desulfovibrio Vulgaris Hildenborough Pressurized with Oxygen Gas - Structure WTO2
Other atoms:
Ni (2);
Cl (2);
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6z8m (Fe: 18) - Structure of [Nifese] Hydrogenase G491S Variant From Desulfovibrio Vulgaris Hildenborough Pressurized with Oxygen Gas - Structure G491S- O2
Other atoms:
Ni (2);
Cl (1);
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6z8o (Fe: 36) - Structure of [Nifese] Hydrogenase G491A Variant From Desulfovibrio Vulgaris Hildenborough Pressurized with Krypton Gas - Structure G491A-Kr
Other atoms:
Ni (2);
Kr (20);
Cl (2);
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6z92 (Fe: 8) - [4FE-4S]-Dependent Thiouracil Desulfidase Tuds (DUF523VCZ) Solved By Fe-Sad Phasing
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6z93 (Fe: 8) - [4FE-4S]-Dependent Thiouracil Desulfidase Tuds (DUF523VCZ)
Other atoms:
Cl (2);
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6z94 (Fe: 8) - [4FE-4S]-Dependent Thiouracil Desulfidase Tuds (DUF523VCZ)(S-Sad Data)
Other atoms:
Cl (3);
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6z96 (Fe: 8) - [4FE-4S]-Dependent Thiouracil Desulfidase Tuds (DUF523VCZ) Soaked with 4-Thiouracil (12.65 Kev, 7.125 Kev (Fe-Sad) and 6.5 Kev (S-Sad) Data)
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6z9g (Fe: 72) - Structure of [Nifese] Hydrogenase G491A Variant From Desulfovibrio Vulgaris Hildenborough Pressurized with Oxygen Gas - Structure G491A- O2
Other atoms:
Ni (4);
Cl (4);
Page generated: Mon Jul 12 13:51:13 2021
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